RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 C10orf71Q711Q0 1435 aa19.61■□□□□ 0.73
PHF1-203ENST00000427004 DDX58O95786 925 aaKnown RBP19.61■□□□□ 0.73
PHF1-203ENST00000427004 CT47B1P0C2W7 299 aaPredicted RBP19.61■□□□□ 0.73
PHF1-203ENST00000427004 CHRNA5P30532 468 aa19.61■□□□□ 0.73
PHF1-203ENST00000427004 FAM89AQ96GI7 184 aa19.61■□□□□ 0.73
PHF1-203ENST00000427004 RCAN3Q9UKA8 241 aa19.61■□□□□ 0.73
PHF1-203ENST00000427004 COL4A1P02462 1669 aa19.61■□□□□ 0.73
PHF1-203ENST00000427004 NEURL1BA8MQ27 555 aa19.59■□□□□ 0.73
PHF1-203ENST00000427004 NPHP1O15259 732 aa19.59■□□□□ 0.73
PHF1-203ENST00000427004 HCLS1P14317 486 aaPredicted RBP19.59■□□□□ 0.73
PHF1-203ENST00000427004 BEND3Q5T5X7 828 aa19.59■□□□□ 0.73
PHF1-203ENST00000427004 CNBD1Q8NA66 436 aa19.59■□□□□ 0.73
PHF1-203ENST00000427004 A0A0G2JLW4 131 aa19.58■□□□□ 0.72
PHF1-203ENST00000427004 TRIM27P14373 513 aa19.58■□□□□ 0.72
PHF1-203ENST00000427004 TRMT112Q9UI30 125 aaKnown RBP19.58■□□□□ 0.72
PHF1-203ENST00000427004 RLBP1P12271 317 aa19.57■□□□□ 0.72
PHF1-203ENST00000427004 SYT17Q9BSW7 474 aa19.57■□□□□ 0.72
PHF1-203ENST00000427004 UTP14AQ9BVJ6 771 aaKnown RBP19.57■□□□□ 0.72
PHF1-203ENST00000427004 CHMP4AQ9BY43 222 aa19.57■□□□□ 0.72
PHF1-203ENST00000427004 PXDNLA1KZ92 1463 aa19.56■□□□□ 0.72
PHF1-203ENST00000427004 DPEP1P16444 411 aa19.56■□□□□ 0.72
PHF1-203ENST00000427004 HSP90AB3PQ58FF7 597 aa19.56■□□□□ 0.72
PHF1-203ENST00000427004 C20orf194Q5TEA3 1177 aa19.56■□□□□ 0.72
PHF1-203ENST00000427004 CCDC85AQ96PX6 553 aaPredicted RBP19.56■□□□□ 0.72
PHF1-203ENST00000427004 PTPRCP08575 1304 aa19.55■□□□□ 0.72
PHF1-203ENST00000427004 GTF2E1P29083 439 aaPredicted RBP19.55■□□□□ 0.72
PHF1-203ENST00000427004 PANK1Q8TE04 598 aa19.55■□□□□ 0.72
PHF1-203ENST00000427004 CWC25Q9NXE8 425 aaPredicted RBP19.55■□□□□ 0.72
PHF1-203ENST00000427004 BRCA1P38398 1863 aaKnown RBP19.54■□□□□ 0.72
PHF1-203ENST00000427004 BRPF1P55201 1214 aaPredicted RBP19.54■□□□□ 0.72
PHF1-203ENST00000427004 NEXNQ0ZGT2 675 aa19.54■□□□□ 0.72
PHF1-203ENST00000427004 UBE3BQ7Z3V4 1068 aa19.54■□□□□ 0.72
PHF1-203ENST00000427004 DLEC1Q9Y238 1755 aa19.54■□□□□ 0.72
PHF1-203ENST00000427004 KIF16BQ96L93 1317 aa19.53■□□□□ 0.72
PHF1-203ENST00000427004 SPEF2Q9C093 1822 aa19.53■□□□□ 0.72
PHF1-203ENST00000427004 ST5P78524 1137 aa19.53■□□□□ 0.72
PHF1-203ENST00000427004 GCKRQ14397 625 aa19.53■□□□□ 0.72
PHF1-203ENST00000427004 PARP10Q53GL7 1025 aa19.53■□□□□ 0.72
PHF1-203ENST00000427004 ATF7IPQ6VMQ6 1270 aa19.53■□□□□ 0.72
PHF1-203ENST00000427004 TPTE2Q6XPS3 522 aa19.53■□□□□ 0.72
PHF1-203ENST00000427004 PPP1R42Q7Z4L9 355 aa19.53■□□□□ 0.72
PHF1-203ENST00000427004 TMEM57Q8N5G2 664 aa19.53■□□□□ 0.72
PHF1-203ENST00000427004 YY1P25490 414 aa19.52■□□□□ 0.72
PHF1-203ENST00000427004 ZKSCAN2Q63HK3 967 aa19.52■□□□□ 0.72
PHF1-203ENST00000427004 C2CD5Q86YS7 1000 aa19.52■□□□□ 0.72
PHF1-203ENST00000427004 PELP1Q8IZL8 1130 aaKnown RBP19.52■□□□□ 0.72
PHF1-203ENST00000427004 LINS1Q8NG48 757 aa19.52■□□□□ 0.72
PHF1-203ENST00000427004 SRCIN1Q9C0H9 1055 aa19.52■□□□□ 0.72
PHF1-203ENST00000427004 ZNF219Q9P2Y4 722 aaPredicted RBP19.52■□□□□ 0.72
PHF1-203ENST00000427004 MYH3P11055 1940 aa19.51■□□□□ 0.71
PHF1-203ENST00000427004 RGL2O15211 777 aa19.51■□□□□ 0.71
PHF1-203ENST00000427004 NBPF7P0C2Y1 421 aaPredicted RBP19.51■□□□□ 0.71
PHF1-203ENST00000427004 KCNA3P22001 575 aa19.51■□□□□ 0.71
PHF1-203ENST00000427004 CASP7P55210 303 aa19.51■□□□□ 0.71
PHF1-203ENST00000427004 EPHA10Q5JZY3 1008 aa19.51■□□□□ 0.71
PHF1-203ENST00000427004 CCDC191Q8NCU4 936 aa19.51■□□□□ 0.71
PHF1-203ENST00000427004 SLX4Q8IY92 1834 aa19.51■□□□□ 0.71
PHF1-203ENST00000427004 ABCC4O15439 1325 aa19.51■□□□□ 0.71
PHF1-203ENST00000427004 SH3TC1Q8TE82 1336 aa19.51■□□□□ 0.71
PHF1-203ENST00000427004 IRS4O14654 1257 aaPredicted RBP19.5■□□□□ 0.71
PHF1-203ENST00000427004 TRIM28Q13263 835 aaKnown RBP19.5■□□□□ 0.71
PHF1-203ENST00000427004 API5Q9BZZ5 524 aaKnown RBP19.5■□□□□ 0.71
PHF1-203ENST00000427004 NYXQ9GZU5 481 aa19.5■□□□□ 0.71
PHF1-203ENST00000427004 IBTKQ9P2D0 1353 aaPredicted RBP19.49■□□□□ 0.71
PHF1-203ENST00000427004 PCCAP05165 728 aaPredicted RBP19.49■□□□□ 0.71
PHF1-203ENST00000427004 OLFM4Q6UX06 510 aa19.49■□□□□ 0.71
PHF1-203ENST00000427004 CD2APQ9Y5K6 639 aa19.49■□□□□ 0.71
PHF1-203ENST00000427004 H7C1W4 665 aa19.48■□□□□ 0.71
PHF1-203ENST00000427004 ZBTB38Q8NAP3 1195 aaPredicted RBP19.48■□□□□ 0.71
PHF1-203ENST00000427004 ZNF622Q969S3 477 aaKnown RBP eCLIP19.48■□□□□ 0.712e-7■□□□□ 9.4
PHF1-203ENST00000427004 SUCLG2Q96I99 432 aa19.48■□□□□ 0.71
PHF1-203ENST00000427004 MEIS3Q99687 375 aa19.48■□□□□ 0.71
PHF1-203ENST00000427004 BRIP1Q9BX63 1249 aa19.48■□□□□ 0.71
PHF1-203ENST00000427004 DCAF8L1A6NGE4 600 aa19.47■□□□□ 0.71
PHF1-203ENST00000427004 GRM8O00222 908 aa19.46■□□□□ 0.71
PHF1-203ENST00000427004 YBX3P16989 372 aaKnown RBP eCLIP19.46■□□□□ 0.71
PHF1-203ENST00000427004 DZIP1LQ8IYY4 767 aaKnown RBP19.46■□□□□ 0.71
PHF1-203ENST00000427004 ARHGAP45Q92619 1136 aa19.46■□□□□ 0.71
PHF1-203ENST00000427004 KAZALD1Q96I82 304 aa19.46■□□□□ 0.71
PHF1-203ENST00000427004 USP44Q9H0E7 712 aa19.46■□□□□ 0.71
PHF1-203ENST00000427004 SEC31BQ9NQW1 1179 aa19.46■□□□□ 0.71
PHF1-203ENST00000427004 C9orf78Q9NZ63 289 aaPredicted RBP19.46■□□□□ 0.71
PHF1-203ENST00000427004 COG6Q9Y2V7 657 aa19.46■□□□□ 0.71
PHF1-203ENST00000427004 IPO8O15397 1037 aaKnown RBP19.45■□□□□ 0.7
PHF1-203ENST00000427004 ALDH1L1O75891 902 aa19.45■□□□□ 0.7
PHF1-203ENST00000427004 IRX6P78412 446 aaPredicted RBP19.45■□□□□ 0.7
PHF1-203ENST00000427004 SLC10A5Q5PT55 438 aa19.45■□□□□ 0.7
PHF1-203ENST00000427004 C1orf115Q9H7X2 142 aa19.45■□□□□ 0.7
PHF1-203ENST00000427004 SUPT16HQ9Y5B9 1047 aaKnown RBP19.45■□□□□ 0.7
PHF1-203ENST00000427004 H0YIN7 160 aa19.44■□□□□ 0.7
PHF1-203ENST00000427004 SRGNP10124 158 aa19.44■□□□□ 0.7
PHF1-203ENST00000427004 RRP1P56182 461 aaKnown RBP19.44■□□□□ 0.7
PHF1-203ENST00000427004 ITPRIPQ8IWB1 547 aa19.44■□□□□ 0.7
PHF1-203ENST00000427004 FTSJ3Q8IY81 847 aaKnown RBP19.44■□□□□ 0.7
PHF1-203ENST00000427004 BCS1LQ9Y276 419 aa19.44■□□□□ 0.7
PHF1-203ENST00000427004 PDE6BP35913 854 aa19.43■□□□□ 0.7
PHF1-203ENST00000427004 FOXO4P98177 505 aa19.43■□□□□ 0.7
PHF1-203ENST00000427004 INTS3Q68E01 1043 aaKnown RBP19.43■□□□□ 0.7
PHF1-203ENST00000427004 CDHR2Q9BYE9 1310 aa19.43■□□□□ 0.7
PHF1-203ENST00000427004 CCT4P50991 539 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms