RNA–Protein interactions for RNA: ENST00000431556.6

YIF1A-204, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 619 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-204ENST00000431556 E9PSI1 815 aa20.17■□□□□ 0.82
YIF1A-204ENST00000431556 SLC4A2P04920 1241 aa20.17■□□□□ 0.82
YIF1A-204ENST00000431556 CDCA7LQ96GN5 454 aa20.17■□□□□ 0.82
YIF1A-204ENST00000431556 UTP14AQ9BVJ6 771 aaKnown RBP20.17■□□□□ 0.82
YIF1A-204ENST00000431556 RIC1Q4ADV7 1423 aa20.17■□□□□ 0.82
YIF1A-204ENST00000431556 SLX4Q8IY92 1834 aa20.16■□□□□ 0.82
YIF1A-204ENST00000431556 KLRG2A4D1S0 409 aaPredicted RBP20.16■□□□□ 0.82
YIF1A-204ENST00000431556 SLFN5Q08AF3 891 aa20.16■□□□□ 0.82
YIF1A-204ENST00000431556 ARHGAP27Q6ZUM4 889 aa20.16■□□□□ 0.82
YIF1A-204ENST00000431556 SYNE4Q8N205 404 aa20.16■□□□□ 0.82
YIF1A-204ENST00000431556 ISCA1Q9BUE6 129 aa20.16■□□□□ 0.82
YIF1A-204ENST00000431556 STYK1Q6J9G0 422 aa20.15■□□□□ 0.82
YIF1A-204ENST00000431556 C3orf67Q6ZVT6 689 aa20.15■□□□□ 0.82
YIF1A-204ENST00000431556 MASTLQ96GX5 879 aa20.15■□□□□ 0.82
YIF1A-204ENST00000431556 MYD88Q99836 296 aa20.15■□□□□ 0.82
YIF1A-204ENST00000431556 ZNF219Q9P2Y4 722 aaPredicted RBP20.15■□□□□ 0.82
YIF1A-204ENST00000431556 ADCY9O60503 1353 aa20.15■□□□□ 0.82
YIF1A-204ENST00000431556 CACNA1FO60840 1977 aa20.14■□□□□ 0.81
YIF1A-204ENST00000431556 DDX58O95786 925 aaKnown RBP20.14■□□□□ 0.81
YIF1A-204ENST00000431556 NPR1P16066 1061 aa20.14■□□□□ 0.81
YIF1A-204ENST00000431556 TRMT112Q9UI30 125 aaKnown RBP20.14■□□□□ 0.81
YIF1A-204ENST00000431556 LAMB2P55268 1798 aa20.13■□□□□ 0.81
YIF1A-204ENST00000431556 PI4KAP2A4QPH2 592 aa20.13■□□□□ 0.81
YIF1A-204ENST00000431556 FLIIQ13045 1269 aa20.13■□□□□ 0.81
YIF1A-204ENST00000431556 PRPF40BQ6NWY9 871 aaKnown RBP20.13■□□□□ 0.81
YIF1A-204ENST00000431556 PI4KAP1Q8N8J0 262 aa20.13■□□□□ 0.81
YIF1A-204ENST00000431556 MAP3K2Q9Y2U5 619 aa20.13■□□□□ 0.81
YIF1A-204ENST00000431556 DDX60Q8IY21 1712 aaKnown RBP20.13■□□□□ 0.81
YIF1A-204ENST00000431556 RNF123Q5XPI4 1314 aa20.12■□□□□ 0.81
YIF1A-204ENST00000431556 HCLS1P14317 486 aaPredicted RBP20.12■□□□□ 0.81
YIF1A-204ENST00000431556 CRY2Q49AN0 593 aa20.12■□□□□ 0.81
YIF1A-204ENST00000431556 CNKSR1Q969H4 720 aa20.12■□□□□ 0.81
YIF1A-204ENST00000431556 METTL22Q9BUU2 404 aaPredicted RBP20.12■□□□□ 0.81
YIF1A-204ENST00000431556 SH3TC1Q8TE82 1336 aa20.11■□□□□ 0.81
YIF1A-204ENST00000431556 C21orf2O43822 256 aa20.11■□□□□ 0.81
YIF1A-204ENST00000431556 RASSF7Q02833 373 aa20.11■□□□□ 0.81
YIF1A-204ENST00000431556 KSR2Q6VAB6 950 aa20.11■□□□□ 0.81
YIF1A-204ENST00000431556 TRIM28Q13263 835 aaKnown RBP20.1■□□□□ 0.81
YIF1A-204ENST00000431556 RTL5Q5HYW3 569 aaPredicted RBP20.1■□□□□ 0.81
YIF1A-204ENST00000431556 FAM89AQ96GI7 184 aa20.1■□□□□ 0.81
YIF1A-204ENST00000431556 HNRNPUQ00839 825 aaKnown RBP eCLIP20.09■□□□□ 0.81
YIF1A-204ENST00000431556 FKBP5Q13451 457 aaPredicted RBP20.09■□□□□ 0.81
YIF1A-204ENST00000431556 SLC10A5Q5PT55 438 aa20.09■□□□□ 0.81
YIF1A-204ENST00000431556 TRMT2AQ8IZ69 625 aaKnown RBP20.09■□□□□ 0.81
YIF1A-204ENST00000431556 RPGRQ92834 1020 aaKnown RBP20.09■□□□□ 0.81
YIF1A-204ENST00000431556 FER1L6Q2WGJ9 1857 aa20.08■□□□□ 0.81
YIF1A-204ENST00000431556 IGKV5-2P06315 115 aa20.08■□□□□ 0.81
YIF1A-204ENST00000431556 NLRP3Q96P20 1036 aa20.08■□□□□ 0.81
YIF1A-204ENST00000431556 SBF1O95248 1867 aa20.07■□□□□ 0.8
YIF1A-204ENST00000431556 NFKBIEO00221 500 aa20.07■□□□□ 0.8
YIF1A-204ENST00000431556 OLFM4Q6UX06 510 aa20.07■□□□□ 0.8
YIF1A-204ENST00000431556 SLC51AQ86UW1 340 aa20.07■□□□□ 0.8
YIF1A-204ENST00000431556 ZNF784Q8NCA9 323 aaPredicted RBP20.07■□□□□ 0.8
YIF1A-204ENST00000431556 CCDC191Q8NCU4 936 aa20.07■□□□□ 0.8
YIF1A-204ENST00000431556 JARID2Q92833 1246 aaPredicted RBP20.07■□□□□ 0.8
YIF1A-204ENST00000431556 HOXA10P31260 410 aaPredicted RBP20.06■□□□□ 0.8
YIF1A-204ENST00000431556 CWF19L2Q2TBE0 894 aaKnown RBP20.06■□□□□ 0.8
YIF1A-204ENST00000431556 C7orf43Q8WVR3 580 aa20.06■□□□□ 0.8
YIF1A-204ENST00000431556 CWC25Q9NXE8 425 aaPredicted RBP20.06■□□□□ 0.8
YIF1A-204ENST00000431556 F6X3S4 739 aa20.05■□□□□ 0.8
YIF1A-204ENST00000431556 ALDH1B1P30837 517 aa20.05■□□□□ 0.8
YIF1A-204ENST00000431556 PRELPP51888 382 aa20.05■□□□□ 0.8
YIF1A-204ENST00000431556 NEXNQ0ZGT2 675 aa20.05■□□□□ 0.8
YIF1A-204ENST00000431556 C9orf131Q5VYM1 1079 aa20.05■□□□□ 0.8
YIF1A-204ENST00000431556 ZBTB38Q8NAP3 1195 aaPredicted RBP20.05■□□□□ 0.8
YIF1A-204ENST00000431556 DNAAF4Q8WXU2 420 aa20.05■□□□□ 0.8
YIF1A-204ENST00000431556 NEURL1BA8MQ27 555 aa20.04■□□□□ 0.8
YIF1A-204ENST00000431556 IRS4O14654 1257 aaPredicted RBP20.04■□□□□ 0.8
YIF1A-204ENST00000431556 RBM17Q96I25 401 aaKnown RBP20.04■□□□□ 0.8
YIF1A-204ENST00000431556 RNF181Q9P0P0 153 aa20.04■□□□□ 0.8
YIF1A-204ENST00000431556 TAF1P21675 1872 aa20.04■□□□□ 0.8
YIF1A-204ENST00000431556 CCDC88AQ3V6T2 1871 aa20.04■□□□□ 0.8
YIF1A-204ENST00000431556 ABCC4O15439 1325 aa20.03■□□□□ 0.8
YIF1A-204ENST00000431556 PCCAP05165 728 aaPredicted RBP20.03■□□□□ 0.8
YIF1A-204ENST00000431556 MRPL50Q8N5N7 158 aaKnown RBP20.03■□□□□ 0.8
YIF1A-204ENST00000431556 SSH1Q8WYL5 1049 aa20.03■□□□□ 0.8
YIF1A-204ENST00000431556 CRAMP1Q96RY5 1269 aa20.03■□□□□ 0.8
YIF1A-204ENST00000431556 BCL2L13Q9BXK5 485 aa20.03■□□□□ 0.8
YIF1A-204ENST00000431556 CCDC93Q567U6 631 aa20.02■□□□□ 0.8
YIF1A-204ENST00000431556 COL4A1P02462 1669 aa20.02■□□□□ 0.8
YIF1A-204ENST00000431556 PPEF1O14829 653 aaPredicted RBP20.01■□□□□ 0.79
YIF1A-204ENST00000431556 SOGA3Q5TF21 947 aa20.01■□□□□ 0.79
YIF1A-204ENST00000431556 TIAM2Q8IVF5 1701 aa20.01■□□□□ 0.79
YIF1A-204ENST00000431556 SNED1Q8TER0 1413 aa20.01■□□□□ 0.79
YIF1A-204ENST00000431556 LMNB1P20700 586 aa20■□□□□ 0.79
YIF1A-204ENST00000431556 TAOK3Q9H2K8 898 aa20■□□□□ 0.79
YIF1A-204ENST00000431556 SF3B3Q15393 1217 aaKnown RBP19.99■□□□□ 0.79
YIF1A-204ENST00000431556 DDX46Q7L014 1031 aaKnown RBP19.99■□□□□ 0.79
YIF1A-204ENST00000431556 LINS1Q8NG48 757 aa19.99■□□□□ 0.79
YIF1A-204ENST00000431556 ZNF526Q8TF50 670 aaPredicted RBP19.99■□□□□ 0.79
YIF1A-204ENST00000431556 LTBP3Q9NS15 1303 aa19.99■□□□□ 0.79
YIF1A-204ENST00000431556 GCKRQ14397 625 aa19.98■□□□□ 0.79
YIF1A-204ENST00000431556 ALDH1L2Q3SY69 923 aa19.98■□□□□ 0.79
YIF1A-204ENST00000431556 BEND3Q5T5X7 828 aa19.98■□□□□ 0.79
YIF1A-204ENST00000431556 SMC4Q9NTJ3 1288 aa19.98■□□□□ 0.79
YIF1A-204ENST00000431556 CDHR2Q9BYE9 1310 aa19.98■□□□□ 0.79
YIF1A-204ENST00000431556 PDE8AO60658 829 aa19.97■□□□□ 0.79
YIF1A-204ENST00000431556 CT47B1P0C2W7 299 aaPredicted RBP19.97■□□□□ 0.79
YIF1A-204ENST00000431556 GRAPQ13588 217 aa19.97■□□□□ 0.79
YIF1A-204ENST00000431556 UBE3BQ7Z3V4 1068 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms