RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 SLC27A2O14975 620 aa8.96□□□□□ -0.98
SMARCC1-202ENST00000425518 PSMA5P28066 241 aa8.96□□□□□ -0.98
SMARCC1-202ENST00000425518 EDC3Q96F86 508 aaKnown RBP8.96□□□□□ -0.98
SMARCC1-202ENST00000425518 FUCA2Q9BTY2 467 aa8.96□□□□□ -0.98
SMARCC1-202ENST00000425518 TM6SF1Q9BZW5 370 aa8.96□□□□□ -0.98
SMARCC1-202ENST00000425518 NUP62CLQ9H1M0 184 aa8.96□□□□□ -0.98
SMARCC1-202ENST00000425518 PRDM10Q9NQV6 1147 aa8.96□□□□□ -0.98
SMARCC1-202ENST00000425518 PYCARDQ9ULZ3 195 aa8.96□□□□□ -0.98
SMARCC1-202ENST00000425518 CCDC9Q9Y3X0 531 aaKnown RBP8.96□□□□□ -0.98
SMARCC1-202ENST00000425518 TAF6LQ9Y6J9 622 aa8.96□□□□□ -0.98
SMARCC1-202ENST00000425518 RGPD1P0DJD0 1748 aa8.96□□□□□ -0.98
SMARCC1-202ENST00000425518 SASH1O94885 1247 aa8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 HMGN5P82970 282 aaKnown RBP8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 MTERF4Q7Z6M4 381 aaKnown RBP8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 LUZP1Q86V48 1076 aa8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 BICC1Q9H694 974 aaKnown RBP8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 TCHHQ07283 1943 aa8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 A0A0D9SFI3 127 aa8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 HOXB7P09629 217 aa8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 MAP3K11Q16584 847 aa8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 ESCO1Q5FWF5 840 aa8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 PRIMPOLQ96LW4 560 aa8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 DACT1Q9NYF0 836 aa8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 GRM8O00222 908 aa8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 ALDH1L1O75891 902 aa8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 AKAP4Q5JQC9 854 aa8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 RNF20Q5VTR2 975 aa8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 LARP1Q6PKG0 1096 aaKnown RBP8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 RIC3Q7Z5B4 369 aa8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 THEMISQ8N1K5 641 aaPredicted RBP8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 MAP4K1Q92918 833 aa8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 USP42Q9H9J4 1324 aaKnown RBP8.95□□□□□ -0.98
SMARCC1-202ENST00000425518 GIGYF1O75420 1035 aaPredicted RBP8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 MYL6BP14649 208 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 SPATA32Q96LK8 384 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 TNMDQ9H2S6 317 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 HDAC5Q9UQL6 1122 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 KIF3AQ9Y496 699 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 GOLGA6L6A8MZA4 724 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 RNMTO43148 476 aaKnown RBP8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 PDCP20941 246 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 FOSBP53539 338 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 MTX1Q13505 466 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 KCNF1Q9H3M0 494 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 NDUFB9Q9Y6M9 179 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 CEMIPQ8WUJ3 1361 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 PXDNLA1KZ92 1463 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 PTGS1P23219 599 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 CEBPZQ03701 1054 aaKnown RBP8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 TYRO3Q06418 890 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 FAM200AQ8TCP9 573 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 BICD2Q8TD16 824 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 DDX11Q96FC9 970 aa8.94□□□□□ -0.98
SMARCC1-202ENST00000425518 HIP1O00291 1037 aa8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 FGD1P98174 961 aa8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 CHAF1AQ13111 956 aaPredicted RBP8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 HSP90B1P14625 803 aaKnown RBP8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 ANO6Q4KMQ2 910 aa8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 ZNF589Q86UQ0 364 aaPredicted RBP8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 LINS1Q8NG48 757 aa8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 KIAA1524Q8TCG1 905 aa8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 TRIM5Q9C035 493 aa8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 JAK2O60674 1132 aa8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 DDX58O95786 925 aaKnown RBP8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 SLC39A6Q13433 755 aa8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 CCDC186Q7Z3E2 898 aa8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 KAZALD1Q96I82 304 aa8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 BCL11BQ9C0K0 894 aaPredicted RBP8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 MRVI1Q9Y6F6 885 aa8.93□□□□□ -0.98
SMARCC1-202ENST00000425518 PPFIA3O75145 1194 aa8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 RPS6KB1P23443 525 aa8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 ANKRD1Q15327 319 aa8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 KCNB2Q92953 911 aa8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 LRRC2Q9BYS8 371 aa8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 SPTLC3Q9NUV7 552 aa8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 XRN1Q8IZH2 1706 aaKnown RBP8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 H3BQV1 296 aa8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 CHGBP05060 677 aa8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 PIP4K2AP48426 406 aaPredicted RBP8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 CBX1P83916 185 aa8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 IFFO2Q5TF58 517 aa8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 ZNF710Q8N1W2 664 aa8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 DNAJC2Q99543 621 aaKnown RBP8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 SCAND2PQ9GZW5 306 aaPredicted RBP8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 NAP1L2Q9ULW6 460 aaPredicted RBP8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 SETD1BQ9UPS6 1966 aaKnown RBP8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 LRMPQ12912 555 aa8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 CBX8Q9HC52 389 aa8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 NRBP1Q9UHY1 535 aa8.92□□□□□ -0.98
SMARCC1-202ENST00000425518 RIOK3O14730 519 aaKnown RBP8.91□□□□□ -0.98
SMARCC1-202ENST00000425518 TOB2Q14106 344 aaPredicted RBP8.91□□□□□ -0.98
SMARCC1-202ENST00000425518 AMOTQ4VCS5 1084 aa8.91□□□□□ -0.98
SMARCC1-202ENST00000425518 CCDC129Q6ZRS4 1044 aa8.91□□□□□ -0.98
SMARCC1-202ENST00000425518 LEO1Q8WVC0 666 aaPredicted RBP8.91□□□□□ -0.98
SMARCC1-202ENST00000425518 CCDC94Q9BW85 323 aaPredicted RBP8.91□□□□□ -0.98
SMARCC1-202ENST00000425518 TPM3P06753 285 aa8.91□□□□□ -0.98
SMARCC1-202ENST00000425518 NEXNQ0ZGT2 675 aa8.91□□□□□ -0.98
SMARCC1-202ENST00000425518 MYD88Q99836 296 aa8.91□□□□□ -0.98
SMARCC1-202ENST00000425518 DNAJC25Q9H1X3 360 aa8.91□□□□□ -0.98
SMARCC1-202ENST00000425518 BCL2L12Q9HB09 334 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 924.8 ms