RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 SLC51AQ86UW1 340 aa18.49■□□□□ 0.55
SSB-204ENST00000417292 BEGAINQ9BUH8 593 aa18.49■□□□□ 0.55
SSB-204ENST00000417292 ABCC12Q96J65 1359 aa18.48■□□□□ 0.55
SSB-204ENST00000417292 RGL2O15211 777 aa18.48■□□□□ 0.55
SSB-204ENST00000417292 SNRPA1P09661 255 aaKnown RBP18.48■□□□□ 0.55
SSB-204ENST00000417292 LMOD1P29536 600 aaPredicted RBP18.48■□□□□ 0.55
SSB-204ENST00000417292 EIF6P56537 245 aaKnown RBP18.48■□□□□ 0.55
SSB-204ENST00000417292 KIF7Q2M1P5 1343 aa18.48■□□□□ 0.55
SSB-204ENST00000417292 AOC2O75106 756 aa18.47■□□□□ 0.55
SSB-204ENST00000417292 TLL2Q9Y6L7 1015 aa18.47■□□□□ 0.55
SSB-204ENST00000417292 TRPM7Q96QT4 1865 aa18.46■□□□□ 0.55
SSB-204ENST00000417292 GTF2E1P29083 439 aaPredicted RBP18.46■□□□□ 0.55
SSB-204ENST00000417292 PRKAR2BP31323 418 aa18.45■□□□□ 0.54
SSB-204ENST00000417292 USP50Q70EL3 339 aaPredicted RBP18.45■□□□□ 0.54
SSB-204ENST00000417292 NUTM1Q86Y26 1132 aa18.45■□□□□ 0.54
SSB-204ENST00000417292 MAP2K2P36507 400 aa18.44■□□□□ 0.54
SSB-204ENST00000417292 CC2D2BQ6DHV5 1058 aa18.44■□□□□ 0.54
SSB-204ENST00000417292 MCM10Q7L590 875 aa18.44■□□□□ 0.54
SSB-204ENST00000417292 LARGE2Q8N3Y3 721 aa18.44■□□□□ 0.54
SSB-204ENST00000417292 RSPH6AQ9H0K4 717 aa18.44■□□□□ 0.54
SSB-204ENST00000417292 PCDH10Q9P2E7 1040 aa18.44■□□□□ 0.54
SSB-204ENST00000417292 HOXA10P31260 410 aaPredicted RBP18.43■□□□□ 0.54
SSB-204ENST00000417292 SAPCD2Q86UD0 394 aa18.43■□□□□ 0.54
SSB-204ENST00000417292 MCOLN1Q9GZU1 580 aa18.43■□□□□ 0.54
SSB-204ENST00000417292 CNGB1Q14028 1251 aaPredicted RBP18.42■□□□□ 0.54
SSB-204ENST00000417292 DCTN1Q14203 1278 aa18.41■□□□□ 0.54
SSB-204ENST00000417292 RPGRQ92834 1020 aaKnown RBP18.41■□□□□ 0.54
SSB-204ENST00000417292 CFAP44Q96MT7 982 aa18.41■□□□□ 0.54
SSB-204ENST00000417292 NYXQ9GZU5 481 aa18.41■□□□□ 0.54
SSB-204ENST00000417292 CASP8AP2Q9UKL3 1982 aa18.41■□□□□ 0.54
SSB-204ENST00000417292 TCERG1O14776 1098 aaKnown RBP18.4■□□□□ 0.54
SSB-204ENST00000417292 CELF2O95319 508 aaKnown RBP18.4■□□□□ 0.54
SSB-204ENST00000417292 ADARB2Q9NS39 739 aaKnown RBP18.4■□□□□ 0.54
SSB-204ENST00000417292 GPRC5DQ9NZD1 345 aa18.4■□□□□ 0.54
SSB-204ENST00000417292 RIC1Q4ADV7 1423 aa18.4■□□□□ 0.54
SSB-204ENST00000417292 CA12O43570 354 aa18.39■□□□□ 0.53
SSB-204ENST00000417292 GRIPAP1Q4V328 841 aa18.39■□□□□ 0.53
SSB-204ENST00000417292 NIM1KQ8IY84 436 aa18.39■□□□□ 0.53
SSB-204ENST00000417292 NGEFQ8N5V2 710 aa18.39■□□□□ 0.53
SSB-204ENST00000417292 UBN2Q6ZU65 1347 aa18.39■□□□□ 0.53
SSB-204ENST00000417292 NUP98P52948 1817 aa18.38■□□□□ 0.53
SSB-204ENST00000417292 ERVV-1B6SEH8 477 aa18.38■□□□□ 0.53
SSB-204ENST00000417292 PPEF1O14829 653 aaPredicted RBP18.38■□□□□ 0.53
SSB-204ENST00000417292 BRPF1P55201 1214 aaPredicted RBP18.38■□□□□ 0.53
SSB-204ENST00000417292 C3orf67Q6ZVT6 689 aa18.38■□□□□ 0.53
SSB-204ENST00000417292 RTF1Q92541 710 aaKnown RBP18.38■□□□□ 0.53
SSB-204ENST00000417292 CRAMP1Q96RY5 1269 aa18.38■□□□□ 0.53
SSB-204ENST00000417292 GLIS2Q9BZE0 524 aaPredicted RBP18.38■□□□□ 0.53
SSB-204ENST00000417292 NPC1L1Q9UHC9 1359 aa18.38■□□□□ 0.53
SSB-204ENST00000417292 PPIP5K2O43314 1243 aa18.37■□□□□ 0.53
SSB-204ENST00000417292 GPTP24298 496 aa18.37■□□□□ 0.53
SSB-204ENST00000417292 CXCL9Q07325 125 aa18.37■□□□□ 0.53
SSB-204ENST00000417292 AOC3Q16853 763 aa18.37■□□□□ 0.53
SSB-204ENST00000417292 SUSD4Q5VX71 490 aa18.37■□□□□ 0.53
SSB-204ENST00000417292 TTLL7Q6ZT98 887 aa18.37■□□□□ 0.53
SSB-204ENST00000417292 HHIPL1Q96JK4 782 aa18.37■□□□□ 0.53
SSB-204ENST00000417292 MIS18AQ9NYP9 233 aa18.37■□□□□ 0.53
SSB-204ENST00000417292 MAP3K15Q6ZN16 1313 aa18.37■□□□□ 0.53
SSB-204ENST00000417292 LAMB4A4D0S4 1761 aa18.37■□□□□ 0.53
SSB-204ENST00000417292 DGKZQ13574 1117 aa18.36■□□□□ 0.53
SSB-204ENST00000417292 CIAPIN1Q6FI81 312 aa18.36■□□□□ 0.53
SSB-204ENST00000417292 RBM17Q96I25 401 aaKnown RBP18.36■□□□□ 0.53
SSB-204ENST00000417292 IBTKQ9P2D0 1353 aaPredicted RBP18.36■□□□□ 0.53
SSB-204ENST00000417292 PGAP2Q9UHJ9 254 aa18.36■□□□□ 0.53
SSB-204ENST00000417292 GMPSP49915 693 aaPredicted RBP18.35■□□□□ 0.53
SSB-204ENST00000417292 ZIC5Q96T25 663 aa18.35■□□□□ 0.53
SSB-204ENST00000417292 NTSR2O95665 410 aa18.34■□□□□ 0.53
SSB-204ENST00000417292 HIRAP54198 1017 aaPredicted RBP18.34■□□□□ 0.53
SSB-204ENST00000417292 TAF7Q15545 349 aaPredicted RBP18.34■□□□□ 0.53
SSB-204ENST00000417292 ZNF408Q9H9D4 720 aa18.34■□□□□ 0.53
SSB-204ENST00000417292 ZNRF3Q9ULT6 936 aa18.34■□□□□ 0.53
SSB-204ENST00000417292 ZNF34Q8IZ26 560 aa18.33■□□□□ 0.52
SSB-204ENST00000417292 ZBTB3Q9H5J0 574 aa18.33■□□□□ 0.52
SSB-204ENST00000417292 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.52
SSB-204ENST00000417292 ATP6V0A2Q9Y487 856 aa18.33■□□□□ 0.52
SSB-204ENST00000417292 PDE4DIPQ5VU43 2346 aa18.33■□□□□ 0.52
SSB-204ENST00000417292 HTATSF1O43719 755 aaKnown RBP18.32■□□□□ 0.52
SSB-204ENST00000417292 U2AF1L5P0DN76 240 aaPredicted RBP18.32■□□□□ 0.52
SSB-204ENST00000417292 U2AF1Q01081 240 aaKnown RBP eCLIP18.32■□□□□ 0.523e-12■□□□□ 10
SSB-204ENST00000417292 KIF6Q6ZMV9 814 aa18.32■□□□□ 0.52
SSB-204ENST00000417292 VPS33BQ9H267 617 aa18.32■□□□□ 0.52
SSB-204ENST00000417292 MYL6BP14649 208 aa18.31■□□□□ 0.52
SSB-204ENST00000417292 DLK2Q6UY11 383 aa18.31■□□□□ 0.52
SSB-204ENST00000417292 TRPM4Q8TD43 1214 aa18.31■□□□□ 0.52
SSB-204ENST00000417292 ZC3H15Q8WU90 426 aaKnown RBP18.31■□□□□ 0.52
SSB-204ENST00000417292 CFAP53Q96M91 514 aa18.31■□□□□ 0.52
SSB-204ENST00000417292 RTFDC1Q9BY42 306 aaPredicted RBP18.31■□□□□ 0.52
SSB-204ENST00000417292 SHTN1A0MZ66 631 aa18.3■□□□□ 0.52
SSB-204ENST00000417292 RAD17O75943 681 aa18.3■□□□□ 0.52
SSB-204ENST00000417292 NOGQ13253 232 aa18.3■□□□□ 0.52
SSB-204ENST00000417292 CDC37L1Q7L3B6 337 aa18.3■□□□□ 0.52
SSB-204ENST00000417292 NUDCQ9Y266 331 aa18.3■□□□□ 0.52
SSB-204ENST00000417292 ABCC4O15439 1325 aa18.29■□□□□ 0.52
SSB-204ENST00000417292 CDHR2Q9BYE9 1310 aa18.29■□□□□ 0.52
SSB-204ENST00000417292 NLRP3Q96P20 1036 aa18.29■□□□□ 0.52
SSB-204ENST00000417292 KDM3BQ7LBC6 1761 aa18.28■□□□□ 0.52
SSB-204ENST00000417292 EIF4A1P60842 406 aaKnown RBP18.28■□□□□ 0.52
SSB-204ENST00000417292 GIGYF2Q6Y7W6 1299 aaKnown RBP18.28■□□□□ 0.52
SSB-204ENST00000417292 SUPT20HQ8NEM7 779 aa18.28■□□□□ 0.52
SSB-204ENST00000417292 BCL2L13Q9BXK5 485 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms