RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 NUP98P52948 1817 aa21.42■■□□□ 1.02
FN1-208ENST00000426059 MX1P20591 662 aa21.41■■□□□ 1.02
FN1-208ENST00000426059 MFAP1P55081 439 aaKnown RBP21.41■■□□□ 1.02
FN1-208ENST00000426059 RABL6Q3YEC7 729 aaPredicted RBP21.4■■□□□ 1.02
FN1-208ENST00000426059 HSP90AB4PQ58FF6 505 aa21.4■■□□□ 1.02
FN1-208ENST00000426059 SBF2Q86WG5 1849 aa21.4■■□□□ 1.02
FN1-208ENST00000426059 NHSQ6T4R5 1651 aa21.4■■□□□ 1.02
FN1-208ENST00000426059 MSH5O43196 834 aa21.39■■□□□ 1.01
FN1-208ENST00000426059 SASH1O94885 1247 aa21.39■■□□□ 1.01
FN1-208ENST00000426059 SDSP20132 328 aa21.39■■□□□ 1.01
FN1-208ENST00000426059 RFX5P48382 616 aaPredicted RBP21.39■■□□□ 1.01
FN1-208ENST00000426059 COL5A3P25940 1745 aaPredicted RBP21.38■■□□□ 1.01
FN1-208ENST00000426059 G3BP1Q13283 466 aaKnown RBP eCLIP21.38■■□□□ 1.012e-85■□□□□ 8.8
FN1-208ENST00000426059 TBC1D9Q6ZT07 1266 aa21.38■■□□□ 1.01
FN1-208ENST00000426059 NLRP10Q86W26 655 aa21.38■■□□□ 1.01
FN1-208ENST00000426059 PTPN12Q05209 780 aaKnown RBP21.38■■□□□ 1.01
FN1-208ENST00000426059 TRIM28Q13263 835 aaKnown RBP21.38■■□□□ 1.01
FN1-208ENST00000426059 CCDC85AQ96PX6 553 aaPredicted RBP21.38■■□□□ 1.01
FN1-208ENST00000426059 OSBPL3Q9H4L5 887 aa21.38■■□□□ 1.01
FN1-208ENST00000426059 BRWD3Q6RI45 1802 aa21.37■■□□□ 1.01
FN1-208ENST00000426059 COL15A1P39059 1388 aa21.37■■□□□ 1.01
FN1-208ENST00000426059 FAM177BA6PVY3 158 aa21.36■■□□□ 1.01
FN1-208ENST00000426059 ERVV-1B6SEH8 477 aa21.36■■□□□ 1.01
FN1-208ENST00000426059 UBN2Q6ZU65 1347 aa21.36■■□□□ 1.01
FN1-208ENST00000426059 ANKRD36CQ5JPF3 1778 aa21.36■■□□□ 1.01
FN1-208ENST00000426059 CICQ96RK0 1608 aaPredicted RBP21.36■■□□□ 1.01
FN1-208ENST00000426059 RREB1Q92766 1687 aa21.35■■□□□ 1.01
FN1-208ENST00000426059 ZBTB38Q8NAP3 1195 aaPredicted RBP21.35■■□□□ 1.01
FN1-208ENST00000426059 CCNL1Q9UK58 526 aaPredicted RBP21.35■■□□□ 1.01
FN1-208ENST00000426059 CAMTA2O94983 1202 aa21.34■■□□□ 1.01
FN1-208ENST00000426059 PCCAP05165 728 aaPredicted RBP21.34■■□□□ 1.01
FN1-208ENST00000426059 HSP90AB3PQ58FF7 597 aa21.34■■□□□ 1.01
FN1-208ENST00000426059 CLASRPQ8N2M8 674 aaKnown RBP21.34■■□□□ 1.01
FN1-208ENST00000426059 ZNF594Q96JF6 807 aaPredicted RBP21.34■■□□□ 1.01
FN1-208ENST00000426059 IPO9Q96P70 1041 aaKnown RBP21.34■■□□□ 1.01
FN1-208ENST00000426059 MAP4K4O95819 1239 aaPredicted RBP21.34■■□□□ 1.01
FN1-208ENST00000426059 COPRSQ9NQ92 184 aa21.34■■□□□ 1.01
FN1-208ENST00000426059 STAP2Q9UGK3 403 aa21.34■■□□□ 1.01
FN1-208ENST00000426059 TRMT112Q9UI30 125 aaKnown RBP21.34■■□□□ 1.01
FN1-208ENST00000426059 CDC45O75419 566 aa21.33■■□□□ 1.01
FN1-208ENST00000426059 KRT27Q7Z3Y8 459 aa21.33■■□□□ 1.01
FN1-208ENST00000426059 ERC1Q8IUD2 1116 aa21.33■■□□□ 1.01
FN1-208ENST00000426059 UPF2Q9HAU5 1272 aaKnown RBP21.33■■□□□ 1.01
FN1-208ENST00000426059 AACSQ86V21 672 aa21.33■■□□□ 1
FN1-208ENST00000426059 ZNF34Q8IZ26 560 aa21.33■■□□□ 1
FN1-208ENST00000426059 EAF2Q96CJ1 260 aaPredicted RBP21.32■■□□□ 1
FN1-208ENST00000426059 CCDC8Q9H0W5 538 aaPredicted RBP21.32■■□□□ 1
FN1-208ENST00000426059 TRIM6-TRIM34B2RNG4 842 aa21.32■■□□□ 1
FN1-208ENST00000426059 RILPL2Q969X0 211 aa21.32■■□□□ 1
FN1-208ENST00000426059 ZNF831Q5JPB2 1677 aa21.31■■□□□ 1
FN1-208ENST00000426059 TLR7Q9NYK1 1049 aaKnown RBP21.31■■□□□ 1
FN1-208ENST00000426059 IFIT2P09913 472 aaKnown RBP21.31■■□□□ 1
FN1-208ENST00000426059 SUSD4Q5VX71 490 aa21.31■■□□□ 1
FN1-208ENST00000426059 AMIGO3Q86WK7 504 aa21.31■■□□□ 1
FN1-208ENST00000426059 PI4K2BQ8TCG2 481 aa21.31■■□□□ 1
FN1-208ENST00000426059 TBC1D32Q96NH3 1257 aa21.31■■□□□ 1
FN1-208ENST00000426059 TUBGCP6Q96RT7 1819 aa21.3■■□□□ 1
FN1-208ENST00000426059 TRIM37O94972 964 aa21.3■■□□□ 1
FN1-208ENST00000426059 TFCP2Q12800 502 aa21.3■■□□□ 1
FN1-208ENST00000426059 BCL11BQ9C0K0 894 aaPredicted RBP21.3■■□□□ 1
FN1-208ENST00000426059 GNPATO15228 680 aa21.29■■□□□ 1
FN1-208ENST00000426059 CNTNAP4Q9C0A0 1308 aa21.29■■□□□ 1
FN1-208ENST00000426059 IRS4O14654 1257 aaPredicted RBP21.29■■□□□ 1
FN1-208ENST00000426059 LRRC24Q50LG9 513 aa21.29■■□□□ 1
FN1-208ENST00000426059 ZNF772Q68DY9 489 aaPredicted RBP21.29■■□□□ 1
FN1-208ENST00000426059 PUS3Q9BZE2 481 aaKnown RBP21.29■■□□□ 1
FN1-208ENST00000426059 C22orf23Q9BZE7 217 aa21.29■■□□□ 1
FN1-208ENST00000426059 NIP7Q9Y221 180 aaKnown RBP eCLIP21.29■■□□□ 13e-33■□□□□ 11
FN1-208ENST00000426059 LRRC4BQ9NT99 713 aa21.28■■□□□ 1
FN1-208ENST00000426059 LY75O60449 1722 aa21.28■■□□□ 1
FN1-208ENST00000426059 RBM6P78332 1123 aaKnown RBP21.28■■□□□ 1
FN1-208ENST00000426059 FAM196AQ6ZSG2 479 aa21.28■■□□□ 1
FN1-208ENST00000426059 SLC4A3P48751 1232 aa21.27■■□□□ 1
FN1-208ENST00000426059 ATG9AQ7Z3C6 839 aa21.27■■□□□ 1
FN1-208ENST00000426059 TAF1LQ8IZX4 1826 aa21.27■□□□□ 0.99
FN1-208ENST00000426059 HCLS1P14317 486 aaPredicted RBP21.26■□□□□ 0.99
FN1-208ENST00000426059 CCDC57Q2TAC2 916 aa21.26■□□□□ 0.99
FN1-208ENST00000426059 SRP68Q9UHB9 627 aaKnown RBP21.26■□□□□ 0.99
FN1-208ENST00000426059 CDHR2Q9BYE9 1310 aa21.26■□□□□ 0.99
FN1-208ENST00000426059 BICDL1Q6ZP65 573 aa21.26■□□□□ 0.99
FN1-208ENST00000426059 TTLL11Q8NHH1 800 aa21.26■□□□□ 0.99
FN1-208ENST00000426059 PLA2G12BQ9BX93 195 aa21.26■□□□□ 0.99
FN1-208ENST00000426059 GREM2Q9H772 168 aa21.26■□□□□ 0.99
FN1-208ENST00000426059 CSF1RP07333 972 aa21.25■□□□□ 0.99
FN1-208ENST00000426059 AOX1Q06278 1338 aa21.25■□□□□ 0.99
FN1-208ENST00000426059 RPS6KA4O75676 772 aa21.25■□□□□ 0.99
FN1-208ENST00000426059 ECHDC1Q9NTX5 307 aa21.25■□□□□ 0.99
FN1-208ENST00000426059 PHF14O94880 888 aa21.24■□□□□ 0.99
FN1-208ENST00000426059 CTSWP56202 376 aa21.24■□□□□ 0.99
FN1-208ENST00000426059 RC3H1Q5TC82 1133 aaKnown RBP21.24■□□□□ 0.99
FN1-208ENST00000426059 USPL1Q5W0Q7 1092 aa21.24■□□□□ 0.99
FN1-208ENST00000426059 MYH3P11055 1940 aa21.24■□□□□ 0.99
FN1-208ENST00000426059 TNNI3KQ59H18 835 aa21.24■□□□□ 0.99
FN1-208ENST00000426059 UTP14AQ9BVJ6 771 aaKnown RBP21.24■□□□□ 0.99
FN1-208ENST00000426059 FPGT-TNNI3KV9GXZ4 949 aa21.24■□□□□ 0.99
FN1-208ENST00000426059 BCORQ6W2J9 1755 aa21.23■□□□□ 0.99
FN1-208ENST00000426059 IFIT5Q13325 482 aaKnown RBP21.23■□□□□ 0.99
FN1-208ENST00000426059 TTC41PQ6P2S7 1318 aa21.23■□□□□ 0.99
FN1-208ENST00000426059 USP42Q9H9J4 1324 aaKnown RBP21.23■□□□□ 0.99
FN1-208ENST00000426059 AK9Q5TCS8 1911 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms