RNA–Protein interactions for RNA: ENST00000431877.6

SSFA2-205, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 5,150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-205ENST00000431877 POLR3DP05423 398 aaPredicted RBP18.28■□□□□ 0.52
SSFA2-205ENST00000431877 IQCA1Q86XH1 822 aa18.28■□□□□ 0.52
SSFA2-205ENST00000431877 LRRC2Q9BYS8 371 aa18.28■□□□□ 0.52
SSFA2-205ENST00000431877 KRT18P05783 430 aaKnown RBP18.28■□□□□ 0.52
SSFA2-205ENST00000431877 RAB11FIP4Q86YS3 637 aa18.28■□□□□ 0.52
SSFA2-205ENST00000431877 RNF41Q9H4P4 317 aaPredicted RBP18.28■□□□□ 0.52
SSFA2-205ENST00000431877 METP08581 1390 aa18.27■□□□□ 0.52
SSFA2-205ENST00000431877 KLHL40Q2TBA0 621 aa18.27■□□□□ 0.52
SSFA2-205ENST00000431877 CKAP2LQ8IYA6 745 aa18.27■□□□□ 0.52
SSFA2-205ENST00000431877 BICC1Q9H694 974 aaKnown RBP18.27■□□□□ 0.52
SSFA2-205ENST00000431877 GOLGA8AA7E2F4 631 aa18.27■□□□□ 0.52
SSFA2-205ENST00000431877 CHMLP26374 656 aa18.27■□□□□ 0.52
SSFA2-205ENST00000431877 CCAR1Q8IX12 1150 aaKnown RBP18.27■□□□□ 0.52
SSFA2-205ENST00000431877 ERCC6L2Q5T890 1561 aa18.27■□□□□ 0.51
SSFA2-205ENST00000431877 NMIQ13287 307 aaPredicted RBP18.27■□□□□ 0.51
SSFA2-205ENST00000431877 RBM27Q9P2N5 1060 aaKnown RBP18.27■□□□□ 0.51
SSFA2-205ENST00000431877 ATP6V1AP38606 617 aa18.26■□□□□ 0.51
SSFA2-205ENST00000431877 SF3B2Q13435 895 aaKnown RBP18.26■□□□□ 0.51
SSFA2-205ENST00000431877 USP19O94966 1318 aa18.26■□□□□ 0.51
SSFA2-205ENST00000431877 CTCFLQ8NI51 663 aaPredicted RBP18.26■□□□□ 0.51
SSFA2-205ENST00000431877 MCMDC2Q4G0Z9 681 aa18.26■□□□□ 0.51
SSFA2-205ENST00000431877 DDB1Q16531 1140 aa18.26■□□□□ 0.51
SSFA2-205ENST00000431877 MICU3Q86XE3 530 aa18.26■□□□□ 0.51
SSFA2-205ENST00000431877 SMARCE1Q969G3 411 aa18.26■□□□□ 0.51
SSFA2-205ENST00000431877 MYOM2P54296 1465 aa18.26■□□□□ 0.51
SSFA2-205ENST00000431877 ZCCHC11Q5TAX3 1644 aaKnown RBP18.25■□□□□ 0.51
SSFA2-205ENST00000431877 ZSCAN30Q86W11 494 aa18.25■□□□□ 0.51
SSFA2-205ENST00000431877 CHD1O14646 1710 aa18.25■□□□□ 0.51
SSFA2-205ENST00000431877 CCDC144CPQ8IYA2 1237 aa18.25■□□□□ 0.51
SSFA2-205ENST00000431877 NCOA7Q8NI08 942 aa18.25■□□□□ 0.51
SSFA2-205ENST00000431877 USP26Q9BXU7 913 aa18.25■□□□□ 0.51
SSFA2-205ENST00000431877 ORC3Q9UBD5 711 aaPredicted RBP18.25■□□□□ 0.51
SSFA2-205ENST00000431877 HOXB7P09629 217 aa18.25■□□□□ 0.51
SSFA2-205ENST00000431877 UQCRFS1P1P0C7P4 283 aa18.25■□□□□ 0.51
SSFA2-205ENST00000431877 CCDC152Q4G0S7 254 aa18.25■□□□□ 0.51
SSFA2-205ENST00000431877 ZNF287Q9HBT7 754 aa18.25■□□□□ 0.51
SSFA2-205ENST00000431877 ARGLU1Q9NWB6 273 aaPredicted RBP18.25■□□□□ 0.51
SSFA2-205ENST00000431877 STIM1Q13586 685 aa18.24■□□□□ 0.51
SSFA2-205ENST00000431877 TMEM67Q5HYA8 995 aa18.24■□□□□ 0.51
SSFA2-205ENST00000431877 RPGRQ92834 1020 aaKnown RBP18.24■□□□□ 0.51
SSFA2-205ENST00000431877 CEP131Q9UPN4 1083 aa18.24■□□□□ 0.51
SSFA2-205ENST00000431877 ZFYP08048 801 aaPredicted RBP18.24■□□□□ 0.51
SSFA2-205ENST00000431877 ZSCAN22P10073 491 aaPredicted RBP18.24■□□□□ 0.51
SSFA2-205ENST00000431877 TFCP2Q12800 502 aa18.24■□□□□ 0.51
SSFA2-205ENST00000431877 PPFIBP1Q86W92 1011 aa18.23■□□□□ 0.51
SSFA2-205ENST00000431877 DDX17Q92841 729 aaKnown RBP18.23■□□□□ 0.51
SSFA2-205ENST00000431877 ZHX3Q9H4I2 956 aa18.23■□□□□ 0.51
SSFA2-205ENST00000431877 IQSEC3Q9UPP2 1182 aaPredicted RBP18.23■□□□□ 0.51
SSFA2-205ENST00000431877 VSIG10Q8N0Z9 540 aa18.23■□□□□ 0.51
SSFA2-205ENST00000431877 PLEKHF1Q96S99 279 aa18.23■□□□□ 0.51
SSFA2-205ENST00000431877 PRDM15P57071 1507 aaPredicted RBP18.23■□□□□ 0.51
SSFA2-205ENST00000431877 CFAP74Q9C0B2 1584 aa18.23■□□□□ 0.51
SSFA2-205ENST00000431877 PNMA6EA0A0J9YXQ4 647 aa18.23■□□□□ 0.51
SSFA2-205ENST00000431877 IARSP41252 1262 aaKnown RBP18.23■□□□□ 0.51
SSFA2-205ENST00000431877 USP25Q9UHP3 1055 aa18.23■□□□□ 0.51
SSFA2-205ENST00000431877 PCDH11XQ9BZA7 1347 aa18.23■□□□□ 0.51
SSFA2-205ENST00000431877 PCDH11YQ9BZA8 1340 aa18.23■□□□□ 0.51
SSFA2-205ENST00000431877 PAG1Q9NWQ8 432 aa18.22■□□□□ 0.51
SSFA2-205ENST00000431877 CCP110O43303 1012 aa18.22■□□□□ 0.51
SSFA2-205ENST00000431877 NBPF7P0C2Y1 421 aaPredicted RBP18.22■□□□□ 0.51
SSFA2-205ENST00000431877 MCM5P33992 734 aa18.22■□□□□ 0.51
SSFA2-205ENST00000431877 SSRP1Q08945 709 aaKnown RBP18.22■□□□□ 0.51
SSFA2-205ENST00000431877 SMTNL1A8MU46 457 aa18.22■□□□□ 0.51
SSFA2-205ENST00000431877 CBFA2T2O43439 604 aa18.22■□□□□ 0.51
SSFA2-205ENST00000431877 DZIP3Q86Y13 1208 aaKnown RBP18.22■□□□□ 0.51
SSFA2-205ENST00000431877 FSIP1Q8NA03 581 aa18.22■□□□□ 0.51
SSFA2-205ENST00000431877 ANO10Q9NW15 660 aa18.22■□□□□ 0.51
SSFA2-205ENST00000431877 SSBP05455 408 aaKnown RBP eCLIP18.22■□□□□ 0.51
SSFA2-205ENST00000431877 UBE2HP62256 183 aa18.22■□□□□ 0.51
SSFA2-205ENST00000431877 MFSD6Q6ZSS7 791 aa18.22■□□□□ 0.51
SSFA2-205ENST00000431877 NBPF5PQ86XG9 351 aaPredicted RBP18.22■□□□□ 0.51
SSFA2-205ENST00000431877 ZNF444Q8N0Y2 327 aaPredicted RBP18.22■□□□□ 0.51
SSFA2-205ENST00000431877 ZGPATQ8N5A5 531 aaKnown RBP18.22■□□□□ 0.51
SSFA2-205ENST00000431877 AK7Q96M32 723 aa18.22■□□□□ 0.51
SSFA2-205ENST00000431877 TRMT2AQ8IZ69 625 aaKnown RBP18.21■□□□□ 0.51
SSFA2-205ENST00000431877 NIP7Q9Y221 180 aaKnown RBP eCLIP18.21■□□□□ 0.51
SSFA2-205ENST00000431877 ARHGEF10O15013 1369 aa18.21■□□□□ 0.51
SSFA2-205ENST00000431877 SLC9C2Q5TAH2 1124 aa18.21■□□□□ 0.51
SSFA2-205ENST00000431877 DDX19AQ9NUU7 478 aaKnown RBP18.21■□□□□ 0.51
SSFA2-205ENST00000431877 KLF18A0A0U1RQI7 1052 aa18.21■□□□□ 0.51
SSFA2-205ENST00000431877 C6orf229H3BNL8 230 aa18.21■□□□□ 0.51
SSFA2-205ENST00000431877 METAP2P50579 478 aaKnown RBP eCLIP18.21■□□□□ 0.51
SSFA2-205ENST00000431877 BTG4Q9NY30 223 aa18.21■□□□□ 0.51
SSFA2-205ENST00000431877 CFAP100Q494V2 611 aa18.2■□□□□ 0.5
SSFA2-205ENST00000431877 MPHOSPH10O00566 681 aaKnown RBP18.2■□□□□ 0.5
SSFA2-205ENST00000431877 DHX8Q14562 1220 aaKnown RBP18.2■□□□□ 0.5
SSFA2-205ENST00000431877 IL17REQ8NFR9 667 aa18.2■□□□□ 0.5
SSFA2-205ENST00000431877 KLHDC4Q8TBB5 520 aa18.2■□□□□ 0.5
SSFA2-205ENST00000431877 CATIPQ7Z7H3 387 aa18.2■□□□□ 0.5
SSFA2-205ENST00000431877 RFC4P35249 363 aa18.2■□□□□ 0.5
SSFA2-205ENST00000431877 AK2P54819 239 aa18.2■□□□□ 0.5
SSFA2-205ENST00000431877 ZNF521Q96K83 1311 aa18.2■□□□□ 0.5
SSFA2-205ENST00000431877 HMGB2P26583 209 aaKnown RBP18.19■□□□□ 0.5
SSFA2-205ENST00000431877 EIF4A1P60842 406 aaKnown RBP18.19■□□□□ 0.5
SSFA2-205ENST00000431877 KIAA0232Q92628 1395 aa18.19■□□□□ 0.5
SSFA2-205ENST00000431877 Q6ZUG5 572 aa18.19■□□□□ 0.5
SSFA2-205ENST00000431877 ANKRD18AQ8IVF6 992 aa18.19■□□□□ 0.5
SSFA2-205ENST00000431877 HELBQ8NG08 1087 aaPredicted RBP18.19■□□□□ 0.5
SSFA2-205ENST00000431877 RBM25P49756 843 aaKnown RBP18.19■□□□□ 0.5
SSFA2-205ENST00000431877 ZSCAN23Q3MJ62 389 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms