RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 DDNO94850 711 aaPredicted RBP20.3■□□□□ 0.84
ACTB-202ENST00000414620 CRY2Q49AN0 593 aa20.3■□□□□ 0.84
ACTB-202ENST00000414620 COPS6Q7L5N1 327 aa20.3■□□□□ 0.84
ACTB-202ENST00000414620 XAGE3Q8WTP9 111 aa20.3■□□□□ 0.84
ACTB-202ENST00000414620 C3orf67Q6ZVT6 689 aa20.29■□□□□ 0.84
ACTB-202ENST00000414620 PPP1R42Q7Z4L9 355 aa20.29■□□□□ 0.84
ACTB-202ENST00000414620 SLC51AQ86UW1 340 aa20.29■□□□□ 0.84
ACTB-202ENST00000414620 DDX60Q8IY21 1712 aaKnown RBP20.28■□□□□ 0.84
ACTB-202ENST00000414620 PARP10Q53GL7 1025 aa20.28■□□□□ 0.84
ACTB-202ENST00000414620 ZNF428Q96B54 188 aa20.28■□□□□ 0.84
ACTB-202ENST00000414620 CHPF2Q9P2E5 772 aa20.28■□□□□ 0.84
ACTB-202ENST00000414620 SNED1Q8TER0 1413 aa20.27■□□□□ 0.84
ACTB-202ENST00000414620 TCERG1O14776 1098 aaKnown RBP20.27■□□□□ 0.84
ACTB-202ENST00000414620 HDGFL1Q5TGJ6 251 aa20.27■□□□□ 0.84
ACTB-202ENST00000414620 RTKN2Q8IZC4 609 aa20.27■□□□□ 0.84
ACTB-202ENST00000414620 UTP14AQ9BVJ6 771 aaKnown RBP20.27■□□□□ 0.84
ACTB-202ENST00000414620 DDX21Q9NR30 783 aaKnown RBP eCLIP20.27■□□□□ 0.84
ACTB-202ENST00000414620 ZNF541Q9H0D2 1346 aa20.27■□□□□ 0.83
ACTB-202ENST00000414620 APAF1O14727 1248 aa20.26■□□□□ 0.83
ACTB-202ENST00000414620 SYNE4Q8N205 404 aa20.26■□□□□ 0.83
ACTB-202ENST00000414620 DNAJC5GQ8N7S2 189 aa20.26■□□□□ 0.83
ACTB-202ENST00000414620 IARSP41252 1262 aaKnown RBP20.25■□□□□ 0.83
ACTB-202ENST00000414620 RBM17Q96I25 401 aaKnown RBP20.25■□□□□ 0.83
ACTB-202ENST00000414620 MBIPQ9NS73 344 aa20.25■□□□□ 0.83
ACTB-202ENST00000414620 COL4A5P29400 1685 aa20.25■□□□□ 0.83
ACTB-202ENST00000414620 PPEF1O14829 653 aaPredicted RBP20.24■□□□□ 0.83
ACTB-202ENST00000414620 HSP90AB3PQ58FF7 597 aa20.24■□□□□ 0.83
ACTB-202ENST00000414620 CFAP44Q96MT7 982 aa20.24■□□□□ 0.83
ACTB-202ENST00000414620 NLRP3Q96P20 1036 aa20.24■□□□□ 0.83
ACTB-202ENST00000414620 POTEIP0CG38 1075 aa20.23■□□□□ 0.83
ACTB-202ENST00000414620 POTEJP0CG39 1038 aa20.23■□□□□ 0.83
ACTB-202ENST00000414620 HOXA10P31260 410 aaPredicted RBP20.23■□□□□ 0.83
ACTB-202ENST00000414620 DUSP27Q5VZP5 1158 aa20.23■□□□□ 0.83
ACTB-202ENST00000414620 NLRP10Q86W26 655 aa20.23■□□□□ 0.83
ACTB-202ENST00000414620 TCIRG1Q13488 830 aa20.22■□□□□ 0.83
ACTB-202ENST00000414620 CCDC184Q52MB2 194 aa20.22■□□□□ 0.83
ACTB-202ENST00000414620 CRAMP1Q96RY5 1269 aa20.22■□□□□ 0.83
ACTB-202ENST00000414620 HOXB7P09629 217 aa20.21■□□□□ 0.83
ACTB-202ENST00000414620 HCLS1P14317 486 aaPredicted RBP20.21■□□□□ 0.83
ACTB-202ENST00000414620 KLRG1Q96E93 195 aa20.21■□□□□ 0.83
ACTB-202ENST00000414620 PSMD1Q99460 953 aa20.21■□□□□ 0.83
ACTB-202ENST00000414620 ABCC4O15439 1325 aa20.21■□□□□ 0.83
ACTB-202ENST00000414620 SLC10A5Q5PT55 438 aa20.2■□□□□ 0.82
ACTB-202ENST00000414620 CC2D2BQ6DHV5 1058 aa20.2■□□□□ 0.82
ACTB-202ENST00000414620 DBF4Q9UBU7 674 aaPredicted RBP20.2■□□□□ 0.82
ACTB-202ENST00000414620 TRMT112Q9UI30 125 aaKnown RBP20.2■□□□□ 0.82
ACTB-202ENST00000414620 LTBP1Q14766 1721 aa20.19■□□□□ 0.82
ACTB-202ENST00000414620 IQCA1LA6NCM1 817 aa20.19■□□□□ 0.82
ACTB-202ENST00000414620 ELL2O00472 640 aaPredicted RBP20.19■□□□□ 0.82
ACTB-202ENST00000414620 ZNF853P0CG23 659 aa20.19■□□□□ 0.82
ACTB-202ENST00000414620 PLBD2Q8NHP8 589 aa20.19■□□□□ 0.82
ACTB-202ENST00000414620 L3MBTL3Q96JM7 780 aaPredicted RBP20.19■□□□□ 0.82
ACTB-202ENST00000414620 RNF123Q5XPI4 1314 aa20.19■□□□□ 0.82
ACTB-202ENST00000414620 ADAMTSL1Q8N6G6 1762 aa20.18■□□□□ 0.82
ACTB-202ENST00000414620 ATP5J2-PTCD1G3V325 749 aa20.18■□□□□ 0.82
ACTB-202ENST00000414620 FZD9O00144 591 aa20.18■□□□□ 0.82
ACTB-202ENST00000414620 CHADLQ6NUI6 762 aa20.18■□□□□ 0.82
ACTB-202ENST00000414620 JDP2Q8WYK2 163 aa20.18■□□□□ 0.82
ACTB-202ENST00000414620 TAF1DQ9H5J8 278 aaPredicted RBP20.18■□□□□ 0.82
ACTB-202ENST00000414620 IFT57Q9NWB7 429 aa20.18■□□□□ 0.82
ACTB-202ENST00000414620 SH3TC1Q8TE82 1336 aa20.18■□□□□ 0.82
ACTB-202ENST00000414620 GNAI1P63096 354 aa20.17■□□□□ 0.82
ACTB-202ENST00000414620 EAPPQ56P03 285 aaPredicted RBP20.17■□□□□ 0.82
ACTB-202ENST00000414620 ANKRD13DQ6ZTN6 518 aa20.17■□□□□ 0.82
ACTB-202ENST00000414620 LARGE2Q8N3Y3 721 aa20.17■□□□□ 0.82
ACTB-202ENST00000414620 LRRC37AA6NMS7 1700 aa20.16■□□□□ 0.82
ACTB-202ENST00000414620 HYPKQ9NX55 129 aa20.16■□□□□ 0.82
ACTB-202ENST00000414620 GJA3Q9Y6H8 435 aa20.16■□□□□ 0.82
ACTB-202ENST00000414620 COL4A1P02462 1669 aa20.16■□□□□ 0.82
ACTB-202ENST00000414620 EIF6P56537 245 aaKnown RBP20.15■□□□□ 0.82
ACTB-202ENST00000414620 CALD1Q05682 793 aaKnown RBP20.15■□□□□ 0.82
ACTB-202ENST00000414620 ISCA1Q9BUE6 129 aa20.15■□□□□ 0.82
ACTB-202ENST00000414620 TMX4Q9H1E5 349 aaPredicted RBP20.15■□□□□ 0.82
ACTB-202ENST00000414620 HACL1Q9UJ83 578 aa20.15■□□□□ 0.82
ACTB-202ENST00000414620 ATP6V0A2Q9Y487 856 aa20.15■□□□□ 0.82
ACTB-202ENST00000414620 PPIP5K2O43314 1243 aa20.14■□□□□ 0.81
ACTB-202ENST00000414620 EPHX2P34913 555 aa20.14■□□□□ 0.81
ACTB-202ENST00000414620 ZEB1P37275 1124 aaPredicted RBP20.14■□□□□ 0.81
ACTB-202ENST00000414620 AOC3Q16853 763 aa20.14■□□□□ 0.81
ACTB-202ENST00000414620 RTL5Q5HYW3 569 aaPredicted RBP20.14■□□□□ 0.81
ACTB-202ENST00000414620 LDHDQ86WU2 507 aa20.14■□□□□ 0.81
ACTB-202ENST00000414620 PHAXQ9H814 394 aaKnown RBP20.14■□□□□ 0.81
ACTB-202ENST00000414620 GRIPAP1Q4V328 841 aa20.13■□□□□ 0.81
ACTB-202ENST00000414620 DDX46Q7L014 1031 aaKnown RBP20.13■□□□□ 0.81
ACTB-202ENST00000414620 RIC3Q7Z5B4 369 aa20.13■□□□□ 0.81
ACTB-202ENST00000414620 NIM1KQ8IY84 436 aa20.13■□□□□ 0.81
ACTB-202ENST00000414620 GPC2Q8N158 579 aa20.13■□□□□ 0.81
ACTB-202ENST00000414620 C8orf58Q8NAV2 365 aa20.13■□□□□ 0.81
ACTB-202ENST00000414620 FAM89AQ96GI7 184 aa20.13■□□□□ 0.81
ACTB-202ENST00000414620 CLEC11AQ9Y240 323 aa20.13■□□□□ 0.81
ACTB-202ENST00000414620 GOLGA2Q08379 1002 aa20.12■□□□□ 0.81
ACTB-202ENST00000414620 GRAPQ13588 217 aa20.12■□□□□ 0.81
ACTB-202ENST00000414620 GRAPLQ8TC17 118 aaPredicted RBP20.12■□□□□ 0.81
ACTB-202ENST00000414620 DUOX1Q9NRD9 1551 aa20.12■□□□□ 0.81
ACTB-202ENST00000414620 JMYQ8N9B5 988 aa20.11■□□□□ 0.81
ACTB-202ENST00000414620 TSR2Q969E8 191 aaKnown RBP20.11■□□□□ 0.81
ACTB-202ENST00000414620 SPEF2Q9C093 1822 aa20.11■□□□□ 0.81
ACTB-202ENST00000414620 DPP8Q6V1X1 898 aaPredicted RBP20.1■□□□□ 0.81
ACTB-202ENST00000414620 SP8Q8IXZ3 490 aa20.1■□□□□ 0.81
ACTB-202ENST00000414620 MYD88Q99836 296 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms