RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 NUTM1Q86Y26 1132 aa20.44■□□□□ 0.86
DDX56-202ENST00000415758 DLG5Q8TDM6 1919 aa20.44■□□□□ 0.86
DDX56-202ENST00000415758 EIF4A1P60842 406 aaKnown RBP20.43■□□□□ 0.86
DDX56-202ENST00000415758 DEFB115Q30KQ5 88 aa20.43■□□□□ 0.86
DDX56-202ENST00000415758 MAP1SQ66K74 1059 aaPredicted RBP20.43■□□□□ 0.86
DDX56-202ENST00000415758 AIDAQ96BJ3 306 aa20.43■□□□□ 0.86
DDX56-202ENST00000415758 NGEFQ8N5V2 710 aa20.42■□□□□ 0.86
DDX56-202ENST00000415758 CRAMP1Q96RY5 1269 aa20.42■□□□□ 0.86
DDX56-202ENST00000415758 COL4A5P29400 1685 aa20.42■□□□□ 0.86
DDX56-202ENST00000415758 EIF6P56537 245 aaKnown RBP20.41■□□□□ 0.86
DDX56-202ENST00000415758 KIF6Q6ZMV9 814 aa20.41■□□□□ 0.86
DDX56-202ENST00000415758 TTLL7Q6ZT98 887 aa20.41■□□□□ 0.86
DDX56-202ENST00000415758 ZNF34Q8IZ26 560 aa20.41■□□□□ 0.86
DDX56-202ENST00000415758 PLEKHF1Q96S99 279 aa20.41■□□□□ 0.86
DDX56-202ENST00000415758 RRP7AQ9Y3A4 280 aaKnown RBP20.41■□□□□ 0.86
DDX56-202ENST00000415758 NEFMP07197 916 aa20.4■□□□□ 0.86
DDX56-202ENST00000415758 SUSD4Q5VX71 490 aa20.4■□□□□ 0.86
DDX56-202ENST00000415758 UBN2Q6ZU65 1347 aa20.4■□□□□ 0.86
DDX56-202ENST00000415758 RPGRQ92834 1020 aaKnown RBP20.4■□□□□ 0.86
DDX56-202ENST00000415758 GIGYF2Q6Y7W6 1299 aaKnown RBP20.39■□□□□ 0.85
DDX56-202ENST00000415758 LTBP1Q14766 1721 aa20.39■□□□□ 0.85
DDX56-202ENST00000415758 ERBB4Q15303 1308 aa20.38■□□□□ 0.85
DDX56-202ENST00000415758 WDR33Q9C0J8 1336 aaKnown RBP20.38■□□□□ 0.85
DDX56-202ENST00000415758 SCNN1DP51172 638 aa20.38■□□□□ 0.85
DDX56-202ENST00000415758 RBM17Q96I25 401 aaKnown RBP20.38■□□□□ 0.85
DDX56-202ENST00000415758 ZBTB3Q9H5J0 574 aa20.38■□□□□ 0.85
DDX56-202ENST00000415758 DDX21Q9NR30 783 aaKnown RBP eCLIP20.38■□□□□ 0.85
DDX56-202ENST00000415758 NTSR2O95665 410 aa20.37■□□□□ 0.85
DDX56-202ENST00000415758 MYL6BP14649 208 aa20.37■□□□□ 0.85
DDX56-202ENST00000415758 GPTP24298 496 aa20.37■□□□□ 0.85
DDX56-202ENST00000415758 LMOD1P29536 600 aaPredicted RBP20.37■□□□□ 0.85
DDX56-202ENST00000415758 LBX1P52954 281 aa20.37■□□□□ 0.85
DDX56-202ENST00000415758 MAP2K1Q02750 393 aaPredicted RBP20.37■□□□□ 0.85
DDX56-202ENST00000415758 NFE2L2Q16236 605 aa20.37■□□□□ 0.85
DDX56-202ENST00000415758 LARGE2Q8N3Y3 721 aa20.37■□□□□ 0.85
DDX56-202ENST00000415758 VPS33BQ9H267 617 aa20.37■□□□□ 0.85
DDX56-202ENST00000415758 GJA3Q9Y6H8 435 aa20.37■□□□□ 0.85
DDX56-202ENST00000415758 EPS15P42566 896 aa20.36■□□□□ 0.85
DDX56-202ENST00000415758 PARP10Q53GL7 1025 aa20.36■□□□□ 0.85
DDX56-202ENST00000415758 SLC10A5Q5PT55 438 aa20.36■□□□□ 0.85
DDX56-202ENST00000415758 USP50Q70EL3 339 aaPredicted RBP20.36■□□□□ 0.85
DDX56-202ENST00000415758 PPP1R42Q7Z4L9 355 aa20.36■□□□□ 0.85
DDX56-202ENST00000415758 PPEF1O14829 653 aaPredicted RBP20.35■□□□□ 0.85
DDX56-202ENST00000415758 ABT1Q9ULW3 272 aaKnown RBP20.35■□□□□ 0.85
DDX56-202ENST00000415758 HSPA8P11142 646 aaKnown RBP20.34■□□□□ 0.85
DDX56-202ENST00000415758 C3orf67Q6ZVT6 689 aa20.34■□□□□ 0.85
DDX56-202ENST00000415758 LRP10Q7Z4F1 713 aa20.34■□□□□ 0.85
DDX56-202ENST00000415758 NLRP3Q96P20 1036 aa20.34■□□□□ 0.85
DDX56-202ENST00000415758 THUMPD2Q9BTF0 503 aaKnown RBP20.34■□□□□ 0.85
DDX56-202ENST00000415758 PNNQ9H307 717 aaKnown RBP20.34■□□□□ 0.85
DDX56-202ENST00000415758 ATP6V0A2Q9Y487 856 aa20.33■□□□□ 0.85
DDX56-202ENST00000415758 PDIA6Q15084 440 aa20.32■□□□□ 0.84
DDX56-202ENST00000415758 CST9Q5W186 159 aa20.32■□□□□ 0.84
DDX56-202ENST00000415758 SLC51AQ86UW1 340 aa20.32■□□□□ 0.84
DDX56-202ENST00000415758 NIM1KQ8IY84 436 aa20.32■□□□□ 0.84
DDX56-202ENST00000415758 TRPM7Q96QT4 1865 aa20.32■□□□□ 0.84
DDX56-202ENST00000415758 THSD7BQ9C0I4 1608 aa20.31■□□□□ 0.84
DDX56-202ENST00000415758 ECE1P42892 770 aa20.31■□□□□ 0.84
DDX56-202ENST00000415758 RTFDC1Q9BY42 306 aaPredicted RBP20.31■□□□□ 0.84
DDX56-202ENST00000415758 TMX4Q9H1E5 349 aaPredicted RBP20.31■□□□□ 0.84
DDX56-202ENST00000415758 TCERG1O14776 1098 aaKnown RBP20.3■□□□□ 0.84
DDX56-202ENST00000415758 PPIP5K2O43314 1243 aa20.3■□□□□ 0.84
DDX56-202ENST00000415758 FMR1Q06787 632 aaKnown RBP eCLIP20.3■□□□□ 0.84
DDX56-202ENST00000415758 CAPNS2Q96L46 248 aa20.3■□□□□ 0.84
DDX56-202ENST00000415758 UTP14AQ9BVJ6 771 aaKnown RBP20.3■□□□□ 0.84
DDX56-202ENST00000415758 BABAM1Q9NWV8 329 aa20.3■□□□□ 0.84
DDX56-202ENST00000415758 GPRC5DQ9NZD1 345 aa20.3■□□□□ 0.84
DDX56-202ENST00000415758 BBOX1O75936 387 aa20.29■□□□□ 0.84
DDX56-202ENST00000415758 AOC3Q16853 763 aa20.29■□□□□ 0.84
DDX56-202ENST00000415758 SUPT20HQ8NEM7 779 aa20.29■□□□□ 0.84
DDX56-202ENST00000415758 ADARB2Q9NS39 739 aaKnown RBP20.29■□□□□ 0.84
DDX56-202ENST00000415758 ZNRF3Q9ULT6 936 aa20.29■□□□□ 0.84
DDX56-202ENST00000415758 TLL2Q9Y6L7 1015 aa20.29■□□□□ 0.84
DDX56-202ENST00000415758 MAPK8IP3Q9UPT6 1336 aa20.28■□□□□ 0.84
DDX56-202ENST00000415758 CXCL9Q07325 125 aa20.28■□□□□ 0.84
DDX56-202ENST00000415758 SP8Q8IXZ3 490 aa20.28■□□□□ 0.84
DDX56-202ENST00000415758 GPR101Q96P66 508 aaPredicted RBP20.28■□□□□ 0.84
DDX56-202ENST00000415758 PGAP2Q9UHJ9 254 aa20.28■□□□□ 0.84
DDX56-202ENST00000415758 TSPYL4Q9UJ04 414 aa20.28■□□□□ 0.84
DDX56-202ENST00000415758 ABCC4O15439 1325 aa20.27■□□□□ 0.84
DDX56-202ENST00000415758 TRAF5O00463 557 aa20.27■□□□□ 0.84
DDX56-202ENST00000415758 ABHD8Q96I13 439 aa20.27■□□□□ 0.84
DDX56-202ENST00000415758 ANKRD36CQ5JPF3 1778 aa20.26■□□□□ 0.83
DDX56-202ENST00000415758 MAP2K2P36507 400 aa20.26■□□□□ 0.83
DDX56-202ENST00000415758 CYP4F22Q6NT55 531 aa20.26■□□□□ 0.83
DDX56-202ENST00000415758 CDHR2Q9BYE9 1310 aa20.26■□□□□ 0.83
DDX56-202ENST00000415758 EIF2S2P20042 333 aaKnown RBP20.25■□□□□ 0.83
DDX56-202ENST00000415758 KIAA2012Q0VF49 1180 aa20.25■□□□□ 0.83
DDX56-202ENST00000415758 PROSER3Q2NL68 480 aa20.25■□□□□ 0.83
DDX56-202ENST00000415758 HSP90AB3PQ58FF7 597 aa20.25■□□□□ 0.83
DDX56-202ENST00000415758 BEGAINQ9BUH8 593 aa20.25■□□□□ 0.83
DDX56-202ENST00000415758 LAMB2P55268 1798 aa20.24■□□□□ 0.83
DDX56-202ENST00000415758 DPP8Q6V1X1 898 aaPredicted RBP20.24■□□□□ 0.83
DDX56-202ENST00000415758 SAPCD2Q86UD0 394 aa20.24■□□□□ 0.83
DDX56-202ENST00000415758 NLRP10Q86W26 655 aa20.24■□□□□ 0.83
DDX56-202ENST00000415758 MPNDQ8N594 471 aa20.24■□□□□ 0.83
DDX56-202ENST00000415758 ZC3H15Q8WU90 426 aaKnown RBP20.24■□□□□ 0.83
DDX56-202ENST00000415758 HHIPL1Q96JK4 782 aa20.24■□□□□ 0.83
DDX56-202ENST00000415758 GMPSP49915 693 aaPredicted RBP20.23■□□□□ 0.83
DDX56-202ENST00000415758 RIPK4P57078 832 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 516 ms