RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 PTPN12Q05209 780 aaKnown RBP22.92■■□□□ 1.26
CROCCP3-202ENST00000420820 KIAA1211Q6ZU35 1233 aa22.92■■□□□ 1.26
CROCCP3-202ENST00000420820 KLHDC4Q8TBB5 520 aa22.92■■□□□ 1.26
CROCCP3-202ENST00000420820 CCDC8Q9H0W5 538 aaPredicted RBP22.92■■□□□ 1.26
CROCCP3-202ENST00000420820 TLR7Q9NYK1 1049 aaKnown RBP22.92■■□□□ 1.26
CROCCP3-202ENST00000420820 TJP1Q07157 1748 aa22.91■■□□□ 1.26
CROCCP3-202ENST00000420820 TOGARAM1Q9Y4F4 1720 aa22.91■■□□□ 1.26
CROCCP3-202ENST00000420820 LMBRD1Q9NUN5 540 aa22.91■■□□□ 1.26
CROCCP3-202ENST00000420820 MRE11P49959 708 aa22.9■■□□□ 1.26
CROCCP3-202ENST00000420820 SIL1Q9H173 461 aa22.9■■□□□ 1.26
CROCCP3-202ENST00000420820 HIP1O00291 1037 aa22.9■■□□□ 1.26
CROCCP3-202ENST00000420820 BRD1O95696 1058 aa22.9■■□□□ 1.26
CROCCP3-202ENST00000420820 UBE3BQ7Z3V4 1068 aa22.9■■□□□ 1.26
CROCCP3-202ENST00000420820 H7C1W4 665 aa22.89■■□□□ 1.25
CROCCP3-202ENST00000420820 PTH1RQ03431 593 aa22.89■■□□□ 1.25
CROCCP3-202ENST00000420820 MCTP1Q6DN14 999 aa22.89■■□□□ 1.25
CROCCP3-202ENST00000420820 A0A087WZG4 1122 aa22.88■■□□□ 1.25
CROCCP3-202ENST00000420820 ATP5J2-PTCD1G3V325 749 aa22.88■■□□□ 1.25
CROCCP3-202ENST00000420820 PTCD1O75127 700 aaKnown RBP22.88■■□□□ 1.25
CROCCP3-202ENST00000420820 JARID2Q92833 1246 aaPredicted RBP22.87■■□□□ 1.25
CROCCP3-202ENST00000420820 NECTIN1Q15223 517 aa22.86■■□□□ 1.25
CROCCP3-202ENST00000420820 TM6SF1Q9BZW5 370 aa22.86■■□□□ 1.25
CROCCP3-202ENST00000420820 CCDC171Q6TFL3 1326 aa22.86■■□□□ 1.25
CROCCP3-202ENST00000420820 FOXO4P98177 505 aa22.86■■□□□ 1.25
CROCCP3-202ENST00000420820 TTLL7Q6ZT98 887 aa22.86■■□□□ 1.25
CROCCP3-202ENST00000420820 GAS2L3Q86XJ1 694 aa22.86■■□□□ 1.25
CROCCP3-202ENST00000420820 GRPEL1Q9HAV7 217 aa22.86■■□□□ 1.25
CROCCP3-202ENST00000420820 DDX49Q9Y6V7 483 aaKnown RBP22.86■■□□□ 1.25
CROCCP3-202ENST00000420820 TNNI3KQ59H18 835 aa22.85■■□□□ 1.25
CROCCP3-202ENST00000420820 FPGT-TNNI3KV9GXZ4 949 aa22.85■■□□□ 1.25
CROCCP3-202ENST00000420820 ATP5JP18859 108 aa22.84■■□□□ 1.25
CROCCP3-202ENST00000420820 NMIQ13287 307 aaPredicted RBP22.84■■□□□ 1.25
CROCCP3-202ENST00000420820 MAP4K1Q92918 833 aa22.84■■□□□ 1.25
CROCCP3-202ENST00000420820 BOLA2Q9H3K6 86 aa22.84■■□□□ 1.25
CROCCP3-202ENST00000420820 DBNLQ9UJU6 430 aaKnown RBP22.84■■□□□ 1.25
CROCCP3-202ENST00000420820 JCADQ9P266 1359 aa22.84■■□□□ 1.25
CROCCP3-202ENST00000420820 A1BGP04217 495 aa22.84■■□□□ 1.25
CROCCP3-202ENST00000420820 NOL8Q76FK4 1167 aaKnown RBP22.84■■□□□ 1.25
CROCCP3-202ENST00000420820 FAM227BQ96M60 508 aa22.84■■□□□ 1.25
CROCCP3-202ENST00000420820 MED23Q9ULK4 1368 aa22.83■■□□□ 1.25
CROCCP3-202ENST00000420820 AK2P54819 239 aa22.83■■□□□ 1.25
CROCCP3-202ENST00000420820 TFCP2Q12800 502 aa22.83■■□□□ 1.25
CROCCP3-202ENST00000420820 ZSWIM6Q9HCJ5 1215 aa22.83■■□□□ 1.25
CROCCP3-202ENST00000420820 RUFY3Q7L099 469 aa22.82■■□□□ 1.24
CROCCP3-202ENST00000420820 DDX54Q8TDD1 881 aaKnown RBP22.82■■□□□ 1.24
CROCCP3-202ENST00000420820 PANK2Q9BZ23 570 aa22.82■■□□□ 1.24
CROCCP3-202ENST00000420820 STRN4Q9NRL3 753 aa22.82■■□□□ 1.24
CROCCP3-202ENST00000420820 CWC25Q9NXE8 425 aaPredicted RBP22.82■■□□□ 1.24
CROCCP3-202ENST00000420820 LIMCH1Q9UPQ0 1083 aa22.82■■□□□ 1.24
CROCCP3-202ENST00000420820 RFX7Q2KHR2 1363 aa22.82■■□□□ 1.24
CROCCP3-202ENST00000420820 EVA1CP58658 441 aa22.81■■□□□ 1.24
CROCCP3-202ENST00000420820 PRPF40BQ6NWY9 871 aaKnown RBP22.81■■□□□ 1.24
CROCCP3-202ENST00000420820 LMBR1LQ6UX01 489 aa22.81■■□□□ 1.24
CROCCP3-202ENST00000420820 CCDC191Q8NCU4 936 aa22.81■■□□□ 1.24
CROCCP3-202ENST00000420820 A0A0D9SFI3 127 aa22.8■■□□□ 1.24
CROCCP3-202ENST00000420820 VPS53Q5VIR6 699 aa22.8■■□□□ 1.24
CROCCP3-202ENST00000420820 CASTP20810 708 aaKnown RBP22.8■■□□□ 1.24
CROCCP3-202ENST00000420820 ADCK5Q3MIX3 580 aa22.8■■□□□ 1.24
CROCCP3-202ENST00000420820 FSD1Q9BTV5 496 aa22.8■■□□□ 1.24
CROCCP3-202ENST00000420820 RBM8AQ9Y5S9 174 aaKnown RBP22.8■■□□□ 1.24
CROCCP3-202ENST00000420820 RPAP1Q9BWH6 1393 aaPredicted RBP22.79■■□□□ 1.24
CROCCP3-202ENST00000420820 ZNF445P59923 1031 aa22.79■■□□□ 1.24
CROCCP3-202ENST00000420820 ITGB4P16144 1822 aa22.79■■□□□ 1.24
CROCCP3-202ENST00000420820 PRPF40AO75400 957 aaKnown RBP22.78■■□□□ 1.24
CROCCP3-202ENST00000420820 CREB3L3Q68CJ9 461 aa22.78■■□□□ 1.24
CROCCP3-202ENST00000420820 ATG9AQ7Z3C6 839 aa22.78■■□□□ 1.24
CROCCP3-202ENST00000420820 GPT2Q8TD30 523 aa22.78■■□□□ 1.24
CROCCP3-202ENST00000420820 ARXQ96QS3 562 aa22.78■■□□□ 1.24
CROCCP3-202ENST00000420820 GPR108Q9NPR9 543 aa22.78■■□□□ 1.24
CROCCP3-202ENST00000420820 DISP2A7MBM2 1401 aa22.77■■□□□ 1.24
CROCCP3-202ENST00000420820 VSIG10Q8N0Z9 540 aa22.77■■□□□ 1.24
CROCCP3-202ENST00000420820 CHAMP1Q96JM3 812 aa22.77■■□□□ 1.24
CROCCP3-202ENST00000420820 JAKMIP1Q96N16 626 aaKnown RBP22.77■■□□□ 1.24
CROCCP3-202ENST00000420820 ISCA1Q9BUE6 129 aa22.77■■□□□ 1.24
CROCCP3-202ENST00000420820 COL14A1Q05707 1796 aaKnown RBP22.77■■□□□ 1.23
CROCCP3-202ENST00000420820 CPA1P15085 419 aa22.76■■□□□ 1.23
CROCCP3-202ENST00000420820 HAUS7Q99871 368 aa22.76■■□□□ 1.23
CROCCP3-202ENST00000420820 TMOD3Q9NYL9 352 aa22.76■■□□□ 1.23
CROCCP3-202ENST00000420820 CYP46A1Q9Y6A2 500 aa22.76■■□□□ 1.23
CROCCP3-202ENST00000420820 WDR33Q9C0J8 1336 aaKnown RBP22.76■■□□□ 1.23
CROCCP3-202ENST00000420820 SLC27A2O14975 620 aa22.76■■□□□ 1.23
CROCCP3-202ENST00000420820 ZKSCAN1P17029 563 aaPredicted RBP22.76■■□□□ 1.23
CROCCP3-202ENST00000420820 DBNDD2Q9BQY9 259 aa22.76■■□□□ 1.23
CROCCP3-202ENST00000420820 ATG3Q9NT62 314 aa22.76■■□□□ 1.23
CROCCP3-202ENST00000420820 PDRG1Q9NUG6 133 aa22.76■■□□□ 1.23
CROCCP3-202ENST00000420820 TSGA10IPQ3SY00 556 aa22.75■■□□□ 1.23
CROCCP3-202ENST00000420820 FAM43AQ8N2R8 423 aa22.75■■□□□ 1.23
CROCCP3-202ENST00000420820 ZBTB3Q9H5J0 574 aa22.75■■□□□ 1.23
CROCCP3-202ENST00000420820 TRIM28Q13263 835 aaKnown RBP22.74■■□□□ 1.23
CROCCP3-202ENST00000420820 USPL1Q5W0Q7 1092 aa22.74■■□□□ 1.23
CROCCP3-202ENST00000420820 EDC3Q96F86 508 aaKnown RBP22.74■■□□□ 1.23
CROCCP3-202ENST00000420820 ZSCAN31Q96LW9 406 aaPredicted RBP22.74■■□□□ 1.23
CROCCP3-202ENST00000420820 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.74■■□□□ 1.23
CROCCP3-202ENST00000420820 PLCH1Q4KWH8 1693 aa22.74■■□□□ 1.23
CROCCP3-202ENST00000420820 LRP6O75581 1613 aa22.74■■□□□ 1.23
CROCCP3-202ENST00000420820 TAF5LO75529 589 aa22.74■■□□□ 1.23
CROCCP3-202ENST00000420820 FOXD4L5Q5VV16 416 aaPredicted RBP22.74■■□□□ 1.23
CROCCP3-202ENST00000420820 ZNF589Q86UQ0 364 aaPredicted RBP22.74■■□□□ 1.23
CROCCP3-202ENST00000420820 FOXD4L4Q8WXT5 416 aaPredicted RBP22.74■■□□□ 1.23
CROCCP3-202ENST00000420820 TEX13AQ9BXU3 409 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms