RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 TRIM6-TRIM34B2RNG4 842 aa15.67■□□□□ 0.1
DDX56-204ENST00000431640 GRM8O00222 908 aa15.67■□□□□ 0.1
DDX56-204ENST00000431640 A1BGP04217 495 aa15.67■□□□□ 0.1
DDX56-204ENST00000431640 HSP90AA1P07900 732 aaKnown RBP15.67■□□□□ 0.1
DDX56-204ENST00000431640 C4BP0C0L5 1744 aa15.66■□□□□ 0.1
DDX56-204ENST00000431640 CYP19A1P11511 503 aaPredicted RBP15.66■□□□□ 0.1
DDX56-204ENST00000431640 MCCP23508 829 aa15.66■□□□□ 0.1
DDX56-204ENST00000431640 LINC00116Q8NCU8 138 aa15.66■□□□□ 0.1
DDX56-204ENST00000431640 LRRC4BQ9NT99 713 aa15.66■□□□□ 0.1
DDX56-204ENST00000431640 ARFGEF2Q9Y6D5 1785 aa15.66■□□□□ 0.1
DDX56-204ENST00000431640 ERBB4Q15303 1308 aa15.66■□□□□ 0.1
DDX56-204ENST00000431640 TTC41PQ6P2S7 1318 aa15.66■□□□□ 0.1
DDX56-204ENST00000431640 DDIT3P35638 169 aa15.66■□□□□ 0.1
DDX56-204ENST00000431640 AIMP1Q12904 312 aaKnown RBP15.66■□□□□ 0.1
DDX56-204ENST00000431640 OS9Q13438 667 aaPredicted RBP15.66■□□□□ 0.1
DDX56-204ENST00000431640 SMARCC1Q92922 1105 aaPredicted RBP15.66■□□□□ 0.1
DDX56-204ENST00000431640 RILPL2Q969X0 211 aa15.66■□□□□ 0.1
DDX56-204ENST00000431640 ESYT1Q9BSJ8 1104 aa15.66■□□□□ 0.1
DDX56-204ENST00000431640 METTL22Q9BUU2 404 aaPredicted RBP15.66■□□□□ 0.1
DDX56-204ENST00000431640 ST18O60284 1047 aa15.65■□□□□ 0.1
DDX56-204ENST00000431640 CHMLP26374 656 aa15.65■□□□□ 0.1
DDX56-204ENST00000431640 ATP6V1AP38606 617 aa15.65■□□□□ 0.1
DDX56-204ENST00000431640 ANKRD13DQ6ZTN6 518 aa15.65■□□□□ 0.1
DDX56-204ENST00000431640 COPS6Q7L5N1 327 aa15.65■□□□□ 0.1
DDX56-204ENST00000431640 CLASRPQ8N2M8 674 aaKnown RBP15.65■□□□□ 0.1
DDX56-204ENST00000431640 IL1RAPL2Q9NP60 686 aa15.65■□□□□ 0.1
DDX56-204ENST00000431640 ZBTB1Q9Y2K1 713 aa15.65■□□□□ 0.1
DDX56-204ENST00000431640 USP42Q9H9J4 1324 aaKnown RBP15.64■□□□□ 0.09
DDX56-204ENST00000431640 MYL6BP14649 208 aa15.64■□□□□ 0.09
DDX56-204ENST00000431640 CWF19L2Q2TBE0 894 aaKnown RBP15.64■□□□□ 0.09
DDX56-204ENST00000431640 PROM2Q8N271 834 aa15.64■□□□□ 0.09
DDX56-204ENST00000431640 XAGE3Q8WTP9 111 aa15.64■□□□□ 0.09
DDX56-204ENST00000431640 TUBGCP6Q96RT7 1819 aa15.64■□□□□ 0.09
DDX56-204ENST00000431640 ANAPC15P60006 121 aa15.63■□□□□ 0.09
DDX56-204ENST00000431640 INTS5Q6P9B9 1019 aaKnown RBP15.63■□□□□ 0.09
DDX56-204ENST00000431640 AMIGO3Q86WK7 504 aa15.63■□□□□ 0.09
DDX56-204ENST00000431640 NUTM1Q86Y26 1132 aa15.63■□□□□ 0.09
DDX56-204ENST00000431640 GPATCH3Q96I76 525 aa15.63■□□□□ 0.09
DDX56-204ENST00000431640 C4AP0C0L4 1744 aa15.63■□□□□ 0.09
DDX56-204ENST00000431640 NEURL1BA8MQ27 555 aa15.62■□□□□ 0.09
DDX56-204ENST00000431640 GLRX3O76003 335 aaKnown RBP15.62■□□□□ 0.09
DDX56-204ENST00000431640 MCM4P33991 863 aa15.62■□□□□ 0.09
DDX56-204ENST00000431640 CRKLP46109 303 aaKnown RBP15.62■□□□□ 0.09
DDX56-204ENST00000431640 G3BP1Q13283 466 aaKnown RBP eCLIP15.62■□□□□ 0.095e-8■□□□□ 8.8
DDX56-204ENST00000431640 CNTROBQ8N137 903 aa15.62■□□□□ 0.09
DDX56-204ENST00000431640 BCORQ6W2J9 1755 aa15.62■□□□□ 0.09
DDX56-204ENST00000431640 UBR3Q6ZT12 1888 aa15.62■□□□□ 0.09
DDX56-204ENST00000431640 IGKV5-2P06315 115 aa15.62■□□□□ 0.09
DDX56-204ENST00000431640 PTMSP20962 102 aa15.62■□□□□ 0.09
DDX56-204ENST00000431640 MCM2P49736 904 aa15.62■□□□□ 0.09
DDX56-204ENST00000431640 GCKRQ14397 625 aa15.62■□□□□ 0.09
DDX56-204ENST00000431640 SMIM5Q71RC9 77 aa15.62■□□□□ 0.09
DDX56-204ENST00000431640 PI4K2BQ8TCG2 481 aa15.62■□□□□ 0.09
DDX56-204ENST00000431640 CCNL1Q9UK58 526 aaPredicted RBP15.62■□□□□ 0.09
DDX56-204ENST00000431640 TSHZ3Q63HK5 1081 aa15.61■□□□□ 0.09
DDX56-204ENST00000431640 SUCLG2Q96I99 432 aa15.61■□□□□ 0.09
DDX56-204ENST00000431640 SCN7AQ01118 1682 aa15.6■□□□□ 0.09
DDX56-204ENST00000431640 DDX11L8A8MPP1 907 aa15.6■□□□□ 0.09
DDX56-204ENST00000431640 APBA3O96018 575 aa15.6■□□□□ 0.09
DDX56-204ENST00000431640 IFIT2P09913 472 aaKnown RBP15.6■□□□□ 0.09
DDX56-204ENST00000431640 PLBD2Q8NHP8 589 aa15.6■□□□□ 0.09
DDX56-204ENST00000431640 IL17RAQ96F46 866 aa15.6■□□□□ 0.09
DDX56-204ENST00000431640 MYD88Q99836 296 aa15.6■□□□□ 0.09
DDX56-204ENST00000431640 CWC22Q9HCG8 908 aaKnown RBP15.6■□□□□ 0.09
DDX56-204ENST00000431640 CD2BP2O95400 341 aaKnown RBP15.59■□□□□ 0.09
DDX56-204ENST00000431640 TTLL7Q6ZT98 887 aa15.59■□□□□ 0.09
DDX56-204ENST00000431640 GBP4Q96PP9 640 aa15.59■□□□□ 0.09
DDX56-204ENST00000431640 BICC1Q9H694 974 aaKnown RBP15.59■□□□□ 0.09
DDX56-204ENST00000431640 ECHDC1Q9NTX5 307 aa15.59■□□□□ 0.09
DDX56-204ENST00000431640 CCDC87Q9NVE4 849 aa15.59■□□□□ 0.09
DDX56-204ENST00000431640 COL15A1P39059 1388 aa15.59■□□□□ 0.09
DDX56-204ENST00000431640 CNTNAP4Q9C0A0 1308 aa15.59■□□□□ 0.09
DDX56-204ENST00000431640 STARD3NLO95772 234 aa15.58■□□□□ 0.09
DDX56-204ENST00000431640 RAB3GAP1Q15042 981 aa15.58■□□□□ 0.09
DDX56-204ENST00000431640 TXNRD1Q16881 649 aa15.58■□□□□ 0.09
DDX56-204ENST00000431640 RUFY2Q8WXA3 655 aa15.58■□□□□ 0.09
DDX56-204ENST00000431640 KAZALD1Q96I82 304 aa15.58■□□□□ 0.09
DDX56-204ENST00000431640 TEX13AQ9BXU3 409 aaPredicted RBP15.58■□□□□ 0.09
DDX56-204ENST00000431640 PLSCR1O15162 318 aa15.58■□□□□ 0.08
DDX56-204ENST00000431640 ANO2Q9NQ90 1003 aa15.58■□□□□ 0.08
DDX56-204ENST00000431640 NUCB2P80303 420 aa15.57■□□□□ 0.08
DDX56-204ENST00000431640 ANKRD36CQ5JPF3 1778 aa15.57■□□□□ 0.08
DDX56-204ENST00000431640 AK9Q5TCS8 1911 aa15.56■□□□□ 0.08
DDX56-204ENST00000431640 EIF5P55010 431 aaKnown RBP15.56■□□□□ 0.08
DDX56-204ENST00000431640 KIAA1211Q6ZU35 1233 aa15.56■□□□□ 0.08
DDX56-204ENST00000431640 CAMKK2Q96RR4 588 aa15.56■□□□□ 0.08
DDX56-204ENST00000431640 AFDNP55196 1824 aaKnown RBP15.55■□□□□ 0.08
DDX56-204ENST00000431640 HIP1O00291 1037 aa15.55■□□□□ 0.08
DDX56-204ENST00000431640 SGSM2O43147 1006 aa15.55■□□□□ 0.08
DDX56-204ENST00000431640 EN1Q05925 392 aaPredicted RBP15.55■□□□□ 0.08
DDX56-204ENST00000431640 EZH2Q15910 746 aaKnown RBP15.55■□□□□ 0.08
DDX56-204ENST00000431640 ZNF827Q17R98 1081 aa15.55■□□□□ 0.08
DDX56-204ENST00000431640 DEFB132Q7Z7B7 95 aa15.55■□□□□ 0.08
DDX56-204ENST00000431640 TNPO1Q92973 898 aaKnown RBP15.55■□□□□ 0.08
DDX56-204ENST00000431640 EVI5LQ96CN4 794 aa15.55■□□□□ 0.08
DDX56-204ENST00000431640 COPRSQ9NQ92 184 aa15.55■□□□□ 0.08
DDX56-204ENST00000431640 PA2G4Q9UQ80 394 aaKnown RBP15.55■□□□□ 0.08
DDX56-204ENST00000431640 ZNF330Q9Y3S2 320 aaPredicted RBP15.55■□□□□ 0.08
DDX56-204ENST00000431640 SASH1O94885 1247 aa15.54■□□□□ 0.08
DDX56-204ENST00000431640 IL6STP40189 918 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms