RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 ISCA1Q9BUE6 129 aa22.89■■□□□ 1.25
MSL3-208ENST00000421368 PDZRN3Q9UPQ7 1066 aa22.89■■□□□ 1.25
MSL3-208ENST00000421368 DDX60Q8IY21 1712 aaKnown RBP22.88■■□□□ 1.25
MSL3-208ENST00000421368 DALRD3Q5D0E6 543 aaKnown RBP22.88■■□□□ 1.25
MSL3-208ENST00000421368 RIC1Q4ADV7 1423 aa22.88■■□□□ 1.25
MSL3-208ENST00000421368 KLRG2A4D1S0 409 aaPredicted RBP22.87■■□□□ 1.25
MSL3-208ENST00000421368 ATP5J2-PTCD1G3V325 749 aa22.87■■□□□ 1.25
MSL3-208ENST00000421368 DDX58O95786 925 aaKnown RBP22.87■■□□□ 1.25
MSL3-208ENST00000421368 UTP14AQ9BVJ6 771 aaKnown RBP22.87■■□□□ 1.25
MSL3-208ENST00000421368 ADCY9O60503 1353 aa22.87■■□□□ 1.25
MSL3-208ENST00000421368 SRGNP10124 158 aa22.86■■□□□ 1.25
MSL3-208ENST00000421368 HNRNPUQ00839 825 aaKnown RBP eCLIP22.86■■□□□ 1.25
MSL3-208ENST00000421368 FLIIQ13045 1269 aa22.85■■□□□ 1.25
MSL3-208ENST00000421368 KSR2Q6VAB6 950 aa22.85■■□□□ 1.25
MSL3-208ENST00000421368 TTLL6Q8N841 843 aa22.85■■□□□ 1.25
MSL3-208ENST00000421368 ZNF622Q969S3 477 aaKnown RBP eCLIP22.85■■□□□ 1.252e-6■■■□□ 18.8
MSL3-208ENST00000421368 ZNF428Q96B54 188 aa22.85■■□□□ 1.25
MSL3-208ENST00000421368 MAP3K2Q9Y2U5 619 aa22.85■■□□□ 1.25
MSL3-208ENST00000421368 SBF1O95248 1867 aa22.85■■□□□ 1.25
MSL3-208ENST00000421368 RNF123Q5XPI4 1314 aa22.84■■□□□ 1.25
MSL3-208ENST00000421368 PI4KAP2A4QPH2 592 aa22.84■■□□□ 1.25
MSL3-208ENST00000421368 TRIM28Q13263 835 aaKnown RBP22.84■■□□□ 1.25
MSL3-208ENST00000421368 PI4KAP1Q8N8J0 262 aa22.84■■□□□ 1.25
MSL3-208ENST00000421368 MYD88Q99836 296 aa22.84■■□□□ 1.25
MSL3-208ENST00000421368 METTL22Q9BUU2 404 aaPredicted RBP22.84■■□□□ 1.25
MSL3-208ENST00000421368 TRMT112Q9UI30 125 aaKnown RBP22.84■■□□□ 1.25
MSL3-208ENST00000421368 CCDC88AQ3V6T2 1871 aa22.83■■□□□ 1.25
MSL3-208ENST00000421368 STYK1Q6J9G0 422 aa22.83■■□□□ 1.25
MSL3-208ENST00000421368 SYNE4Q8N205 404 aa22.83■■□□□ 1.25
MSL3-208ENST00000421368 MASTLQ96GX5 879 aa22.83■■□□□ 1.25
MSL3-208ENST00000421368 FER1L6Q2WGJ9 1857 aa22.82■■□□□ 1.24
MSL3-208ENST00000421368 SLC10A5Q5PT55 438 aa22.82■■□□□ 1.24
MSL3-208ENST00000421368 TAF1P21675 1872 aa22.81■■□□□ 1.24
MSL3-208ENST00000421368 NPR1P16066 1061 aa22.81■■□□□ 1.24
MSL3-208ENST00000421368 FKBP5Q13451 457 aaPredicted RBP22.81■■□□□ 1.24
MSL3-208ENST00000421368 CRY2Q49AN0 593 aa22.81■■□□□ 1.24
MSL3-208ENST00000421368 C3orf67Q6ZVT6 689 aa22.81■■□□□ 1.24
MSL3-208ENST00000421368 SH3TC1Q8TE82 1336 aa22.81■■□□□ 1.24
MSL3-208ENST00000421368 CNKSR1Q969H4 720 aa22.8■■□□□ 1.24
MSL3-208ENST00000421368 MYH3P11055 1940 aa22.79■■□□□ 1.24
MSL3-208ENST00000421368 HCLS1P14317 486 aaPredicted RBP22.79■■□□□ 1.24
MSL3-208ENST00000421368 YY1P25490 414 aa22.79■■□□□ 1.24
MSL3-208ENST00000421368 ARHGAP27Q6ZUM4 889 aa22.79■■□□□ 1.24
MSL3-208ENST00000421368 IGKV5-2P06315 115 aa22.78■■□□□ 1.24
MSL3-208ENST00000421368 PRPF40BQ6NWY9 871 aaKnown RBP22.78■■□□□ 1.24
MSL3-208ENST00000421368 CCDC191Q8NCU4 936 aa22.78■■□□□ 1.24
MSL3-208ENST00000421368 FAM89AQ96GI7 184 aa22.78■■□□□ 1.24
MSL3-208ENST00000421368 MRPL50Q8N5N7 158 aaKnown RBP22.77■■□□□ 1.24
MSL3-208ENST00000421368 NLRP3Q96P20 1036 aa22.77■■□□□ 1.24
MSL3-208ENST00000421368 CWC25Q9NXE8 425 aaPredicted RBP22.77■■□□□ 1.24
MSL3-208ENST00000421368 NEXNQ0ZGT2 675 aa22.76■■□□□ 1.23
MSL3-208ENST00000421368 RTL5Q5HYW3 569 aaPredicted RBP22.76■■□□□ 1.23
MSL3-208ENST00000421368 DNAAF4Q8WXU2 420 aa22.76■■□□□ 1.23
MSL3-208ENST00000421368 SSH1Q8WYL5 1049 aa22.76■■□□□ 1.23
MSL3-208ENST00000421368 ZNF219Q9P2Y4 722 aaPredicted RBP22.76■■□□□ 1.23
MSL3-208ENST00000421368 C21orf2O43822 256 aa22.75■■□□□ 1.23
MSL3-208ENST00000421368 HOXA10P31260 410 aaPredicted RBP22.75■■□□□ 1.23
MSL3-208ENST00000421368 CWF19L2Q2TBE0 894 aaKnown RBP22.75■■□□□ 1.23
MSL3-208ENST00000421368 ZBTB38Q8NAP3 1195 aaPredicted RBP22.75■■□□□ 1.23
MSL3-208ENST00000421368 RPGRQ92834 1020 aaKnown RBP22.75■■□□□ 1.23
MSL3-208ENST00000421368 ZBED9Q6R2W3 1325 aa22.75■■□□□ 1.23
MSL3-208ENST00000421368 NEURL1BA8MQ27 555 aa22.74■■□□□ 1.23
MSL3-208ENST00000421368 F6X3S4 739 aa22.74■■□□□ 1.23
MSL3-208ENST00000421368 CT47B1P0C2W7 299 aaPredicted RBP22.74■■□□□ 1.23
MSL3-208ENST00000421368 DICER1Q9UPY3 1922 aaKnown RBP22.74■■□□□ 1.23
MSL3-208ENST00000421368 PCCAP05165 728 aaPredicted RBP22.73■■□□□ 1.23
MSL3-208ENST00000421368 ALDH1B1P30837 517 aa22.73■■□□□ 1.23
MSL3-208ENST00000421368 ALDH1L2Q3SY69 923 aa22.73■■□□□ 1.23
MSL3-208ENST00000421368 C7orf43Q8WVR3 580 aa22.73■■□□□ 1.23
MSL3-208ENST00000421368 BCL2L13Q9BXK5 485 aa22.73■■□□□ 1.23
MSL3-208ENST00000421368 IRS4O14654 1257 aaPredicted RBP22.72■■□□□ 1.23
MSL3-208ENST00000421368 JARID2Q92833 1246 aaPredicted RBP22.72■■□□□ 1.23
MSL3-208ENST00000421368 RBM17Q96I25 401 aaKnown RBP22.72■■□□□ 1.23
MSL3-208ENST00000421368 CRAMP1Q96RY5 1269 aa22.72■■□□□ 1.23
MSL3-208ENST00000421368 RASSF7Q02833 373 aa22.71■■□□□ 1.23
MSL3-208ENST00000421368 LINS1Q8NG48 757 aa22.71■■□□□ 1.23
MSL3-208ENST00000421368 NFKBIEO00221 500 aa22.7■■□□□ 1.22
MSL3-208ENST00000421368 SMC4Q9NTJ3 1288 aa22.7■■□□□ 1.22
MSL3-208ENST00000421368 COL4A1P02462 1669 aa22.69■■□□□ 1.22
MSL3-208ENST00000421368 ABCC4O15439 1325 aa22.69■■□□□ 1.22
MSL3-208ENST00000421368 CDHR2Q9BYE9 1310 aa22.69■■□□□ 1.22
MSL3-208ENST00000421368 GCKRQ14397 625 aa22.69■■□□□ 1.22
MSL3-208ENST00000421368 BEND3Q5T5X7 828 aa22.69■■□□□ 1.22
MSL3-208ENST00000421368 OLFM4Q6UX06 510 aa22.69■■□□□ 1.22
MSL3-208ENST00000421368 TIAM2Q8IVF5 1701 aa22.68■■□□□ 1.22
MSL3-208ENST00000421368 SF3B3Q15393 1217 aaKnown RBP22.68■■□□□ 1.22
MSL3-208ENST00000421368 SOGA3Q5TF21 947 aa22.68■■□□□ 1.22
MSL3-208ENST00000421368 PTPRCP08575 1304 aa22.67■■□□□ 1.22
MSL3-208ENST00000421368 H7C1W4 665 aa22.67■■□□□ 1.22
MSL3-208ENST00000421368 PRELPP51888 382 aa22.67■■□□□ 1.22
MSL3-208ENST00000421368 SLC51AQ86UW1 340 aa22.67■■□□□ 1.22
MSL3-208ENST00000421368 SNED1Q8TER0 1413 aa22.66■■□□□ 1.22
MSL3-208ENST00000421368 LRRC37AA6NMS7 1700 aa22.66■■□□□ 1.22
MSL3-208ENST00000421368 PDE8AO60658 829 aa22.66■■□□□ 1.22
MSL3-208ENST00000421368 HSP90B1P14625 803 aaKnown RBP22.66■■□□□ 1.22
MSL3-208ENST00000421368 RARSP54136 660 aaKnown RBP22.66■■□□□ 1.22
MSL3-208ENST00000421368 CCDC93Q567U6 631 aa22.66■■□□□ 1.22
MSL3-208ENST00000421368 C9orf131Q5VYM1 1079 aa22.66■■□□□ 1.22
MSL3-208ENST00000421368 DDX46Q7L014 1031 aaKnown RBP22.66■■□□□ 1.22
MSL3-208ENST00000421368 UBE3BQ7Z3V4 1068 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms