RNA–Protein interactions for RNA: ENST00000415068.1

ZNF3-206, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-206ENST00000415068 HSP90B1P14625 803 aaKnown RBP16.53■□□□□ 0.24
ZNF3-206ENST00000415068 FAM182BQ5T319 152 aa16.53■□□□□ 0.24
ZNF3-206ENST00000415068 UBE3BQ7Z3V4 1068 aa16.53■□□□□ 0.24
ZNF3-206ENST00000415068 PLEKHM2Q8IWE5 1019 aa16.53■□□□□ 0.24
ZNF3-206ENST00000415068 LNPKQ9C0E8 428 aa16.53■□□□□ 0.24
ZNF3-206ENST00000415068 ZBTB47Q9UFB7 747 aaPredicted RBP16.53■□□□□ 0.24
ZNF3-206ENST00000415068 ZNF652Q9Y2D9 606 aa16.53■□□□□ 0.24
ZNF3-206ENST00000415068 NUP98P52948 1817 aa16.52■□□□□ 0.24
ZNF3-206ENST00000415068 RFX5P48382 616 aaPredicted RBP16.52■□□□□ 0.24
ZNF3-206ENST00000415068 RGS3P49796 1198 aa16.52■□□□□ 0.24
ZNF3-206ENST00000415068 BMP2KLQ5H9B9 411 aa16.52■□□□□ 0.24
ZNF3-206ENST00000415068 EPHA10Q5JZY3 1008 aa16.52■□□□□ 0.24
ZNF3-206ENST00000415068 NARFQ9UHQ1 456 aa16.52■□□□□ 0.24
ZNF3-206ENST00000415068 TBC1D2BQ9UPU7 963 aa16.52■□□□□ 0.24
ZNF3-206ENST00000415068 AFDNP55196 1824 aaKnown RBP16.52■□□□□ 0.23
ZNF3-206ENST00000415068 SALL3Q9BXA9 1300 aa16.51■□□□□ 0.23
ZNF3-206ENST00000415068 SURF6O75683 361 aaKnown RBP16.51■□□□□ 0.23
ZNF3-206ENST00000415068 TAF1LQ8IZX4 1826 aa16.5■□□□□ 0.23
ZNF3-206ENST00000415068 POTEAQ6S8J7 498 aa16.5■□□□□ 0.23
ZNF3-206ENST00000415068 SKAP1Q86WV1 359 aa16.5■□□□□ 0.23
ZNF3-206ENST00000415068 RHPN1Q8TCX5 695 aa16.5■□□□□ 0.23
ZNF3-206ENST00000415068 RTCBQ9Y3I0 505 aaKnown RBP16.5■□□□□ 0.23
ZNF3-206ENST00000415068 AOX1Q06278 1338 aa16.49■□□□□ 0.23
ZNF3-206ENST00000415068 ANKRD36CQ5JPF3 1778 aa16.49■□□□□ 0.23
ZNF3-206ENST00000415068 PTPN12Q05209 780 aaKnown RBP16.49■□□□□ 0.23
ZNF3-206ENST00000415068 SLC10A5Q5PT55 438 aa16.49■□□□□ 0.23
ZNF3-206ENST00000415068 PROM2Q8N271 834 aa16.49■□□□□ 0.23
ZNF3-206ENST00000415068 LRRC4BQ9NT99 713 aa16.49■□□□□ 0.23
ZNF3-206ENST00000415068 EXOC6BQ9Y2D4 811 aa16.49■□□□□ 0.23
ZNF3-206ENST00000415068 USP42Q9H9J4 1324 aaKnown RBP16.48■□□□□ 0.23
ZNF3-206ENST00000415068 EIF5BO60841 1220 aaKnown RBP16.48■□□□□ 0.23
ZNF3-206ENST00000415068 TRIM37O94972 964 aa16.48■□□□□ 0.23
ZNF3-206ENST00000415068 G3BP1Q13283 466 aaKnown RBP eCLIP16.48■□□□□ 0.23
ZNF3-206ENST00000415068 C8orf34Q49A92 452 aa16.48■□□□□ 0.23
ZNF3-206ENST00000415068 LMBR1LQ6UX01 489 aa16.48■□□□□ 0.23
ZNF3-206ENST00000415068 CIAO1O76071 339 aa16.47■□□□□ 0.23
ZNF3-206ENST00000415068 GPR108Q9NPR9 543 aa16.47■□□□□ 0.23
ZNF3-206ENST00000415068 PDE8AO60658 829 aa16.46■□□□□ 0.23
ZNF3-206ENST00000415068 PDE1AP54750 535 aa16.46■□□□□ 0.23
ZNF3-206ENST00000415068 TRAPPC3LQ5T215 181 aa16.46■□□□□ 0.23
ZNF3-206ENST00000415068 C16orf71Q8IYS4 520 aaPredicted RBP16.46■□□□□ 0.23
ZNF3-206ENST00000415068 ARHGEF1Q92888 912 aaKnown RBP16.46■□□□□ 0.23
ZNF3-206ENST00000415068 UTP14AQ9BVJ6 771 aaKnown RBP16.46■□□□□ 0.23
ZNF3-206ENST00000415068 TRMT112Q9UI30 125 aaKnown RBP16.46■□□□□ 0.23
ZNF3-206ENST00000415068 ZNF330Q9Y3S2 320 aaPredicted RBP16.46■□□□□ 0.23
ZNF3-206ENST00000415068 UBN2Q6ZU65 1347 aa16.45■□□□□ 0.22
ZNF3-206ENST00000415068 SASH1O94885 1247 aa16.45■□□□□ 0.22
ZNF3-206ENST00000415068 SSFA2P28290 1259 aa16.45■□□□□ 0.22
ZNF3-206ENST00000415068 TXNRD1Q16881 649 aa16.45■□□□□ 0.22
ZNF3-206ENST00000415068 SUSD4Q5VX71 490 aa16.45■□□□□ 0.22
ZNF3-206ENST00000415068 TTLL11Q8NHH1 800 aa16.45■□□□□ 0.22
ZNF3-206ENST00000415068 FAM89AQ96GI7 184 aa16.45■□□□□ 0.22
ZNF3-206ENST00000415068 ARXQ96QS3 562 aa16.45■□□□□ 0.22
ZNF3-206ENST00000415068 BCL2L12Q9HB09 334 aa16.45■□□□□ 0.22
ZNF3-206ENST00000415068 RBM19Q9Y4C8 960 aaKnown RBP16.45■□□□□ 0.22
ZNF3-206ENST00000415068 SH3TC1Q8TE82 1336 aa16.45■□□□□ 0.22
ZNF3-206ENST00000415068 RTL9Q8NET4 1388 aa16.44■□□□□ 0.22
ZNF3-206ENST00000415068 TTC22Q5TAA0 569 aa16.44■□□□□ 0.22
ZNF3-206ENST00000415068 TICAM2Q86XR7 235 aa16.44■□□□□ 0.22
ZNF3-206ENST00000415068 CLASRPQ8N2M8 674 aaKnown RBP16.44■□□□□ 0.22
ZNF3-206ENST00000415068 C4BP0C0L5 1744 aa16.44■□□□□ 0.22
ZNF3-206ENST00000415068 TTC41PQ6P2S7 1318 aa16.44■□□□□ 0.22
ZNF3-206ENST00000415068 IRS4O14654 1257 aaPredicted RBP16.43■□□□□ 0.22
ZNF3-206ENST00000415068 GNPATO15228 680 aa16.43■□□□□ 0.22
ZNF3-206ENST00000415068 SMARCA5O60264 1052 aaPredicted RBP16.43■□□□□ 0.22
ZNF3-206ENST00000415068 ZPR1O75312 459 aa16.43■□□□□ 0.22
ZNF3-206ENST00000415068 NTSR2O95665 410 aa16.43■□□□□ 0.22
ZNF3-206ENST00000415068 BCORQ6W2J9 1755 aa16.43■□□□□ 0.22
ZNF3-206ENST00000415068 GPTP24298 496 aa16.42■□□□□ 0.22
ZNF3-206ENST00000415068 IL15P40933 162 aaPredicted RBP16.42■□□□□ 0.22
ZNF3-206ENST00000415068 KCNQ4P56696 695 aa16.42■□□□□ 0.22
ZNF3-206ENST00000415068 FLAD1Q8NFF5 587 aa16.42■□□□□ 0.22
ZNF3-206ENST00000415068 JARID2Q92833 1246 aaPredicted RBP16.42■□□□□ 0.22
ZNF3-206ENST00000415068 NYXQ9GZU5 481 aa16.42■□□□□ 0.22
ZNF3-206ENST00000415068 NIP7Q9Y221 180 aaKnown RBP eCLIP16.42■□□□□ 0.22
ZNF3-206ENST00000415068 RGPD3A6NKT7 1758 aaPredicted RBP16.41■□□□□ 0.22
ZNF3-206ENST00000415068 RGPD4Q7Z3J3 1758 aa16.41■□□□□ 0.22
ZNF3-206ENST00000415068 EYA2O00167 538 aa16.41■□□□□ 0.22
ZNF3-206ENST00000415068 MX1P20591 662 aa16.41■□□□□ 0.22
ZNF3-206ENST00000415068 RFC4P35249 363 aa16.41■□□□□ 0.22
ZNF3-206ENST00000415068 CTSWP56202 376 aa16.41■□□□□ 0.22
ZNF3-206ENST00000415068 SF3B3Q15393 1217 aaKnown RBP16.41■□□□□ 0.22
ZNF3-206ENST00000415068 CCDC57Q2TAC2 916 aa16.41■□□□□ 0.22
ZNF3-206ENST00000415068 ATG9AQ7Z3C6 839 aa16.41■□□□□ 0.22
ZNF3-206ENST00000415068 PA2G4Q9UQ80 394 aaKnown RBP16.41■□□□□ 0.22
ZNF3-206ENST00000415068 APBA3O96018 575 aa16.4■□□□□ 0.22
ZNF3-206ENST00000415068 IFIT5Q13325 482 aaKnown RBP16.4■□□□□ 0.22
ZNF3-206ENST00000415068 AKT1S1Q96B36 256 aa16.4■□□□□ 0.22
ZNF3-206ENST00000415068 SETDB2Q96T68 719 aa16.4■□□□□ 0.22
ZNF3-206ENST00000415068 TM4SF1P30408 202 aa16.39■□□□□ 0.21
ZNF3-206ENST00000415068 USPL1Q5W0Q7 1092 aa16.39■□□□□ 0.21
ZNF3-206ENST00000415068 TPTE2Q6XPS3 522 aa16.39■□□□□ 0.21
ZNF3-206ENST00000415068 SYNE4Q8N205 404 aa16.39■□□□□ 0.21
ZNF3-206ENST00000415068 RIPOR2Q9Y4F9 1068 aa16.39■□□□□ 0.21
ZNF3-206ENST00000415068 OS9Q13438 667 aaPredicted RBP16.38■□□□□ 0.21
ZNF3-206ENST00000415068 TBC1D9BQ66K14 1250 aa16.38■□□□□ 0.21
ZNF3-206ENST00000415068 OTUD7AQ8TE49 926 aaPredicted RBP16.38■□□□□ 0.21
ZNF3-206ENST00000415068 EAF2Q96CJ1 260 aaPredicted RBP16.38■□□□□ 0.21
ZNF3-206ENST00000415068 UBR3Q6ZT12 1888 aa16.37■□□□□ 0.21
ZNF3-206ENST00000415068 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms