RNA–Protein interactions for RNA: ENST00000427786.1

PPP1CB-206, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 4

Gene PPP1CB, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-206ENST00000427786 RNF123Q5XPI4 1314 aa25.44■■□□□ 1.66
PPP1CB-206ENST00000427786 DDX60Q8IY21 1712 aaKnown RBP25.44■■□□□ 1.66
PPP1CB-206ENST00000427786 HSP90AB3PQ58FF7 597 aa25.44■■□□□ 1.66
PPP1CB-206ENST00000427786 PPP1R42Q7Z4L9 355 aa25.44■■□□□ 1.66
PPP1CB-206ENST00000427786 TAOK3Q9H2K8 898 aa25.44■■□□□ 1.66
PPP1CB-206ENST00000427786 HOXA10P31260 410 aaPredicted RBP25.43■■□□□ 1.66
PPP1CB-206ENST00000427786 TCIRG1Q13488 830 aa25.43■■□□□ 1.66
PPP1CB-206ENST00000427786 C3orf67Q6ZVT6 689 aa25.43■■□□□ 1.66
PPP1CB-206ENST00000427786 NLRP10Q86W26 655 aa25.43■■□□□ 1.66
PPP1CB-206ENST00000427786 WWC1Q8IX03 1113 aa25.43■■□□□ 1.66
PPP1CB-206ENST00000427786 KDM2BQ8NHM5 1336 aa25.42■■□□□ 1.66
PPP1CB-206ENST00000427786 CCDC93Q567U6 631 aa25.42■■□□□ 1.66
PPP1CB-206ENST00000427786 C8orf58Q8NAV2 365 aa25.42■■□□□ 1.66
PPP1CB-206ENST00000427786 PLBD2Q8NHP8 589 aa25.42■■□□□ 1.66
PPP1CB-206ENST00000427786 WDR90Q96KV7 1748 aa25.42■■□□□ 1.66
PPP1CB-206ENST00000427786 SENP3-EIF4A1A0A087X0R7 540 aa25.41■■□□□ 1.66
PPP1CB-206ENST00000427786 ALDH1B1P30837 517 aa25.41■■□□□ 1.66
PPP1CB-206ENST00000427786 SLC10A5Q5PT55 438 aa25.41■■□□□ 1.66
PPP1CB-206ENST00000427786 OLFM4Q6UX06 510 aa25.41■■□□□ 1.66
PPP1CB-206ENST00000427786 UTP14AQ9BVJ6 771 aaKnown RBP25.41■■□□□ 1.66
PPP1CB-206ENST00000427786 HYPKQ9NX55 129 aa25.41■■□□□ 1.66
PPP1CB-206ENST00000427786 GLTPD2A6NH11 291 aa25.39■■□□□ 1.66
PPP1CB-206ENST00000427786 IL16Q14005 1332 aa25.38■■□□□ 1.65
PPP1CB-206ENST00000427786 ANKRD13DQ6ZTN6 518 aa25.38■■□□□ 1.65
PPP1CB-206ENST00000427786 TSR2Q969E8 191 aaKnown RBP25.38■■□□□ 1.65
PPP1CB-206ENST00000427786 ISCA1Q9BUE6 129 aa25.38■■□□□ 1.65
PPP1CB-206ENST00000427786 ELL2O00472 640 aaPredicted RBP25.37■■□□□ 1.65
PPP1CB-206ENST00000427786 TOMM70O94826 608 aa25.37■■□□□ 1.65
PPP1CB-206ENST00000427786 FKBP4Q02790 459 aaKnown RBP eCLIP25.37■■□□□ 1.652e-8■■■■■ 37.1
PPP1CB-206ENST00000427786 TSPYL6Q8N831 410 aa25.37■■□□□ 1.65
PPP1CB-206ENST00000427786 CRAMP1Q96RY5 1269 aa25.37■■□□□ 1.65
PPP1CB-206ENST00000427786 RPGRQ92834 1020 aaKnown RBP25.36■■□□□ 1.65
PPP1CB-206ENST00000427786 SLC51AQ86UW1 340 aa25.35■■□□□ 1.65
PPP1CB-206ENST00000427786 SYNE4Q8N205 404 aa25.35■■□□□ 1.65
PPP1CB-206ENST00000427786 PHAXQ9H814 394 aaKnown RBP25.35■■□□□ 1.65
PPP1CB-206ENST00000427786 RTKN2Q8IZC4 609 aa25.34■■□□□ 1.65
PPP1CB-206ENST00000427786 NLRP3Q96P20 1036 aa25.34■■□□□ 1.65
PPP1CB-206ENST00000427786 RRAGCQ9HB90 399 aa25.34■■□□□ 1.65
PPP1CB-206ENST00000427786 LRRC37AA6NMS7 1700 aa25.34■■□□□ 1.65
PPP1CB-206ENST00000427786 SH3TC1Q8TE82 1336 aa25.34■■□□□ 1.65
PPP1CB-206ENST00000427786 COL4A5P29400 1685 aa25.33■■□□□ 1.65
PPP1CB-206ENST00000427786 RBM17Q96I25 401 aaKnown RBP25.33■■□□□ 1.65
PPP1CB-206ENST00000427786 HSPA6P17066 643 aa25.32■■□□□ 1.64
PPP1CB-206ENST00000427786 TRIM28Q13263 835 aaKnown RBP25.32■■□□□ 1.64
PPP1CB-206ENST00000427786 RBM46Q8TBY0 533 aaKnown RBP25.32■■□□□ 1.64
PPP1CB-206ENST00000427786 PSMD1Q99460 953 aa25.32■■□□□ 1.64
PPP1CB-206ENST00000427786 TRMT112Q9UI30 125 aaKnown RBP25.32■■□□□ 1.64
PPP1CB-206ENST00000427786 ABCC4O15439 1325 aa25.32■■□□□ 1.64
PPP1CB-206ENST00000427786 TAF1P21675 1872 aa25.32■■□□□ 1.64
PPP1CB-206ENST00000427786 POTECB2RU33 542 aa25.31■■□□□ 1.64
PPP1CB-206ENST00000427786 HCLS1P14317 486 aaPredicted RBP25.31■■□□□ 1.64
PPP1CB-206ENST00000427786 CCDC30Q5VVM6 783 aa25.31■■□□□ 1.64
PPP1CB-206ENST00000427786 CC2D2BQ6DHV5 1058 aa25.31■■□□□ 1.64
PPP1CB-206ENST00000427786 ZNF277Q9NRM2 450 aaPredicted RBP25.31■■□□□ 1.64
PPP1CB-206ENST00000427786 COL4A1P02462 1669 aa25.3■■□□□ 1.64
PPP1CB-206ENST00000427786 ATP5J2-PTCD1G3V325 749 aa25.3■■□□□ 1.64
PPP1CB-206ENST00000427786 PPEF1O14829 653 aaPredicted RBP25.3■■□□□ 1.64
PPP1CB-206ENST00000427786 FANCIQ9NVI1 1328 aa25.3■■□□□ 1.64
PPP1CB-206ENST00000427786 GOLGA2Q08379 1002 aa25.29■■□□□ 1.64
PPP1CB-206ENST00000427786 WDR63Q8IWG1 891 aa25.29■■□□□ 1.64
PPP1CB-206ENST00000427786 CHMP4AQ9BY43 222 aa25.28■■□□□ 1.64
PPP1CB-206ENST00000427786 VEGFAP15692 232 aaPredicted RBP25.27■■□□□ 1.64
PPP1CB-206ENST00000427786 TWISTNBQ3B726 338 aaPredicted RBP25.27■■□□□ 1.64
PPP1CB-206ENST00000427786 DPY19L2Q6NUT2 758 aa25.27■■□□□ 1.64
PPP1CB-206ENST00000427786 ZNF428Q96B54 188 aa25.27■■□□□ 1.64
PPP1CB-206ENST00000427786 SCN4AP35499 1836 aa25.26■■□□□ 1.63
PPP1CB-206ENST00000427786 CACNA1FO60840 1977 aa25.26■■□□□ 1.63
PPP1CB-206ENST00000427786 IARSP41252 1262 aaKnown RBP25.26■■□□□ 1.63
PPP1CB-206ENST00000427786 GRIPAP1Q4V328 841 aa25.26■■□□□ 1.63
PPP1CB-206ENST00000427786 RIC3Q7Z5B4 369 aa25.26■■□□□ 1.63
PPP1CB-206ENST00000427786 FAM89AQ96GI7 184 aa25.26■■□□□ 1.63
PPP1CB-206ENST00000427786 ATP6V0A2Q9Y487 856 aa25.26■■□□□ 1.63
PPP1CB-206ENST00000427786 DUOX1Q9NRD9 1551 aa25.26■■□□□ 1.63
PPP1CB-206ENST00000427786 C16orf71Q8IYS4 520 aaPredicted RBP25.25■■□□□ 1.63
PPP1CB-206ENST00000427786 FAM9BQ8IZU0 186 aa25.25■■□□□ 1.63
PPP1CB-206ENST00000427786 ZNF541Q9H0D2 1346 aa25.25■■□□□ 1.63
PPP1CB-206ENST00000427786 LTBP1Q14766 1721 aa25.24■■□□□ 1.63
PPP1CB-206ENST00000427786 DDNO94850 711 aaPredicted RBP25.24■■□□□ 1.63
PPP1CB-206ENST00000427786 FSTL1Q12841 308 aa25.24■■□□□ 1.63
PPP1CB-206ENST00000427786 SPINK5Q9NQ38 1064 aaPredicted RBP25.24■■□□□ 1.63
PPP1CB-206ENST00000427786 FZD9O00144 591 aa25.23■■□□□ 1.63
PPP1CB-206ENST00000427786 GRAPQ13588 217 aa25.23■■□□□ 1.63
PPP1CB-206ENST00000427786 SF3B3Q15393 1217 aaKnown RBP25.23■■□□□ 1.63
PPP1CB-206ENST00000427786 GRAPLQ8TC17 118 aaPredicted RBP25.23■■□□□ 1.63
PPP1CB-206ENST00000427786 L3MBTL3Q96JM7 780 aaPredicted RBP25.23■■□□□ 1.63
PPP1CB-206ENST00000427786 MYD88Q99836 296 aa25.23■■□□□ 1.63
PPP1CB-206ENST00000427786 METTL22Q9BUU2 404 aaPredicted RBP25.23■■□□□ 1.63
PPP1CB-206ENST00000427786 SALL2Q9Y467 1007 aaPredicted RBP25.23■■□□□ 1.63
PPP1CB-206ENST00000427786 ZNF521Q96K83 1311 aa25.22■■□□□ 1.63
PPP1CB-206ENST00000427786 ADAMTSL1Q8N6G6 1762 aa25.21■■□□□ 1.63
PPP1CB-206ENST00000427786 BBOX1O75936 387 aa25.21■■□□□ 1.63
PPP1CB-206ENST00000427786 DDX58O95786 925 aaKnown RBP25.21■■□□□ 1.63
PPP1CB-206ENST00000427786 ZBTB38Q8NAP3 1195 aaPredicted RBP25.21■■□□□ 1.63
PPP1CB-206ENST00000427786 CCDC191Q8NCU4 936 aa25.21■■□□□ 1.63
PPP1CB-206ENST00000427786 TCERG1O14776 1098 aaKnown RBP25.2■■□□□ 1.62
PPP1CB-206ENST00000427786 DDX46Q7L014 1031 aaKnown RBP25.2■■□□□ 1.62
PPP1CB-206ENST00000427786 G2E3Q7L622 706 aa25.2■■□□□ 1.62
PPP1CB-206ENST00000427786 STK31Q9BXU1 1019 aa25.2■■□□□ 1.62
PPP1CB-206ENST00000427786 RTFDC1Q9BY42 306 aaPredicted RBP25.2■■□□□ 1.62
PPP1CB-206ENST00000427786 MAP3K2Q9Y2U5 619 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms