RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 JARID2Q92833 1246 aaPredicted RBP18.72■□□□□ 0.59
ACTB-204ENST00000425660 PCCAP05165 728 aaPredicted RBP18.72■□□□□ 0.59
ACTB-204ENST00000425660 ZNF772Q68DY9 489 aaPredicted RBP18.72■□□□□ 0.59
ACTB-204ENST00000425660 TBC1D32Q96NH3 1257 aa18.72■□□□□ 0.59
ACTB-204ENST00000425660 CDC45O75419 566 aa18.71■□□□□ 0.59
ACTB-204ENST00000425660 SDSP20132 328 aa18.71■□□□□ 0.59
ACTB-204ENST00000425660 PTPN12Q05209 780 aaKnown RBP18.71■□□□□ 0.59
ACTB-204ENST00000425660 TBC1D9Q6ZT07 1266 aa18.71■□□□□ 0.59
ACTB-204ENST00000425660 PTF1AQ7RTS3 328 aa18.71■□□□□ 0.59
ACTB-204ENST00000425660 ZBTB38Q8NAP3 1195 aaPredicted RBP18.71■□□□□ 0.59
ACTB-204ENST00000425660 USP42Q9H9J4 1324 aaKnown RBP18.71■□□□□ 0.59
ACTB-204ENST00000425660 OS9Q13438 667 aaPredicted RBP18.7■□□□□ 0.58
ACTB-204ENST00000425660 FAM182BQ5T319 152 aa18.7■□□□□ 0.58
ACTB-204ENST00000425660 NLRP10Q86W26 655 aa18.7■□□□□ 0.58
ACTB-204ENST00000425660 PLA2G12BQ9BX93 195 aa18.7■□□□□ 0.58
ACTB-204ENST00000425660 BCL11AQ9H165 835 aa18.7■□□□□ 0.58
ACTB-204ENST00000425660 MYH14Q7Z406 1995 aaKnown RBP18.7■□□□□ 0.58
ACTB-204ENST00000425660 BTAF1O14981 1849 aa18.7■□□□□ 0.58
ACTB-204ENST00000425660 SASH1O94885 1247 aa18.7■□□□□ 0.58
ACTB-204ENST00000425660 G3BP1Q13283 466 aaKnown RBP eCLIP18.7■□□□□ 0.581e-23■□□□□ 10.8
ACTB-204ENST00000425660 LMBR1LQ6UX01 489 aa18.7■□□□□ 0.58
ACTB-204ENST00000425660 CLASRPQ8N2M8 674 aaKnown RBP18.7■□□□□ 0.58
ACTB-204ENST00000425660 ANKRD36CQ5JPF3 1778 aa18.69■□□□□ 0.58
ACTB-204ENST00000425660 CDHR2Q9BYE9 1310 aa18.69■□□□□ 0.58
ACTB-204ENST00000425660 CNTNAP4Q9C0A0 1308 aa18.69■□□□□ 0.58
ACTB-204ENST00000425660 TBC1D2BQ9UPU7 963 aa18.69■□□□□ 0.58
ACTB-204ENST00000425660 ZNF34Q8IZ26 560 aa18.68■□□□□ 0.58
ACTB-204ENST00000425660 LINC00116Q8NCU8 138 aa18.68■□□□□ 0.58
ACTB-204ENST00000425660 ARXQ96QS3 562 aa18.68■□□□□ 0.58
ACTB-204ENST00000425660 TUBGCP6Q96RT7 1819 aa18.68■□□□□ 0.58
ACTB-204ENST00000425660 EIF5BO60841 1220 aaKnown RBP18.67■□□□□ 0.58
ACTB-204ENST00000425660 KLHDC4Q8TBB5 520 aa18.67■□□□□ 0.58
ACTB-204ENST00000425660 NUP98P52948 1817 aa18.67■□□□□ 0.58
ACTB-204ENST00000425660 SBF2Q86WG5 1849 aa18.67■□□□□ 0.58
ACTB-204ENST00000425660 TTC41PQ6P2S7 1318 aa18.67■□□□□ 0.58
ACTB-204ENST00000425660 EP400Q96L91 3159 aa18.67■□□□□ 0.58
ACTB-204ENST00000425660 MSH5O43196 834 aa18.67■□□□□ 0.58
ACTB-204ENST00000425660 CAMTA2O94983 1202 aa18.67■□□□□ 0.58
ACTB-204ENST00000425660 TSHZ3Q63HK5 1081 aa18.67■□□□□ 0.58
ACTB-204ENST00000425660 NUTM1Q86Y26 1132 aa18.67■□□□□ 0.58
ACTB-204ENST00000425660 PI4K2BQ8TCG2 481 aa18.67■□□□□ 0.58
ACTB-204ENST00000425660 DDRGK1Q96HY6 314 aa18.67■□□□□ 0.58
ACTB-204ENST00000425660 RGL2O15211 777 aa18.66■□□□□ 0.58
ACTB-204ENST00000425660 MFAP1P55081 439 aaKnown RBP18.66■□□□□ 0.58
ACTB-204ENST00000425660 RTL5Q5HYW3 569 aaPredicted RBP18.66■□□□□ 0.58
ACTB-204ENST00000425660 RC3H1Q5TC82 1133 aaKnown RBP18.66■□□□□ 0.58
ACTB-204ENST00000425660 RBM6P78332 1123 aaKnown RBP18.65■□□□□ 0.58
ACTB-204ENST00000425660 FAM89AQ96GI7 184 aa18.65■□□□□ 0.58
ACTB-204ENST00000425660 SIL1Q9H173 461 aa18.65■□□□□ 0.58
ACTB-204ENST00000425660 UBN2Q6ZU65 1347 aa18.65■□□□□ 0.58
ACTB-204ENST00000425660 LY75O60449 1722 aa18.65■□□□□ 0.58
ACTB-204ENST00000425660 CSF1RP07333 972 aa18.65■□□□□ 0.58
ACTB-204ENST00000425660 GPTP24298 496 aa18.65■□□□□ 0.58
ACTB-204ENST00000425660 RXRBP28702 533 aa18.65■□□□□ 0.58
ACTB-204ENST00000425660 BCL11BQ9C0K0 894 aaPredicted RBP18.65■□□□□ 0.58
ACTB-204ENST00000425660 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.65■□□□□ 0.58
ACTB-204ENST00000425660 C22orf23Q9BZE7 217 aa18.64■□□□□ 0.57
ACTB-204ENST00000425660 RBM25P49756 843 aaKnown RBP18.63■□□□□ 0.57
ACTB-204ENST00000425660 EAF2Q96CJ1 260 aaPredicted RBP18.63■□□□□ 0.57
ACTB-204ENST00000425660 IFIT2P09913 472 aaKnown RBP18.63■□□□□ 0.57
ACTB-204ENST00000425660 CASC1Q6TDU7 716 aa18.63■□□□□ 0.57
ACTB-204ENST00000425660 CLEC4GQ6UXB4 293 aa18.63■□□□□ 0.57
ACTB-204ENST00000425660 ECHDC1Q9NTX5 307 aa18.63■□□□□ 0.57
ACTB-204ENST00000425660 GLRX3O76003 335 aaKnown RBP18.62■□□□□ 0.57
ACTB-204ENST00000425660 AACSQ86V21 672 aa18.62■□□□□ 0.57
ACTB-204ENST00000425660 CCNL1Q9UK58 526 aaPredicted RBP18.62■□□□□ 0.57
ACTB-204ENST00000425660 FBXO3Q9UK99 471 aa18.62■□□□□ 0.57
ACTB-204ENST00000425660 BCORQ6W2J9 1755 aa18.61■□□□□ 0.57
ACTB-204ENST00000425660 ERC2O15083 957 aa18.61■□□□□ 0.57
ACTB-204ENST00000425660 CIAO1O76071 339 aa18.61■□□□□ 0.57
ACTB-204ENST00000425660 PARP10Q53GL7 1025 aa18.61■□□□□ 0.57
ACTB-204ENST00000425660 FAM196AQ6ZSG2 479 aa18.61■□□□□ 0.57
ACTB-204ENST00000425660 ATG9AQ7Z3C6 839 aa18.61■□□□□ 0.57
ACTB-204ENST00000425660 GPATCH3Q96I76 525 aa18.61■□□□□ 0.57
ACTB-204ENST00000425660 AK7Q96M32 723 aa18.61■□□□□ 0.57
ACTB-204ENST00000425660 TRMT112Q9UI30 125 aaKnown RBP18.61■□□□□ 0.57
ACTB-204ENST00000425660 KCNQ4P56696 695 aa18.6■□□□□ 0.57
ACTB-204ENST00000425660 KRT27Q7Z3Y8 459 aa18.6■□□□□ 0.57
ACTB-204ENST00000425660 ZNF652Q9Y2D9 606 aa18.6■□□□□ 0.57
ACTB-204ENST00000425660 CHMP3Q9Y3E7 222 aa18.6■□□□□ 0.57
ACTB-204ENST00000425660 RPS6KA4O75676 772 aa18.6■□□□□ 0.57
ACTB-204ENST00000425660 IL15P40933 162 aaPredicted RBP18.6■□□□□ 0.57
ACTB-204ENST00000425660 SYNE4Q8N205 404 aa18.6■□□□□ 0.57
ACTB-204ENST00000425660 EYA2O00167 538 aa18.59■□□□□ 0.57
ACTB-204ENST00000425660 IRS4O14654 1257 aaPredicted RBP18.59■□□□□ 0.57
ACTB-204ENST00000425660 CTSWP56202 376 aa18.59■□□□□ 0.57
ACTB-204ENST00000425660 CCDC57Q2TAC2 916 aa18.59■□□□□ 0.57
ACTB-204ENST00000425660 TTLL11Q8NHH1 800 aa18.59■□□□□ 0.57
ACTB-204ENST00000425660 GPR108Q9NPR9 543 aa18.59■□□□□ 0.57
ACTB-204ENST00000425660 TRIM6-TRIM34B2RNG4 842 aa18.58■□□□□ 0.57
ACTB-204ENST00000425660 TFCP2Q12800 502 aa18.58■□□□□ 0.57
ACTB-204ENST00000425660 TNNI3KQ59H18 835 aa18.58■□□□□ 0.57
ACTB-204ENST00000425660 SUSD4Q5VX71 490 aa18.58■□□□□ 0.57
ACTB-204ENST00000425660 FPGT-TNNI3KV9GXZ4 949 aa18.58■□□□□ 0.57
ACTB-204ENST00000425660 PDE8AO60658 829 aa18.58■□□□□ 0.56
ACTB-204ENST00000425660 SH3TC1Q8TE82 1336 aa18.57■□□□□ 0.56
ACTB-204ENST00000425660 BRWD3Q6RI45 1802 aa18.57■□□□□ 0.56
ACTB-204ENST00000425660 SCN7AQ01118 1682 aa18.57■□□□□ 0.56
ACTB-204ENST00000425660 RILPL2Q969X0 211 aa18.57■□□□□ 0.56
ACTB-204ENST00000425660 UTP14AQ9BVJ6 771 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms