RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 RTCBQ9Y3I0 505 aaKnown RBP19.27■□□□□ 0.68
TVP23C-203ENST00000428082 NUP98P52948 1817 aa19.27■□□□□ 0.68
TVP23C-203ENST00000428082 AFDNP55196 1824 aaKnown RBP19.27■□□□□ 0.68
TVP23C-203ENST00000428082 IGKV5-2P06315 115 aa19.27■□□□□ 0.67
TVP23C-203ENST00000428082 MCM4P33991 863 aa19.27■□□□□ 0.67
TVP23C-203ENST00000428082 HLFQ16534 295 aa19.27■□□□□ 0.67
TVP23C-203ENST00000428082 LINS1Q8NG48 757 aa19.27■□□□□ 0.67
TVP23C-203ENST00000428082 NEXNQ0ZGT2 675 aa19.26■□□□□ 0.67
TVP23C-203ENST00000428082 CEP85Q6P2H3 762 aa19.26■□□□□ 0.67
TVP23C-203ENST00000428082 DEFB132Q7Z7B7 95 aa19.26■□□□□ 0.67
TVP23C-203ENST00000428082 PLEKHM2Q8IWE5 1019 aa19.26■□□□□ 0.67
TVP23C-203ENST00000428082 MEIS3Q99687 375 aa19.26■□□□□ 0.67
TVP23C-203ENST00000428082 ATP5J2-PTCD1G3V325 749 aa19.25■□□□□ 0.67
TVP23C-203ENST00000428082 BAG6P46379 1132 aa19.25■□□□□ 0.67
TVP23C-203ENST00000428082 CASC1Q6TDU7 716 aa19.25■□□□□ 0.67
TVP23C-203ENST00000428082 BCORQ6W2J9 1755 aa19.25■□□□□ 0.67
TVP23C-203ENST00000428082 DDX11L8A8MPP1 907 aa19.25■□□□□ 0.67
TVP23C-203ENST00000428082 PHF14O94880 888 aa19.25■□□□□ 0.67
TVP23C-203ENST00000428082 PTMSP20962 102 aa19.25■□□□□ 0.67
TVP23C-203ENST00000428082 TTC22Q5TAA0 569 aa19.25■□□□□ 0.67
TVP23C-203ENST00000428082 GIGYF2Q6Y7W6 1299 aaKnown RBP19.25■□□□□ 0.67
TVP23C-203ENST00000428082 C4AP0C0L4 1744 aa19.24■□□□□ 0.67
TVP23C-203ENST00000428082 A0A087WZG4 1122 aa19.24■□□□□ 0.67
TVP23C-203ENST00000428082 ERVV-1B6SEH8 477 aa19.24■□□□□ 0.67
TVP23C-203ENST00000428082 ALDH1L1O75891 902 aa19.24■□□□□ 0.67
TVP23C-203ENST00000428082 CAMTA2O94983 1202 aa19.24■□□□□ 0.67
TVP23C-203ENST00000428082 ZNF827Q17R98 1081 aa19.24■□□□□ 0.67
TVP23C-203ENST00000428082 USP44Q9H0E7 712 aa19.24■□□□□ 0.67
TVP23C-203ENST00000428082 ANKRD36CQ5JPF3 1778 aa19.24■□□□□ 0.67
TVP23C-203ENST00000428082 NEURL1BA8MQ27 555 aa19.23■□□□□ 0.67
TVP23C-203ENST00000428082 ARHGEF1Q92888 912 aaKnown RBP19.23■□□□□ 0.67
TVP23C-203ENST00000428082 HMGB2P26583 209 aaKnown RBP19.23■□□□□ 0.67
TVP23C-203ENST00000428082 TCIRG1Q13488 830 aa19.23■□□□□ 0.67
TVP23C-203ENST00000428082 SPRYD3Q8NCJ5 442 aa19.23■□□□□ 0.67
TVP23C-203ENST00000428082 AKT1S1Q96B36 256 aa19.23■□□□□ 0.67
TVP23C-203ENST00000428082 TUBGCP6Q96RT7 1819 aa19.22■□□□□ 0.67
TVP23C-203ENST00000428082 TRAPPC3LQ5T215 181 aa19.22■□□□□ 0.67
TVP23C-203ENST00000428082 CCDC125Q86Z20 511 aa19.22■□□□□ 0.67
TVP23C-203ENST00000428082 SCN7AQ01118 1682 aa19.22■□□□□ 0.67
TVP23C-203ENST00000428082 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.21■□□□□ 0.67
TVP23C-203ENST00000428082 DDIT3P35638 169 aa19.21■□□□□ 0.67
TVP23C-203ENST00000428082 ISCA1Q9BUE6 129 aa19.21■□□□□ 0.67
TVP23C-203ENST00000428082 NBPF7P0C2Y1 421 aaPredicted RBP19.21■□□□□ 0.67
TVP23C-203ENST00000428082 GCKRQ14397 625 aa19.21■□□□□ 0.67
TVP23C-203ENST00000428082 SRP68Q9UHB9 627 aaKnown RBP19.21■□□□□ 0.67
TVP23C-203ENST00000428082 NARFQ9UHQ1 456 aa19.21■□□□□ 0.67
TVP23C-203ENST00000428082 K7ELQ4 463 aaPredicted RBP19.2■□□□□ 0.66
TVP23C-203ENST00000428082 GNAI3P08754 354 aa19.19■□□□□ 0.66
TVP23C-203ENST00000428082 GSPT1P15170 499 aaKnown RBP19.19■□□□□ 0.66
TVP23C-203ENST00000428082 ADRA2BP18089 450 aa19.19■□□□□ 0.66
TVP23C-203ENST00000428082 GPTP24298 496 aa19.19■□□□□ 0.66
TVP23C-203ENST00000428082 SSFA2P28290 1259 aa19.19■□□□□ 0.66
TVP23C-203ENST00000428082 HSP90AB3PQ58FF7 597 aa19.19■□□□□ 0.66
TVP23C-203ENST00000428082 USPL1Q5W0Q7 1092 aa19.19■□□□□ 0.66
TVP23C-203ENST00000428082 KIF2CQ99661 725 aa19.19■□□□□ 0.66
TVP23C-203ENST00000428082 C9orf78Q9NZ63 289 aaPredicted RBP19.19■□□□□ 0.66
TVP23C-203ENST00000428082 TFCP2L1Q9NZI6 479 aa19.19■□□□□ 0.66
TVP23C-203ENST00000428082 HSP90AA1P07900 732 aaKnown RBP19.19■□□□□ 0.66
TVP23C-203ENST00000428082 RFC4P35249 363 aa19.19■□□□□ 0.66
TVP23C-203ENST00000428082 RABEP1Q15276 862 aa19.19■□□□□ 0.66
TVP23C-203ENST00000428082 CCDC191Q8NCU4 936 aa19.19■□□□□ 0.66
TVP23C-203ENST00000428082 GBP4Q96PP9 640 aa19.19■□□□□ 0.66
TVP23C-203ENST00000428082 BCL2L12Q9HB09 334 aa19.19■□□□□ 0.66
TVP23C-203ENST00000428082 GRM8O00222 908 aa19.18■□□□□ 0.66
TVP23C-203ENST00000428082 ZPR1O75312 459 aa19.18■□□□□ 0.66
TVP23C-203ENST00000428082 ZNF34Q8IZ26 560 aa19.18■□□□□ 0.66
TVP23C-203ENST00000428082 ANO8Q9HCE9 1232 aaPredicted RBP19.18■□□□□ 0.66
TVP23C-203ENST00000428082 CWC25Q9NXE8 425 aaPredicted RBP19.18■□□□□ 0.66
TVP23C-203ENST00000428082 IBTKQ9P2D0 1353 aaPredicted RBP19.18■□□□□ 0.66
TVP23C-203ENST00000428082 USP42Q9H9J4 1324 aaKnown RBP19.18■□□□□ 0.66
TVP23C-203ENST00000428082 GNAI2P04899 355 aa19.17■□□□□ 0.66
TVP23C-203ENST00000428082 UBTFL1P0CB47 393 aaPredicted RBP19.17■□□□□ 0.66
TVP23C-203ENST00000428082 TRIM28Q13263 835 aaKnown RBP19.17■□□□□ 0.66
TVP23C-203ENST00000428082 IL27Q8NEV9 243 aa19.17■□□□□ 0.66
TVP23C-203ENST00000428082 JARID2Q92833 1246 aaPredicted RBP19.17■□□□□ 0.66
TVP23C-203ENST00000428082 UTYO14607 1347 aa19.17■□□□□ 0.66
TVP23C-203ENST00000428082 CLEC4GQ6UXB4 293 aa19.17■□□□□ 0.66
TVP23C-203ENST00000428082 UPF1Q92900 1129 aaKnown RBP eCLIP19.17■□□□□ 0.66
TVP23C-203ENST00000428082 ZNF652Q9Y2D9 606 aa19.17■□□□□ 0.66
TVP23C-203ENST00000428082 UBN2Q6ZU65 1347 aa19.16■□□□□ 0.66
TVP23C-203ENST00000428082 NLRP10Q86W26 655 aa19.16■□□□□ 0.66
TVP23C-203ENST00000428082 OSBPL3Q9H4L5 887 aa19.16■□□□□ 0.66
TVP23C-203ENST00000428082 LRRFIP2Q9Y608 721 aaKnown RBP19.16■□□□□ 0.66
TVP23C-203ENST00000428082 BRPF3Q9ULD4 1205 aa19.15■□□□□ 0.66
TVP23C-203ENST00000428082 ISY1Q9ULR0 285 aaKnown RBP19.15■□□□□ 0.66
TVP23C-203ENST00000428082 TRAK2O60296 914 aa19.15■□□□□ 0.66
TVP23C-203ENST00000428082 REC8O95072 547 aa19.15■□□□□ 0.66
TVP23C-203ENST00000428082 SLC15A2Q16348 729 aa19.15■□□□□ 0.66
TVP23C-203ENST00000428082 UBE3BQ7Z3V4 1068 aa19.15■□□□□ 0.66
TVP23C-203ENST00000428082 NIP7Q9Y221 180 aaKnown RBP eCLIP19.15■□□□□ 0.66
TVP23C-203ENST00000428082 RGL2O15211 777 aa19.14■□□□□ 0.65
TVP23C-203ENST00000428082 RAB3GAP1Q15042 981 aa19.14■□□□□ 0.65
TVP23C-203ENST00000428082 SKOR2Q2VWA4 1001 aaPredicted RBP19.14■□□□□ 0.65
TVP23C-203ENST00000428082 COL23A1Q86Y22 540 aaPredicted RBP19.14■□□□□ 0.65
TVP23C-203ENST00000428082 H7C1W4 665 aa19.13■□□□□ 0.65
TVP23C-203ENST00000428082 CASP7P55210 303 aa19.13■□□□□ 0.65
TVP23C-203ENST00000428082 TBC1D9BQ66K14 1250 aa19.13■□□□□ 0.65
TVP23C-203ENST00000428082 STK32BQ9NY57 414 aa19.13■□□□□ 0.65
TVP23C-203ENST00000428082 PNPLA7Q6ZV29 1317 aa19.13■□□□□ 0.65
TVP23C-203ENST00000428082 GOLGA6L3A6NEY3 463 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms