RNA–Protein interactions for RNA: ENST00000417226.6

HMCES-203, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

TSL 1 (best) BASIC

Gene HMCES, Length 1,490 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-203ENST00000417226 COL11A2P13942 1736 aaPredicted RBP27.29■■□□□ 1.96
HMCES-203ENST00000417226 TNRC6CQ9HCJ0 1690 aaKnown RBP27.29■■□□□ 1.96
HMCES-203ENST00000417226 TRIM28Q13263 835 aaKnown RBP27.28■■□□□ 1.96
HMCES-203ENST00000417226 ERFEQ4G0M1 354 aa27.28■■□□□ 1.96
HMCES-203ENST00000417226 TRMT112Q9UI30 125 aaKnown RBP27.28■■□□□ 1.96
HMCES-203ENST00000417226 IGKV5-2P06315 115 aa27.27■■□□□ 1.96
HMCES-203ENST00000417226 TGFB2P61812 414 aa27.27■■□□□ 1.96
HMCES-203ENST00000417226 BRIP1Q9BX63 1249 aa27.27■■□□□ 1.96
HMCES-203ENST00000417226 UTRNP46939 3433 aa27.27■■□□□ 1.96
HMCES-203ENST00000417226 DLEC1Q9Y238 1755 aa27.26■■□□□ 1.96
HMCES-203ENST00000417226 BRCA1P38398 1863 aaKnown RBP27.26■■□□□ 1.95
HMCES-203ENST00000417226 A0A0G2JLW4 131 aa27.25■■□□□ 1.95
HMCES-203ENST00000417226 BCAR3O75815 825 aa27.25■■□□□ 1.95
HMCES-203ENST00000417226 BRPF1P55201 1214 aaPredicted RBP27.25■■□□□ 1.95
HMCES-203ENST00000417226 CWF19L2Q2TBE0 894 aaKnown RBP27.25■■□□□ 1.95
HMCES-203ENST00000417226 CCDC191Q8NCU4 936 aa27.25■■□□□ 1.95
HMCES-203ENST00000417226 CWC25Q9NXE8 425 aaPredicted RBP27.25■■□□□ 1.95
HMCES-203ENST00000417226 NOB1Q9ULX3 412 aaKnown RBP27.25■■□□□ 1.95
HMCES-203ENST00000417226 RNF123Q5XPI4 1314 aa27.25■■□□□ 1.95
HMCES-203ENST00000417226 KIF16BQ96L93 1317 aa27.25■■□□□ 1.95
HMCES-203ENST00000417226 DPEP1P16444 411 aa27.25■■□□□ 1.95
HMCES-203ENST00000417226 CHRNA5P30532 468 aa27.25■■□□□ 1.95
HMCES-203ENST00000417226 SLC4A10Q6U841 1118 aa27.25■■□□□ 1.95
HMCES-203ENST00000417226 SH3TC1Q8TE82 1336 aa27.24■■□□□ 1.95
HMCES-203ENST00000417226 NEURL1BA8MQ27 555 aa27.24■■□□□ 1.95
HMCES-203ENST00000417226 PDE6BP35913 854 aa27.24■■□□□ 1.95
HMCES-203ENST00000417226 SYNE4Q8N205 404 aa27.24■■□□□ 1.95
HMCES-203ENST00000417226 DDX60Q8IY21 1712 aaKnown RBP27.24■■□□□ 1.95
HMCES-203ENST00000417226 RTL5Q5HYW3 569 aaPredicted RBP27.23■■□□□ 1.95
HMCES-203ENST00000417226 C2CD5Q86YS7 1000 aa27.23■■□□□ 1.95
HMCES-203ENST00000417226 WWC3Q9ULE0 1092 aa27.23■■□□□ 1.95
HMCES-203ENST00000417226 LAMB2P55268 1798 aa27.23■■□□□ 1.95
HMCES-203ENST00000417226 LINS1Q8NG48 757 aa27.22■■□□□ 1.95
HMCES-203ENST00000417226 FAM89AQ96GI7 184 aa27.22■■□□□ 1.95
HMCES-203ENST00000417226 RIC1Q4ADV7 1423 aa27.22■■□□□ 1.95
HMCES-203ENST00000417226 BEND3Q5T5X7 828 aa27.21■■□□□ 1.95
HMCES-203ENST00000417226 H0YIN7 160 aa27.2■■□□□ 1.95
HMCES-203ENST00000417226 ZBTB38Q8NAP3 1195 aaPredicted RBP27.2■■□□□ 1.95
HMCES-203ENST00000417226 CACNA1SQ13698 1873 aa27.2■■□□□ 1.94
HMCES-203ENST00000417226 HCLS1P14317 486 aaPredicted RBP27.19■■□□□ 1.94
HMCES-203ENST00000417226 FRAT1Q92837 279 aaPredicted RBP27.19■■□□□ 1.94
HMCES-203ENST00000417226 KCNA3P22001 575 aa27.19■■□□□ 1.94
HMCES-203ENST00000417226 GCKRQ14397 625 aa27.19■■□□□ 1.94
HMCES-203ENST00000417226 PDZRN3Q9UPQ7 1066 aa27.19■■□□□ 1.94
HMCES-203ENST00000417226 PCCAP05165 728 aaPredicted RBP27.18■■□□□ 1.94
HMCES-203ENST00000417226 SLC10A5Q5PT55 438 aa27.18■■□□□ 1.94
HMCES-203ENST00000417226 PELP1Q8IZL8 1130 aaKnown RBP27.18■■□□□ 1.94
HMCES-203ENST00000417226 JARID2Q92833 1246 aaPredicted RBP27.18■■□□□ 1.94
HMCES-203ENST00000417226 API5Q9BZZ5 524 aaKnown RBP27.18■■□□□ 1.94
HMCES-203ENST00000417226 C3orf67Q6ZVT6 689 aa27.17■■□□□ 1.94
HMCES-203ENST00000417226 SRCIN1Q9C0H9 1055 aa27.17■■□□□ 1.94
HMCES-203ENST00000417226 KLRG2A4D1S0 409 aaPredicted RBP27.16■■□□□ 1.94
HMCES-203ENST00000417226 SRGNP10124 158 aa27.16■■□□□ 1.94
HMCES-203ENST00000417226 PIM2Q9P1W9 311 aa27.16■■□□□ 1.94
HMCES-203ENST00000417226 IRS4O14654 1257 aaPredicted RBP27.15■■□□□ 1.94
HMCES-203ENST00000417226 IPO8O15397 1037 aaKnown RBP27.15■■□□□ 1.94
HMCES-203ENST00000417226 ARHGAP45Q92619 1136 aa27.15■■□□□ 1.94
HMCES-203ENST00000417226 ZNF622Q969S3 477 aaKnown RBP eCLIP27.15■■□□□ 1.94
HMCES-203ENST00000417226 NLRP3Q96P20 1036 aa27.15■■□□□ 1.94
HMCES-203ENST00000417226 RCAN3Q9UKA8 241 aa27.15■■□□□ 1.94
HMCES-203ENST00000417226 MYH3P11055 1940 aa27.14■■□□□ 1.94
HMCES-203ENST00000417226 UBE3BQ7Z3V4 1068 aa27.14■■□□□ 1.94
HMCES-203ENST00000417226 ALDH1L1O75891 902 aa27.13■■□□□ 1.93
HMCES-203ENST00000417226 CRY2Q49AN0 593 aa27.13■■□□□ 1.93
HMCES-203ENST00000417226 ATF7IPQ6VMQ6 1270 aa27.13■■□□□ 1.93
HMCES-203ENST00000417226 MASTLQ96GX5 879 aa27.13■■□□□ 1.93
HMCES-203ENST00000417226 TRIM27P14373 513 aa27.13■■□□□ 1.93
HMCES-203ENST00000417226 GPR162Q16538 588 aa27.13■■□□□ 1.93
HMCES-203ENST00000417226 CDHR2Q9BYE9 1310 aa27.12■■□□□ 1.93
HMCES-203ENST00000417226 ARFGEF1Q9Y6D6 1849 aa27.12■■□□□ 1.93
HMCES-203ENST00000417226 NPR1P16066 1061 aa27.12■■□□□ 1.93
HMCES-203ENST00000417226 DALRD3Q5D0E6 543 aaKnown RBP27.12■■□□□ 1.93
HMCES-203ENST00000417226 ZKSCAN2Q63HK3 967 aa27.12■■□□□ 1.93
HMCES-203ENST00000417226 STYK1Q6J9G0 422 aa27.12■■□□□ 1.93
HMCES-203ENST00000417226 RPGRQ92834 1020 aaKnown RBP27.12■■□□□ 1.93
HMCES-203ENST00000417226 BCS1LQ9Y276 419 aa27.12■■□□□ 1.93
HMCES-203ENST00000417226 H7C1W4 665 aa27.11■■□□□ 1.93
HMCES-203ENST00000417226 HSP90B1P14625 803 aaKnown RBP27.11■■□□□ 1.93
HMCES-203ENST00000417226 YBX3P16989 372 aaKnown RBP eCLIP27.11■■□□□ 1.93
HMCES-203ENST00000417226 TNNQ9UQP3 1299 aa27.11■■□□□ 1.93
HMCES-203ENST00000417226 ABCC4O15439 1325 aa27.1■■□□□ 1.93
HMCES-203ENST00000417226 TTLL6Q8N841 843 aa27.1■■□□□ 1.93
HMCES-203ENST00000417226 C9orf78Q9NZ63 289 aaPredicted RBP27.1■■□□□ 1.93
HMCES-203ENST00000417226 SLX4Q8IY92 1834 aa27.1■■□□□ 1.93
HMCES-203ENST00000417226 GRM8O00222 908 aa27.09■■□□□ 1.93
HMCES-203ENST00000417226 CCT4P50991 539 aaKnown RBP27.09■■□□□ 1.93
HMCES-203ENST00000417226 CLUAP1Q96AJ1 413 aa27.09■■□□□ 1.93
HMCES-203ENST00000417226 DCAF8L1A6NGE4 600 aa27.08■■□□□ 1.93
HMCES-203ENST00000417226 CASP7P55210 303 aa27.08■■□□□ 1.93
HMCES-203ENST00000417226 CNKSR1Q969H4 720 aa27.08■■□□□ 1.93
HMCES-203ENST00000417226 TAF1P21675 1872 aa27.07■■□□□ 1.92
HMCES-203ENST00000417226 PDE8AO60658 829 aa27.07■■□□□ 1.92
HMCES-203ENST00000417226 RBM17Q96I25 401 aaKnown RBP27.06■■□□□ 1.92
HMCES-203ENST00000417226 PRPF40BQ6NWY9 871 aaKnown RBP27.06■■□□□ 1.92
HMCES-203ENST00000417226 HOXA10P31260 410 aaPredicted RBP27.05■■□□□ 1.92
HMCES-203ENST00000417226 CTSWP56202 376 aa27.05■■□□□ 1.92
HMCES-203ENST00000417226 SF3B3Q15393 1217 aaKnown RBP27.05■■□□□ 1.92
HMCES-203ENST00000417226 FTSJ3Q8IY81 847 aaKnown RBP27.05■■□□□ 1.92
HMCES-203ENST00000417226 NBPF7P0C2Y1 421 aaPredicted RBP27.04■■□□□ 1.92
HMCES-203ENST00000417226 ALDH1B1P30837 517 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms