RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 DPH6Q7L8W6 267 aa13.1□□□□□ -0.31
SEC16A-206ENST00000431893 IQCA1Q86XH1 822 aa13.1□□□□□ -0.31
SEC16A-206ENST00000431893 KRT222Q8N1A0 295 aa13.1□□□□□ -0.31
SEC16A-206ENST00000431893 CCDC63Q8NA47 563 aa13.1□□□□□ -0.31
SEC16A-206ENST00000431893 DYNC1I1O14576 645 aa13.1□□□□□ -0.31
SEC16A-206ENST00000431893 IGHDP01880 384 aa13.1□□□□□ -0.31
SEC16A-206ENST00000431893 CA8P35219 290 aa13.1□□□□□ -0.31
SEC16A-206ENST00000431893 AOPEPQ8N6M6 819 aa13.1□□□□□ -0.31
SEC16A-206ENST00000431893 ECM2O94769 699 aaPredicted RBP13.1□□□□□ -0.31
SEC16A-206ENST00000431893 KIAA0753Q2KHM9 967 aa13.1□□□□□ -0.31
SEC16A-206ENST00000431893 GRIPAP1Q4V328 841 aa13.1□□□□□ -0.31
SEC16A-206ENST00000431893 BBXQ8WY36 941 aaPredicted RBP13.1□□□□□ -0.31
SEC16A-206ENST00000431893 TSNARE1Q96NA8 513 aa13.1□□□□□ -0.31
SEC16A-206ENST00000431893 PRDM11Q9NQV5 511 aa13.1□□□□□ -0.31
SEC16A-206ENST00000431893 ANKRD18BA2A2Z9 1011 aa13.1□□□□□ -0.31
SEC16A-206ENST00000431893 MAP3K12Q12852 859 aa13.1□□□□□ -0.31
SEC16A-206ENST00000431893 KIF4AO95239 1232 aa13.1□□□□□ -0.31
SEC16A-206ENST00000431893 METAP2P50579 478 aaKnown RBP eCLIP13.1□□□□□ -0.316e-6■■■□□ 17.4
SEC16A-206ENST00000431893 OTUD6BQ8N6M0 293 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 EXOC1Q9NV70 894 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 A0A087WZG4 1122 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 CCDC196A0A1B0GTZ2 297 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 MARCKSP29966 332 aaPredicted RBP13.09□□□□□ -0.31
SEC16A-206ENST00000431893 PSMC4P43686 418 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 CCDC186Q7Z3E2 898 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 PLEKHH1Q9ULM0 1364 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 NOLC1Q14978 699 aaKnown RBP eCLIP13.09□□□□□ -0.31
SEC16A-206ENST00000431893 RAB34Q9BZG1 259 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 TTC12Q9H892 705 aaPredicted RBP13.09□□□□□ -0.31
SEC16A-206ENST00000431893 ORC3Q9UBD5 711 aaPredicted RBP13.09□□□□□ -0.31
SEC16A-206ENST00000431893 RHOXF2BP0C7M4 288 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 SKILP12757 684 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 USP48Q86UV5 1035 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 RHOXF2Q9BQY4 288 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 DNAJC25Q9H1X3 360 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 WDR70Q9NW82 654 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 ATP5J2-PTCD1G3V325 749 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 ZEB2O60315 1214 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 MRPS9P82933 396 aaKnown RBP13.09□□□□□ -0.31
SEC16A-206ENST00000431893 IFIT5Q13325 482 aaKnown RBP13.09□□□□□ -0.31
SEC16A-206ENST00000431893 CCDC155Q8N6L0 562 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
SEC16A-206ENST00000431893 SLC5A1P13866 664 aa13.08□□□□□ -0.31
SEC16A-206ENST00000431893 IARSP41252 1262 aaKnown RBP13.08□□□□□ -0.31
SEC16A-206ENST00000431893 AKNAD1Q5T1N1 836 aa13.08□□□□□ -0.31
SEC16A-206ENST00000431893 NEMFO60524 1076 aa13.08□□□□□ -0.32
SEC16A-206ENST00000431893 ZBTB3Q9H5J0 574 aa13.08□□□□□ -0.32
SEC16A-206ENST00000431893 TRMT112Q9UI30 125 aaKnown RBP13.08□□□□□ -0.32
SEC16A-206ENST00000431893 PAXBP1Q9Y5B6 917 aa13.08□□□□□ -0.32
SEC16A-206ENST00000431893 FCHSD2O94868 740 aa13.08□□□□□ -0.32
SEC16A-206ENST00000431893 STARD3NLO95772 234 aa13.08□□□□□ -0.32
SEC16A-206ENST00000431893 TCP11L1Q9NUJ3 509 aa13.08□□□□□ -0.32
SEC16A-206ENST00000431893 MAP3K2Q9Y2U5 619 aa13.08□□□□□ -0.32
SEC16A-206ENST00000431893 FANCD2Q9BXW9 1451 aa13.08□□□□□ -0.32
SEC16A-206ENST00000431893 LRSAM1Q6UWE0 723 aa13.08□□□□□ -0.32
SEC16A-206ENST00000431893 ZNF287Q9HBT7 754 aa13.08□□□□□ -0.32
SEC16A-206ENST00000431893 MRVI1Q9Y6F6 885 aa13.08□□□□□ -0.32
SEC16A-206ENST00000431893 KIF20AO95235 890 aa13.08□□□□□ -0.32
SEC16A-206ENST00000431893 GSTA5Q7RTV2 222 aa13.08□□□□□ -0.32
SEC16A-206ENST00000431893 SYNCQ9H7C4 482 aa13.08□□□□□ -0.32
SEC16A-206ENST00000431893 AKR1B10O60218 316 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 HMGB1P09429 215 aaKnown RBP13.07□□□□□ -0.32
SEC16A-206ENST00000431893 UBE2HP62256 183 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 PAXIP1Q6ZW49 1069 aaPredicted RBP13.07□□□□□ -0.32
SEC16A-206ENST00000431893 IFT81Q8WYA0 676 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 RABEP2Q9H5N1 569 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 NKTRP30414 1462 aaKnown RBP13.07□□□□□ -0.32
SEC16A-206ENST00000431893 ZPR1O75312 459 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 CAPN2P17655 700 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 WAPLQ7Z5K2 1190 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 TMOD3Q9NYL9 352 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 CTAGE15A4D2H0 777 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 CTAGE8P0CG41 777 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 SYKP43405 635 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 CKAP4Q07065 602 aaKnown RBP13.07□□□□□ -0.32
SEC16A-206ENST00000431893 DAAM2Q86T65 1068 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 CTAGE6Q86UF2 777 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 CTAGE4Q8IX94 777 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 C10orf67Q8IYJ2 551 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
SEC16A-206ENST00000431893 KAT14Q9H8E8 782 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 TSPY2A6NKD2 308 aa13.07□□□□□ -0.32
SEC16A-206ENST00000431893 TRIM27P14373 513 aa13.06□□□□□ -0.32
SEC16A-206ENST00000431893 FAM114A1Q8IWE2 563 aa13.06□□□□□ -0.32
SEC16A-206ENST00000431893 NEK1Q96PY6 1258 aa13.06□□□□□ -0.32
SEC16A-206ENST00000431893 LZTFL1Q9NQ48 299 aa13.06□□□□□ -0.32
SEC16A-206ENST00000431893 FLIIQ13045 1269 aa13.06□□□□□ -0.32
SEC16A-206ENST00000431893 NAP1L3Q99457 506 aaPredicted RBP13.06□□□□□ -0.32
SEC16A-206ENST00000431893 IQCGQ9H095 443 aaKnown RBP13.06□□□□□ -0.32
SEC16A-206ENST00000431893 CCDC102BQ68D86 513 aa13.06□□□□□ -0.32
SEC16A-206ENST00000431893 GTF3C6Q969F1 213 aa13.06□□□□□ -0.32
SEC16A-206ENST00000431893 DNAI2Q9GZS0 605 aa13.06□□□□□ -0.32
SEC16A-206ENST00000431893 AMPD3Q01432 767 aa13.06□□□□□ -0.32
SEC16A-206ENST00000431893 SF3A3Q12874 501 aaKnown RBP eCLIP13.06□□□□□ -0.322e-7■■■■□ 20.3
SEC16A-206ENST00000431893 CFAP58Q5T655 872 aa13.06□□□□□ -0.32
SEC16A-206ENST00000431893 CCDC25Q86WR0 208 aa13.06□□□□□ -0.32
SEC16A-206ENST00000431893 CCDC50Q8IVM0 306 aa13.06□□□□□ -0.32
SEC16A-206ENST00000431893 UBA7P41226 1012 aa13.06□□□□□ -0.32
SEC16A-206ENST00000431893 STAT6P42226 847 aa13.06□□□□□ -0.32
SEC16A-206ENST00000431893 ARFGAP3Q9NP61 516 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms