RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 PLSCR1O15162 318 aa15.06■□□□□ 0
RFC4-206ENST00000427785 EPHA10Q5JZY3 1008 aa15.06■□□□□ 0
RFC4-206ENST00000427785 PPP1R42Q7Z4L9 355 aa15.06■□□□□ 0
RFC4-206ENST00000427785 NLRP10Q86W26 655 aa15.06■□□□□ 0
RFC4-206ENST00000427785 PDZRN3Q9UPQ7 1066 aa15.06■□□□□ 0
RFC4-206ENST00000427785 TNRC6CQ9HCJ0 1690 aaKnown RBP15.06■□□□□ 0
RFC4-206ENST00000427785 H7C1W4 665 aa15.05■□□□□ -0
RFC4-206ENST00000427785 ATP8B2P98198 1209 aa15.05■□□□□ -0
RFC4-206ENST00000427785 ZNF827Q17R98 1081 aa15.05■□□□□ -0
RFC4-206ENST00000427785 USPL1Q5W0Q7 1092 aa15.05■□□□□ -0
RFC4-206ENST00000427785 ZNF34Q8IZ26 560 aa15.05■□□□□ -0
RFC4-206ENST00000427785 ZNF652Q9Y2D9 606 aa15.05■□□□□ -0
RFC4-206ENST00000427785 USP42Q9H9J4 1324 aaKnown RBP15.04■□□□□ -0
RFC4-206ENST00000427785 SRGAP3O43295 1099 aa15.04■□□□□ -0
RFC4-206ENST00000427785 TRIM28Q13263 835 aaKnown RBP15.04■□□□□ -0
RFC4-206ENST00000427785 ARHGEF1Q92888 912 aaKnown RBP15.04■□□□□ -0
RFC4-206ENST00000427785 BCL2L12Q9HB09 334 aa15.04■□□□□ -0
RFC4-206ENST00000427785 NARFQ9UHQ1 456 aa15.04■□□□□ -0
RFC4-206ENST00000427785 HDAC5Q9UQL6 1122 aa15.04■□□□□ -0
RFC4-206ENST00000427785 TAF1P21675 1872 aa15.03■□□□□ -0
RFC4-206ENST00000427785 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.03■□□□□ -0
RFC4-206ENST00000427785 FAM177BA6PVY3 158 aa15.03■□□□□ -0
RFC4-206ENST00000427785 APBB1O00213 710 aa15.03■□□□□ -0
RFC4-206ENST00000427785 PCCAP05165 728 aaPredicted RBP15.03■□□□□ -0
RFC4-206ENST00000427785 RGS3P49796 1198 aa15.03■□□□□ -0
RFC4-206ENST00000427785 EN1Q05925 392 aaPredicted RBP15.03■□□□□ -0
RFC4-206ENST00000427785 MTX1Q13505 466 aa15.03■□□□□ -0
RFC4-206ENST00000427785 POLA2Q14181 598 aa15.03■□□□□ -0
RFC4-206ENST00000427785 SSH3Q8TE77 659 aa15.03■□□□□ -0
RFC4-206ENST00000427785 GCC1Q96CN9 775 aa15.03■□□□□ -0
RFC4-206ENST00000427785 FAM89AQ96GI7 184 aa15.03■□□□□ -0
RFC4-206ENST00000427785 NIP7Q9Y221 180 aaKnown RBP eCLIP15.03■□□□□ -0
RFC4-206ENST00000427785 EXOC6BQ9Y2D4 811 aa15.03■□□□□ -0
RFC4-206ENST00000427785 A0A1B0GUL6 1792 aa15.03■□□□□ -0
RFC4-206ENST00000427785 LRP5O75197 1615 aa15.03■□□□□ -0
RFC4-206ENST00000427785 AK9Q5TCS8 1911 aa15.02■□□□□ -0
RFC4-206ENST00000427785 ZPR1O75312 459 aa15.02■□□□□ -0
RFC4-206ENST00000427785 SSFA2P28290 1259 aa15.02■□□□□ -0
RFC4-206ENST00000427785 RFC4P35249 363 aa15.02■□□□□ -0
RFC4-206ENST00000427785 EZH2Q15910 746 aaKnown RBP15.02■□□□□ -0
RFC4-206ENST00000427785 BICDL1Q6ZP65 573 aa15.02■□□□□ -0
RFC4-206ENST00000427785 SYNE4Q8N205 404 aa15.02■□□□□ -0
RFC4-206ENST00000427785 DCTPP1Q9H773 170 aa15.02■□□□□ -0
RFC4-206ENST00000427785 CDHR2Q9BYE9 1310 aa15.01□□□□□ -0.01
RFC4-206ENST00000427785 ADRA2BP18089 450 aa15.01□□□□□ -0.01
RFC4-206ENST00000427785 TRAPPC3LQ5T215 181 aa15.01□□□□□ -0.01
RFC4-206ENST00000427785 SUSD4Q5VX71 490 aa15.01□□□□□ -0.01
RFC4-206ENST00000427785 TBC1D9BQ66K14 1250 aa15.01□□□□□ -0.01
RFC4-206ENST00000427785 PELP1Q8IZL8 1130 aaKnown RBP15.01□□□□□ -0.01
RFC4-206ENST00000427785 ZBTB38Q8NAP3 1195 aaPredicted RBP15.01□□□□□ -0.01
RFC4-206ENST00000427785 AKT1S1Q96B36 256 aa15.01□□□□□ -0.01
RFC4-206ENST00000427785 LNPKQ9C0E8 428 aa15.01□□□□□ -0.01
RFC4-206ENST00000427785 TRMT112Q9UI30 125 aaKnown RBP15.01□□□□□ -0.01
RFC4-206ENST00000427785 CHMP3Q9Y3E7 222 aa15.01□□□□□ -0.01
RFC4-206ENST00000427785 NTSR2O95665 410 aa15□□□□□ -0.01
RFC4-206ENST00000427785 PDE4AP27815 886 aa15□□□□□ -0.01
RFC4-206ENST00000427785 FOXO4P98177 505 aa15□□□□□ -0.01
RFC4-206ENST00000427785 NUCB1Q02818 461 aa15□□□□□ -0.01
RFC4-206ENST00000427785 SF3B2Q13435 895 aaKnown RBP15□□□□□ -0.01
RFC4-206ENST00000427785 RABL6Q3YEC7 729 aaPredicted RBP15□□□□□ -0.01
RFC4-206ENST00000427785 PARP10Q53GL7 1025 aa15□□□□□ -0.01
RFC4-206ENST00000427785 ANKRD45Q5TZF3 282 aa15□□□□□ -0.01
RFC4-206ENST00000427785 CLEC4GQ6UXB4 293 aa15□□□□□ -0.01
RFC4-206ENST00000427785 DEFB132Q7Z7B7 95 aa15□□□□□ -0.01
RFC4-206ENST00000427785 CAMKK2Q96RR4 588 aa15□□□□□ -0.01
RFC4-206ENST00000427785 BCL11AQ9H165 835 aa15□□□□□ -0.01
RFC4-206ENST00000427785 ANO8Q9HCE9 1232 aaPredicted RBP15□□□□□ -0.01
RFC4-206ENST00000427785 PA2G4Q9UQ80 394 aaKnown RBP15□□□□□ -0.01
RFC4-206ENST00000427785 ANKRD31Q8N7Z5 1873 aa14.99□□□□□ -0.01
RFC4-206ENST00000427785 ABCC12Q96J65 1359 aa14.99□□□□□ -0.01
RFC4-206ENST00000427785 RGL2O15211 777 aa14.99□□□□□ -0.01
RFC4-206ENST00000427785 SMARCA5O60264 1052 aaPredicted RBP14.99□□□□□ -0.01
RFC4-206ENST00000427785 BAG6P46379 1132 aa14.99□□□□□ -0.01
RFC4-206ENST00000427785 LMBR1LQ6UX01 489 aa14.99□□□□□ -0.01
RFC4-206ENST00000427785 UTP14AQ9BVJ6 771 aaKnown RBP14.99□□□□□ -0.01
RFC4-206ENST00000427785 COL4A1P02462 1669 aa14.99□□□□□ -0.01
RFC4-206ENST00000427785 SH3TC1Q8TE82 1336 aa14.98□□□□□ -0.01
RFC4-206ENST00000427785 NRXN2Q9P2S2 1712 aa14.98□□□□□ -0.01
RFC4-206ENST00000427785 IRS4O14654 1257 aaPredicted RBP14.98□□□□□ -0.01
RFC4-206ENST00000427785 SURF6O75683 361 aaKnown RBP14.98□□□□□ -0.01
RFC4-206ENST00000427785 CHD1LQ86WJ1 897 aa14.98□□□□□ -0.01
RFC4-206ENST00000427785 NUTM1Q86Y26 1132 aa14.98□□□□□ -0.01
RFC4-206ENST00000427785 KLHDC4Q8TBB5 520 aa14.98□□□□□ -0.01
RFC4-206ENST00000427785 PLA2G12BQ9BX93 195 aa14.98□□□□□ -0.01
RFC4-206ENST00000427785 TFCP2L1Q9NZI6 479 aa14.98□□□□□ -0.01
RFC4-206ENST00000427785 CACNA1SQ13698 1873 aa14.97□□□□□ -0.01
RFC4-206ENST00000427785 CTSWP56202 376 aa14.97□□□□□ -0.01
RFC4-206ENST00000427785 FAM161AQ3B820 660 aa14.97□□□□□ -0.01
RFC4-206ENST00000427785 CCDC85AQ96PX6 553 aaPredicted RBP14.97□□□□□ -0.01
RFC4-206ENST00000427785 CARMIL3Q8ND23 1372 aa14.97□□□□□ -0.01
RFC4-206ENST00000427785 PNPLA7Q6ZV29 1317 aa14.96□□□□□ -0.01
RFC4-206ENST00000427785 GYS1P13807 737 aa14.96□□□□□ -0.01
RFC4-206ENST00000427785 HCLS1P14317 486 aaPredicted RBP14.96□□□□□ -0.01
RFC4-206ENST00000427785 RFX5P48382 616 aaPredicted RBP14.96□□□□□ -0.01
RFC4-206ENST00000427785 OS9Q13438 667 aaPredicted RBP14.96□□□□□ -0.01
RFC4-206ENST00000427785 SIL1Q9H173 461 aa14.96□□□□□ -0.01
RFC4-206ENST00000427785 ZBTB47Q9UFB7 747 aaPredicted RBP14.96□□□□□ -0.01
RFC4-206ENST00000427785 COL11A2P13942 1736 aaPredicted RBP14.95□□□□□ -0.02
RFC4-206ENST00000427785 ARAP2Q8WZ64 1704 aa14.95□□□□□ -0.02
RFC4-206ENST00000427785 MSH5O43196 834 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms