RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 RNF123Q5XPI4 1314 aa34.01■■■■□ 3.03
CDK9-202ENST00000421939 CACNA1SQ13698 1873 aa34■■■■□ 3.03
CDK9-202ENST00000421939 STK31Q9BXU1 1019 aa34■■■■□ 3.03
CDK9-202ENST00000421939 PRPF40BQ6NWY9 871 aaKnown RBP33.99■■■■□ 3.03
CDK9-202ENST00000421939 SLX4Q8IY92 1834 aa33.97■■■■□ 3.03
CDK9-202ENST00000421939 EXOSC9Q06265 439 aaKnown RBP33.97■■■■□ 3.03
CDK9-202ENST00000421939 CRY2Q49AN0 593 aa33.97■■■■□ 3.03
CDK9-202ENST00000421939 RIC3Q7Z5B4 369 aa33.97■■■■□ 3.03
CDK9-202ENST00000421939 ISCA1Q9BUE6 129 aa33.96■■■■□ 3.03
CDK9-202ENST00000421939 TCERG1O14776 1098 aaKnown RBP33.95■■■■□ 3.03
CDK9-202ENST00000421939 C21orf2O43822 256 aa33.95■■■■□ 3.03
CDK9-202ENST00000421939 DDX58O95786 925 aaKnown RBP33.94■■■■□ 3.02
CDK9-202ENST00000421939 ZNF219Q9P2Y4 722 aaPredicted RBP33.94■■■■□ 3.02
CDK9-202ENST00000421939 ATP5J2-PTCD1G3V325 749 aa33.93■■■■□ 3.02
CDK9-202ENST00000421939 RASSF7Q02833 373 aa33.93■■■■□ 3.02
CDK9-202ENST00000421939 C9orf131Q5VYM1 1079 aa33.93■■■■□ 3.02
CDK9-202ENST00000421939 TRMT112Q9UI30 125 aaKnown RBP33.93■■■■□ 3.02
CDK9-202ENST00000421939 SLC10A5Q5PT55 438 aa33.92■■■■□ 3.02
CDK9-202ENST00000421939 SH3TC1Q8TE82 1336 aa33.92■■■■□ 3.02
CDK9-202ENST00000421939 NFKBIEO00221 500 aa33.91■■■■□ 3.02
CDK9-202ENST00000421939 VAMP4O75379 141 aa33.91■■■■□ 3.02
CDK9-202ENST00000421939 MIER1Q8N108 512 aa33.91■■■■□ 3.02
CDK9-202ENST00000421939 RPGRQ92834 1020 aaKnown RBP33.91■■■■□ 3.02
CDK9-202ENST00000421939 ALDH1B1P30837 517 aa33.9■■■■□ 3.02
CDK9-202ENST00000421939 TRIM28Q13263 835 aaKnown RBP33.9■■■■□ 3.02
CDK9-202ENST00000421939 SOGA3Q5TF21 947 aa33.9■■■■□ 3.02
CDK9-202ENST00000421939 C3orf67Q6ZVT6 689 aa33.9■■■■□ 3.02
CDK9-202ENST00000421939 RNF181Q9P0P0 153 aa33.9■■■■□ 3.02
CDK9-202ENST00000421939 SBF1O95248 1867 aa33.9■■■■□ 3.02
CDK9-202ENST00000421939 SLC4A2P04920 1241 aa33.89■■■■□ 3.02
CDK9-202ENST00000421939 NLRP3Q96P20 1036 aa33.89■■■■□ 3.02
CDK9-202ENST00000421939 FER1L6Q2WGJ9 1857 aa33.88■■■■□ 3.01
CDK9-202ENST00000421939 HOXA10P31260 410 aaPredicted RBP33.88■■■■□ 3.01
CDK9-202ENST00000421939 ZNF428Q96B54 188 aa33.88■■■■□ 3.01
CDK9-202ENST00000421939 SYNE4Q8N205 404 aa33.87■■■■□ 3.01
CDK9-202ENST00000421939 C7orf43Q8WVR3 580 aa33.87■■■■□ 3.01
CDK9-202ENST00000421939 MYD88Q99836 296 aa33.87■■■■□ 3.01
CDK9-202ENST00000421939 HCLS1P14317 486 aaPredicted RBP33.86■■■■□ 3.01
CDK9-202ENST00000421939 LMNB1P20700 586 aa33.86■■■■□ 3.01
CDK9-202ENST00000421939 G2E3Q7L622 706 aa33.86■■■■□ 3.01
CDK9-202ENST00000421939 METTL22Q9BUU2 404 aaPredicted RBP33.86■■■■□ 3.01
CDK9-202ENST00000421939 MAP3K2Q9Y2U5 619 aa33.86■■■■□ 3.01
CDK9-202ENST00000421939 LAMB2P55268 1798 aa33.85■■■■□ 3.01
CDK9-202ENST00000421939 CACNA1FO60840 1977 aa33.85■■■■□ 3.01
CDK9-202ENST00000421939 E9PSI1 815 aa33.85■■■■□ 3.01
CDK9-202ENST00000421939 KSR2Q6VAB6 950 aa33.85■■■■□ 3.01
CDK9-202ENST00000421939 RBM17Q96I25 401 aaKnown RBP33.85■■■■□ 3.01
CDK9-202ENST00000421939 PI4KAP2A4QPH2 592 aa33.84■■■■□ 3.01
CDK9-202ENST00000421939 CCDC93Q567U6 631 aa33.84■■■■□ 3.01
CDK9-202ENST00000421939 PI4KAP1Q8N8J0 262 aa33.84■■■■□ 3.01
CDK9-202ENST00000421939 ZNF526Q8TF50 670 aaPredicted RBP33.84■■■■□ 3.01
CDK9-202ENST00000421939 DDX60Q8IY21 1712 aaKnown RBP33.84■■■■□ 3.01
CDK9-202ENST00000421939 LTBP3Q9NS15 1303 aa33.83■■■■□ 3.01
CDK9-202ENST00000421939 PRELPP51888 382 aa33.83■■■■□ 3.01
CDK9-202ENST00000421939 FLIIQ13045 1269 aa33.83■■■■□ 3.01
CDK9-202ENST00000421939 FAM89AQ96GI7 184 aa33.83■■■■□ 3.01
CDK9-202ENST00000421939 CRAMP1Q96RY5 1269 aa33.83■■■■□ 3.01
CDK9-202ENST00000421939 TAOK3Q9H2K8 898 aa33.83■■■■□ 3.01
CDK9-202ENST00000421939 GPBP1L1Q9HC44 474 aaPredicted RBP33.82■■■■□ 3
CDK9-202ENST00000421939 CCDC191Q8NCU4 936 aa33.81■■■■□ 3
CDK9-202ENST00000421939 TIAM2Q8IVF5 1701 aa33.79■■■■□ 3
CDK9-202ENST00000421939 OLFM4Q6UX06 510 aa33.79■■■■□ 3
CDK9-202ENST00000421939 CWC25Q9NXE8 425 aaPredicted RBP33.79■■■■□ 3
CDK9-202ENST00000421939 ZC3H4Q9UPT8 1303 aaKnown RBP33.79■■■■□ 3
CDK9-202ENST00000421939 CCDC88AQ3V6T2 1871 aa33.78■■■■□ 3
CDK9-202ENST00000421939 SLFN5Q08AF3 891 aa33.78■■■■□ 3
CDK9-202ENST00000421939 NEXNQ0ZGT2 675 aa33.78■■■■□ 3
CDK9-202ENST00000421939 FKBP5Q13451 457 aaPredicted RBP33.78■■■■□ 3
CDK9-202ENST00000421939 RTL5Q5HYW3 569 aaPredicted RBP33.78■■■■□ 3
CDK9-202ENST00000421939 ZBTB38Q8NAP3 1195 aaPredicted RBP33.78■■■■□ 3
CDK9-202ENST00000421939 ABCC4O15439 1325 aa33.77■■■■□ 3
CDK9-202ENST00000421939 IRS4O14654 1257 aaPredicted RBP33.76■■■□□ 2.99
CDK9-202ENST00000421939 PPEF1O14829 653 aaPredicted RBP33.76■■■□□ 2.99
CDK9-202ENST00000421939 IGKV5-2P06315 115 aa33.76■■■□□ 2.99
CDK9-202ENST00000421939 RTKN2Q8IZC4 609 aa33.76■■■□□ 2.99
CDK9-202ENST00000421939 SNED1Q8TER0 1413 aa33.75■■■□□ 2.99
CDK9-202ENST00000421939 PCCAP05165 728 aaPredicted RBP33.74■■■□□ 2.99
CDK9-202ENST00000421939 FKBP4Q02790 459 aaKnown RBP eCLIP33.74■■■□□ 2.99
CDK9-202ENST00000421939 CC2D2BQ6DHV5 1058 aa33.74■■■□□ 2.99
CDK9-202ENST00000421939 CDCA7LQ96GN5 454 aa33.74■■■□□ 2.99
CDK9-202ENST00000421939 DDX46Q7L014 1031 aaKnown RBP33.73■■■□□ 2.99
CDK9-202ENST00000421939 DICER1Q9UPY3 1922 aaKnown RBP33.73■■■□□ 2.99
CDK9-202ENST00000421939 HSP90B1P14625 803 aaKnown RBP33.72■■■□□ 2.99
CDK9-202ENST00000421939 DNAAF4Q8WXU2 420 aa33.72■■■□□ 2.99
CDK9-202ENST00000421939 SF3B3Q15393 1217 aaKnown RBP33.71■■■□□ 2.99
CDK9-202ENST00000421939 NEURL1BA8MQ27 555 aa33.7■■■□□ 2.99
CDK9-202ENST00000421939 CWF19L2Q2TBE0 894 aaKnown RBP33.7■■■□□ 2.99
CDK9-202ENST00000421939 GRAPQ13588 217 aa33.69■■■□□ 2.98
CDK9-202ENST00000421939 SLC51AQ86UW1 340 aa33.69■■■□□ 2.98
CDK9-202ENST00000421939 GRAPLQ8TC17 118 aaPredicted RBP33.69■■■□□ 2.98
CDK9-202ENST00000421939 GRIPAP1Q4V328 841 aa33.68■■■□□ 2.98
CDK9-202ENST00000421939 ATP6V0A2Q9Y487 856 aa33.68■■■□□ 2.98
CDK9-202ENST00000421939 KDM2BQ8NHM5 1336 aa33.68■■■□□ 2.98
CDK9-202ENST00000421939 BBOX1O75936 387 aa33.67■■■□□ 2.98
CDK9-202ENST00000421939 TRMT2AQ8IZ69 625 aaKnown RBP33.67■■■□□ 2.98
CDK9-202ENST00000421939 JARID2Q92833 1246 aaPredicted RBP33.67■■■□□ 2.98
CDK9-202ENST00000421939 PSMD1Q99460 953 aa33.67■■■□□ 2.98
CDK9-202ENST00000421939 ZNF277Q9NRM2 450 aaPredicted RBP33.67■■■□□ 2.98
CDK9-202ENST00000421939 CDHR2Q9BYE9 1310 aa33.67■■■□□ 2.98
CDK9-202ENST00000421939 TMX4Q9H1E5 349 aaPredicted RBP33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms