RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CEP135Q66GS9 1140 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 RASEFQ8IZ41 740 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 IL25Q9H293 177 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 SLC52A1Q9NWF4 448 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 NUP205Q92621 2012 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 PSEN1P49768 467 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 AEBP1Q8IUX7 1158 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 MPNDQ8N594 471 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 GSDMDP57764 484 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 NECTIN1Q15223 517 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 ICE2Q659A1 982 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 HNRNPLLQ8WVV9 542 aaKnown RBP6.07□□□□□ -1.44
RIF1-203ENST00000428287 JCADQ9P266 1359 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 TRIP11Q15643 1979 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 LMO7Q8WWI1 1683 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 GUCY2CP25092 1073 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 CCDC144BQ3MJ40 725 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 TRIM65Q6PJ69 517 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 UNC5CLQ8IV45 518 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 REXO1L1PQ8IX06 675 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 CCDC144CPQ8IYA2 1237 aa6.07□□□□□ -1.44
RIF1-203ENST00000428287 CCT4P50991 539 aaKnown RBP6.06□□□□□ -1.44
RIF1-203ENST00000428287 ST3GAL1Q11201 340 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 RTF1Q92541 710 aaKnown RBP6.06□□□□□ -1.44
RIF1-203ENST00000428287 ALKQ9UM73 1620 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 MYO1CO00159 1063 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 CTAGE5O15320 804 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 FIBPO43427 364 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 CLCN6P51797 869 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 ERCC6LQ2NKX8 1250 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 LUZP1Q86V48 1076 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 PI4K2BQ8TCG2 481 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 ADAM21Q9UKJ8 722 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 RCOR1Q9UKL0 485 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 KIF3BO15066 747 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 FBXO18Q8NFZ0 1043 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 NUP62CLQ9H1M0 184 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 CRB1P82279 1406 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 ATL3Q6DD88 541 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 NBPF11Q86T75 865 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 ENGASEQ8NFI3 743 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 PLEKHG2Q9H7P9 1386 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 CPP00450 1065 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 AK2P54819 239 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 TUBB4BP68371 445 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 KRT24Q2M2I5 525 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 SRLQ86TD4 932 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 GGNBP2Q9H3C7 697 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 DACT1Q9NYF0 836 aa6.06□□□□□ -1.44
RIF1-203ENST00000428287 MAP2K7O14733 419 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 TBC1D8O95759 1140 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 ZSCAN26Q16670 478 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 LSG1Q9H089 658 aaKnown RBP6.05□□□□□ -1.44
RIF1-203ENST00000428287 TMX1Q9H3N1 280 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 RGPD5Q99666 1765 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 FANCGO15287 622 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 NR1I2O75469 434 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 ADD1P35611 737 aaKnown RBP6.05□□□□□ -1.44
RIF1-203ENST00000428287 RASSF4Q9H2L5 321 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 USP16Q9Y5T5 823 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 TECPR2O15040 1411 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 NPHP4O75161 1426 aaPredicted RBP6.05□□□□□ -1.44
RIF1-203ENST00000428287 SKILP12757 684 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 ELF2Q15723 593 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 USP44Q9H0E7 712 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 CASQ1P31415 396 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 MAP3K9P80192 1104 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 GPS2Q13227 327 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 TMEM132EQ6IEE7 984 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 RPAINQ86UA6 219 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 SUGP1Q8IWZ8 645 aaKnown RBP6.05□□□□□ -1.44
RIF1-203ENST00000428287 TRIM5Q9C035 493 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 PHLPP2Q6ZVD8 1323 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 DHX16O60231 1041 aaKnown RBP6.05□□□□□ -1.44
RIF1-203ENST00000428287 IRX3P78415 501 aaPredicted RBP6.05□□□□□ -1.44
RIF1-203ENST00000428287 THUMPD2Q9BTF0 503 aaKnown RBP6.05□□□□□ -1.44
RIF1-203ENST00000428287 FUT8Q9BYC5 575 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 LRRCC1Q9C099 1032 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 ANO2Q9NQ90 1003 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 EFCAB8A8MWE9 144 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 GSCP56915 257 aaPredicted RBP6.05□□□□□ -1.44
RIF1-203ENST00000428287 MTX1Q13505 466 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 TXLNBQ8N3L3 684 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 SPC24Q8NBT2 197 aa6.05□□□□□ -1.44
RIF1-203ENST00000428287 LEO1Q8WVC0 666 aaPredicted RBP6.05□□□□□ -1.44
RIF1-203ENST00000428287 C4AP0C0L4 1744 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 C4BP0C0L5 1744 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 GNAI2P04899 355 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 GNAI3P08754 354 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 USP5P45974 858 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 SIRT1Q96EB6 747 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 ZSCAN31Q96LW9 406 aaPredicted RBP6.04□□□□□ -1.44
RIF1-203ENST00000428287 ANO6Q4KMQ2 910 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 RABGGTAQ92696 567 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 KIF13AQ9H1H9 1805 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 TUBBP07437 444 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 GOLGA5Q8TBA6 731 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 PGBD1Q96JS3 809 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 ADAMTS7Q9UKP4 1686 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 TPM4P67936 248 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms