RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 COPRSQ9NQ92 184 aa19.55■□□□□ 0.72
CTSB-203ENST00000420692 SLAIN2Q9P270 581 aa19.55■□□□□ 0.72
CTSB-203ENST00000420692 UBR2Q8IWV8 1755 aa19.55■□□□□ 0.72
CTSB-203ENST00000420692 PRPF40AO75400 957 aaKnown RBP19.55■□□□□ 0.72
CTSB-203ENST00000420692 KIAA1211Q6ZU35 1233 aa19.55■□□□□ 0.72
CTSB-203ENST00000420692 TOM1L2Q6ZVM7 507 aa19.55■□□□□ 0.72
CTSB-203ENST00000420692 GPT2Q8TD30 523 aa19.55■□□□□ 0.72
CTSB-203ENST00000420692 RUFY3Q7L099 469 aa19.54■□□□□ 0.72
CTSB-203ENST00000420692 SHANK3Q9BYB0 1731 aa19.54■□□□□ 0.72
CTSB-203ENST00000420692 COL15A1P39059 1388 aa19.54■□□□□ 0.72
CTSB-203ENST00000420692 AK2P54819 239 aa19.53■□□□□ 0.72
CTSB-203ENST00000420692 ADCK5Q3MIX3 580 aa19.53■□□□□ 0.72
CTSB-203ENST00000420692 PLBD2Q8NHP8 589 aa19.53■□□□□ 0.72
CTSB-203ENST00000420692 LARP6Q9BRS8 491 aaKnown RBP19.53■□□□□ 0.72
CTSB-203ENST00000420692 BOLA2Q9H3K6 86 aa19.53■□□□□ 0.72
CTSB-203ENST00000420692 NMIQ13287 307 aaPredicted RBP19.53■□□□□ 0.72
CTSB-203ENST00000420692 NKX1-1Q15270 411 aaPredicted RBP19.53■□□□□ 0.72
CTSB-203ENST00000420692 RUFY2Q8WXA3 655 aa19.53■□□□□ 0.72
CTSB-203ENST00000420692 KCPQ6ZWJ8 1503 aa19.53■□□□□ 0.72
CTSB-203ENST00000420692 PCDH11XQ9BZA7 1347 aa19.53■□□□□ 0.72
CTSB-203ENST00000420692 PCDH11YQ9BZA8 1340 aa19.53■□□□□ 0.72
CTSB-203ENST00000420692 ZNF335Q9H4Z2 1342 aaPredicted RBP19.53■□□□□ 0.72
CTSB-203ENST00000420692 NECTIN1Q15223 517 aa19.52■□□□□ 0.72
CTSB-203ENST00000420692 TTLL7Q6ZT98 887 aa19.52■□□□□ 0.72
CTSB-203ENST00000420692 SNRKQ9NRH2 765 aa19.52■□□□□ 0.72
CTSB-203ENST00000420692 ABCA3Q99758 1704 aa19.52■□□□□ 0.72
CTSB-203ENST00000420692 A0A087WZG4 1122 aa19.52■□□□□ 0.71
CTSB-203ENST00000420692 COL9A3Q14050 684 aaPredicted RBP19.52■□□□□ 0.71
CTSB-203ENST00000420692 NSFL1CQ9UNZ2 370 aaKnown RBP19.52■□□□□ 0.71
CTSB-203ENST00000420692 ERVV-2B6SEH9 535 aa19.51■□□□□ 0.71
CTSB-203ENST00000420692 PRPF40BQ6NWY9 871 aaKnown RBP19.51■□□□□ 0.71
CTSB-203ENST00000420692 FAM43AQ8N2R8 423 aa19.51■□□□□ 0.71
CTSB-203ENST00000420692 DBNLQ9UJU6 430 aaKnown RBP19.51■□□□□ 0.71
CTSB-203ENST00000420692 CCDC171Q6TFL3 1326 aa19.51■□□□□ 0.71
CTSB-203ENST00000420692 A0A0D9SFI3 127 aa19.51■□□□□ 0.71
CTSB-203ENST00000420692 A1BGP04217 495 aa19.51■□□□□ 0.71
CTSB-203ENST00000420692 TFCP2Q12800 502 aa19.51■□□□□ 0.71
CTSB-203ENST00000420692 EDC3Q96F86 508 aaKnown RBP19.51■□□□□ 0.71
CTSB-203ENST00000420692 PAPPAQ13219 1627 aa19.5■□□□□ 0.71
CTSB-203ENST00000420692 CASTP20810 708 aaKnown RBP19.5■□□□□ 0.71
CTSB-203ENST00000420692 CAVIN1Q6NZI2 390 aaKnown RBP19.5■□□□□ 0.71
CTSB-203ENST00000420692 CARD10Q9BWT7 1032 aa19.5■□□□□ 0.71
CTSB-203ENST00000420692 NUP188Q5SRE5 1749 aa19.5■□□□□ 0.71
CTSB-203ENST00000420692 RPAP1Q9BWH6 1393 aaPredicted RBP19.5■□□□□ 0.71
CTSB-203ENST00000420692 H7C1W4 665 aa19.49■□□□□ 0.71
CTSB-203ENST00000420692 LARGE1O95461 756 aa19.49■□□□□ 0.71
CTSB-203ENST00000420692 FOXO4P98177 505 aa19.49■□□□□ 0.71
CTSB-203ENST00000420692 MAP4K1Q92918 833 aa19.49■□□□□ 0.71
CTSB-203ENST00000420692 ZSWIM6Q9HCJ5 1215 aa19.49■□□□□ 0.71
CTSB-203ENST00000420692 RRAGDQ9NQL2 400 aaPredicted RBP19.49■□□□□ 0.71
CTSB-203ENST00000420692 RBM27Q9P2N5 1060 aaKnown RBP19.49■□□□□ 0.71
CTSB-203ENST00000420692 ERBB4Q15303 1308 aa19.49■□□□□ 0.71
CTSB-203ENST00000420692 IL2RBP14784 551 aa19.48■□□□□ 0.71
CTSB-203ENST00000420692 ZNF445P59923 1031 aa19.48■□□□□ 0.71
CTSB-203ENST00000420692 ZSCAN23Q3MJ62 389 aa19.48■□□□□ 0.71
CTSB-203ENST00000420692 TNNI3KQ59H18 835 aa19.48■□□□□ 0.71
CTSB-203ENST00000420692 LIMCH1Q9UPQ0 1083 aa19.48■□□□□ 0.71
CTSB-203ENST00000420692 RBM8AQ9Y5S9 174 aaKnown RBP19.48■□□□□ 0.71
CTSB-203ENST00000420692 FPGT-TNNI3KV9GXZ4 949 aa19.48■□□□□ 0.71
CTSB-203ENST00000420692 TJP1Q07157 1748 aa19.48■□□□□ 0.71
CTSB-203ENST00000420692 TCHHQ07283 1943 aa19.48■□□□□ 0.71
CTSB-203ENST00000420692 NCLP19338 710 aaKnown RBP19.48■□□□□ 0.71
CTSB-203ENST00000420692 DDX54Q8TDD1 881 aaKnown RBP19.48■□□□□ 0.71
CTSB-203ENST00000420692 TM6SF1Q9BZW5 370 aa19.48■□□□□ 0.71
CTSB-203ENST00000420692 LMBR1LQ6UX01 489 aa19.47■□□□□ 0.71
CTSB-203ENST00000420692 JAKMIP1Q96N16 626 aaKnown RBP19.47■□□□□ 0.71
CTSB-203ENST00000420692 MED23Q9ULK4 1368 aa19.47■□□□□ 0.71
CTSB-203ENST00000420692 ATP5JP18859 108 aa19.47■□□□□ 0.71
CTSB-203ENST00000420692 CREB3L3Q68CJ9 461 aa19.47■□□□□ 0.71
CTSB-203ENST00000420692 TAF6LQ9Y6J9 622 aa19.47■□□□□ 0.71
CTSB-203ENST00000420692 NDUFB9Q9Y6M9 179 aa19.47■□□□□ 0.71
CTSB-203ENST00000420692 TNS2Q63HR2 1409 aa19.46■□□□□ 0.71
CTSB-203ENST00000420692 TOGARAM1Q9Y4F4 1720 aa19.46■□□□□ 0.71
CTSB-203ENST00000420692 ZNF589Q86UQ0 364 aaPredicted RBP19.46■□□□□ 0.71
CTSB-203ENST00000420692 FSD1Q9BTV5 496 aa19.46■□□□□ 0.71
CTSB-203ENST00000420692 STRN4Q9NRL3 753 aa19.46■□□□□ 0.71
CTSB-203ENST00000420692 KDM4FA0A1W2PPD8 638 aa19.45■□□□□ 0.7
CTSB-203ENST00000420692 HIP1O00291 1037 aa19.45■□□□□ 0.7
CTSB-203ENST00000420692 DTNBO60941 627 aa19.45■□□□□ 0.7
CTSB-203ENST00000420692 CHGBP05060 677 aa19.45■□□□□ 0.7
CTSB-203ENST00000420692 ST3GAL1Q11201 340 aa19.45■□□□□ 0.7
CTSB-203ENST00000420692 VPS53Q5VIR6 699 aa19.45■□□□□ 0.7
CTSB-203ENST00000420692 TMEM63CQ9P1W3 806 aa19.45■□□□□ 0.7
CTSB-203ENST00000420692 DBNDD2Q9BQY9 259 aa19.45■□□□□ 0.7
CTSB-203ENST00000420692 JCADQ9P266 1359 aa19.45■□□□□ 0.7
CTSB-203ENST00000420692 SLC27A2O14975 620 aa19.44■□□□□ 0.7
CTSB-203ENST00000420692 ATG9AQ7Z3C6 839 aa19.44■□□□□ 0.7
CTSB-203ENST00000420692 PDRG1Q9NUG6 133 aa19.44■□□□□ 0.7
CTSB-203ENST00000420692 FOXD4L6Q3SYB3 417 aaPredicted RBP19.43■□□□□ 0.7
CTSB-203ENST00000420692 FOXD4L3Q6VB84 417 aaPredicted RBP19.43■□□□□ 0.7
CTSB-203ENST00000420692 ZBTB3Q9H5J0 574 aa19.43■□□□□ 0.7
CTSB-203ENST00000420692 WDR33Q9C0J8 1336 aaKnown RBP19.43■□□□□ 0.7
CTSB-203ENST00000420692 CWC25Q9NXE8 425 aaPredicted RBP19.43■□□□□ 0.7
CTSB-203ENST00000420692 CYP46A1Q9Y6A2 500 aa19.43■□□□□ 0.7
CTSB-203ENST00000420692 TAF5LO75529 589 aa19.42■□□□□ 0.7
CTSB-203ENST00000420692 SYT1P21579 422 aa19.41■□□□□ 0.7
CTSB-203ENST00000420692 GDPD2Q9HCC8 539 aa19.41■□□□□ 0.7
CTSB-203ENST00000420692 GADD45BO75293 160 aaPredicted RBP19.41■□□□□ 0.7
CTSB-203ENST00000420692 PRIM1P49642 420 aaKnown RBP19.41■□□□□ 0.7
CTSB-203ENST00000420692 ME3Q16798 604 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms