RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 TM4SF1P30408 202 aa12.39□□□□□ -0.43
AC004448.3-201ENST00000435953 BICDL1Q6ZP65 573 aa12.39□□□□□ -0.43
AC004448.3-201ENST00000435953 UBE3BQ7Z3V4 1068 aa12.39□□□□□ -0.43
AC004448.3-201ENST00000435953 PPP1R42Q7Z4L9 355 aa12.39□□□□□ -0.43
AC004448.3-201ENST00000435953 RPAP2Q8IXW5 612 aaPredicted RBP12.39□□□□□ -0.43
AC004448.3-201ENST00000435953 NLGN1Q8N2Q7 840 aa12.39□□□□□ -0.43
AC004448.3-201ENST00000435953 FAM89AQ96GI7 184 aa12.39□□□□□ -0.43
AC004448.3-201ENST00000435953 CCDC136Q96JN2 1154 aa12.39□□□□□ -0.43
AC004448.3-201ENST00000435953 UTP14AQ9BVJ6 771 aaKnown RBP12.39□□□□□ -0.43
AC004448.3-201ENST00000435953 LRRFIP2Q9Y608 721 aaKnown RBP12.39□□□□□ -0.43
AC004448.3-201ENST00000435953 MYH14Q7Z406 1995 aaKnown RBP12.39□□□□□ -0.43
AC004448.3-201ENST00000435953 C4BP0C0L5 1744 aa12.39□□□□□ -0.43
AC004448.3-201ENST00000435953 RREB1Q92766 1687 aa12.38□□□□□ -0.43
AC004448.3-201ENST00000435953 UBN2Q6ZU65 1347 aa12.38□□□□□ -0.43
AC004448.3-201ENST00000435953 CACNA1FO60840 1977 aa12.38□□□□□ -0.43
AC004448.3-201ENST00000435953 ATP8B2P98198 1209 aa12.38□□□□□ -0.43
AC004448.3-201ENST00000435953 NFIXQ14938 502 aa12.38□□□□□ -0.43
AC004448.3-201ENST00000435953 RTL5Q5HYW3 569 aaPredicted RBP12.38□□□□□ -0.43
AC004448.3-201ENST00000435953 B4GALNT3Q6L9W6 998 aa12.38□□□□□ -0.43
AC004448.3-201ENST00000435953 SIRT2Q8IXJ6 389 aa12.38□□□□□ -0.43
AC004448.3-201ENST00000435953 ANKRD44Q8N8A2 993 aa12.38□□□□□ -0.43
AC004448.3-201ENST00000435953 KAZALD1Q96I82 304 aa12.38□□□□□ -0.43
AC004448.3-201ENST00000435953 SUCLG2Q96I99 432 aa12.38□□□□□ -0.43
AC004448.3-201ENST00000435953 RWDD1Q9H446 243 aaPredicted RBP12.38□□□□□ -0.43
AC004448.3-201ENST00000435953 COL5A3P25940 1745 aaPredicted RBP12.37□□□□□ -0.43
AC004448.3-201ENST00000435953 TNS1Q9HBL0 1735 aaKnown RBP12.37□□□□□ -0.43
AC004448.3-201ENST00000435953 FAM177BA6PVY3 158 aa12.37□□□□□ -0.43
AC004448.3-201ENST00000435953 IGHDP01880 384 aa12.37□□□□□ -0.43
AC004448.3-201ENST00000435953 CEP85Q6P2H3 762 aa12.37□□□□□ -0.43
AC004448.3-201ENST00000435953 SYNE4Q8N205 404 aa12.37□□□□□ -0.43
AC004448.3-201ENST00000435953 NTSR2O95665 410 aa12.36□□□□□ -0.43
AC004448.3-201ENST00000435953 FOXO4P98177 505 aa12.36□□□□□ -0.43
AC004448.3-201ENST00000435953 HDAC1Q13547 482 aaPredicted RBP12.36□□□□□ -0.43
AC004448.3-201ENST00000435953 EPHA10Q5JZY3 1008 aa12.36□□□□□ -0.43
AC004448.3-201ENST00000435953 TPTE2Q6XPS3 522 aa12.36□□□□□ -0.43
AC004448.3-201ENST00000435953 PLA2G12BQ9BX93 195 aa12.36□□□□□ -0.43
AC004448.3-201ENST00000435953 NYXQ9GZU5 481 aa12.36□□□□□ -0.43
AC004448.3-201ENST00000435953 SH3TC1Q8TE82 1336 aa12.36□□□□□ -0.43
AC004448.3-201ENST00000435953 IRS4O14654 1257 aaPredicted RBP12.35□□□□□ -0.43
AC004448.3-201ENST00000435953 HSP90B1P14625 803 aaKnown RBP12.35□□□□□ -0.43
AC004448.3-201ENST00000435953 SLC10A5Q5PT55 438 aa12.35□□□□□ -0.43
AC004448.3-201ENST00000435953 NBPF5PQ86XG9 351 aaPredicted RBP12.35□□□□□ -0.43
AC004448.3-201ENST00000435953 BICC1Q9H694 974 aaKnown RBP12.35□□□□□ -0.43
AC004448.3-201ENST00000435953 CDHR2Q9BYE9 1310 aa12.35□□□□□ -0.43
AC004448.3-201ENST00000435953 SERPINB2P05120 415 aa12.34□□□□□ -0.43
AC004448.3-201ENST00000435953 CSF1RP07333 972 aa12.34□□□□□ -0.43
AC004448.3-201ENST00000435953 GTF2E1P29083 439 aaPredicted RBP12.34□□□□□ -0.43
AC004448.3-201ENST00000435953 MTX1Q13505 466 aa12.34□□□□□ -0.43
AC004448.3-201ENST00000435953 RABL6Q3YEC7 729 aaPredicted RBP12.34□□□□□ -0.43
AC004448.3-201ENST00000435953 ERFEQ4G0M1 354 aa12.34□□□□□ -0.43
AC004448.3-201ENST00000435953 LMBR1LQ6UX01 489 aa12.34□□□□□ -0.43
AC004448.3-201ENST00000435953 SLC16A10Q8TF71 515 aa12.34□□□□□ -0.43
AC004448.3-201ENST00000435953 PNMA6EA0A0J9YXQ4 647 aa12.33□□□□□ -0.44
AC004448.3-201ENST00000435953 SRGAP3O43295 1099 aa12.33□□□□□ -0.44
AC004448.3-201ENST00000435953 PDE8AO60658 829 aa12.33□□□□□ -0.44
AC004448.3-201ENST00000435953 HMMRO75330 724 aa12.33□□□□□ -0.44
AC004448.3-201ENST00000435953 HCLS1P14317 486 aaPredicted RBP12.33□□□□□ -0.44
AC004448.3-201ENST00000435953 POLA2Q14181 598 aa12.33□□□□□ -0.44
AC004448.3-201ENST00000435953 NUTM1Q86Y26 1132 aa12.33□□□□□ -0.44
AC004448.3-201ENST00000435953 SSH3Q8TE77 659 aa12.33□□□□□ -0.44
AC004448.3-201ENST00000435953 PDGFDQ9GZP0 370 aaPredicted RBP12.33□□□□□ -0.44
AC004448.3-201ENST00000435953 RGPD3A6NKT7 1758 aaPredicted RBP12.33□□□□□ -0.44
AC004448.3-201ENST00000435953 RGPD4Q7Z3J3 1758 aa12.33□□□□□ -0.44
AC004448.3-201ENST00000435953 TAF1LQ8IZX4 1826 aa12.32□□□□□ -0.44
AC004448.3-201ENST00000435953 POLRMTO00411 1230 aaKnown RBP12.32□□□□□ -0.44
AC004448.3-201ENST00000435953 DDR1Q08345 913 aa12.32□□□□□ -0.44
AC004448.3-201ENST00000435953 TTLL11Q8NHH1 800 aa12.32□□□□□ -0.44
AC004448.3-201ENST00000435953 DCTPP1Q9H773 170 aa12.32□□□□□ -0.44
AC004448.3-201ENST00000435953 CARMIL3Q8ND23 1372 aa12.31□□□□□ -0.44
AC004448.3-201ENST00000435953 MMP10P09238 476 aa12.31□□□□□ -0.44
AC004448.3-201ENST00000435953 R3HDM1Q15032 1099 aaKnown RBP12.31□□□□□ -0.44
AC004448.3-201ENST00000435953 MSL1Q68DK7 614 aa12.31□□□□□ -0.44
AC004448.3-201ENST00000435953 CENPQQ7L2Z9 268 aaPredicted RBP12.31□□□□□ -0.44
AC004448.3-201ENST00000435953 PARP3Q9Y6F1 533 aa12.31□□□□□ -0.44
AC004448.3-201ENST00000435953 KDM2BQ8NHM5 1336 aa12.31□□□□□ -0.44
AC004448.3-201ENST00000435953 NPHP1O15259 732 aa12.3□□□□□ -0.44
AC004448.3-201ENST00000435953 CTSWP56202 376 aa12.3□□□□□ -0.44
AC004448.3-201ENST00000435953 SF3B3Q15393 1217 aaKnown RBP12.3□□□□□ -0.44
AC004448.3-201ENST00000435953 PRR5LQ6MZQ0 368 aa12.3□□□□□ -0.44
AC004448.3-201ENST00000435953 SMC5Q8IY18 1101 aa12.3□□□□□ -0.44
AC004448.3-201ENST00000435953 CCDC24Q8N4L8 307 aa12.3□□□□□ -0.44
AC004448.3-201ENST00000435953 CNBD1Q8NA66 436 aa12.3□□□□□ -0.44
AC004448.3-201ENST00000435953 NLRP3Q96P20 1036 aa12.3□□□□□ -0.44
AC004448.3-201ENST00000435953 RFX5P48382 616 aaPredicted RBP12.29□□□□□ -0.44
AC004448.3-201ENST00000435953 GCC1Q96CN9 775 aa12.29□□□□□ -0.44
AC004448.3-201ENST00000435953 NOP58Q9Y2X3 529 aaKnown RBP12.29□□□□□ -0.44
AC004448.3-201ENST00000435953 CHMP3Q9Y3E7 222 aa12.29□□□□□ -0.44
AC004448.3-201ENST00000435953 NUP188Q5SRE5 1749 aa12.28□□□□□ -0.44
AC004448.3-201ENST00000435953 ARFGEF2Q9Y6D5 1785 aa12.28□□□□□ -0.44
AC004448.3-201ENST00000435953 UBR3Q6ZT12 1888 aa12.28□□□□□ -0.44
AC004448.3-201ENST00000435953 SURF6O75683 361 aaKnown RBP12.28□□□□□ -0.44
AC004448.3-201ENST00000435953 ST5P78524 1137 aa12.28□□□□□ -0.44
AC004448.3-201ENST00000435953 PTPN12Q05209 780 aaKnown RBP12.28□□□□□ -0.44
AC004448.3-201ENST00000435953 IFIT5Q13325 482 aaKnown RBP12.28□□□□□ -0.44
AC004448.3-201ENST00000435953 CCDC57Q2TAC2 916 aa12.28□□□□□ -0.44
AC004448.3-201ENST00000435953 CCDC152Q4G0S7 254 aa12.28□□□□□ -0.44
AC004448.3-201ENST00000435953 C3orf67Q6ZVT6 689 aa12.28□□□□□ -0.44
AC004448.3-201ENST00000435953 CCDC85AQ96PX6 553 aaPredicted RBP12.28□□□□□ -0.44
AC004448.3-201ENST00000435953 GREM2Q9H772 168 aa12.28□□□□□ -0.44
AC004448.3-201ENST00000435953 COPRSQ9NQ92 184 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms