RNA–Protein interactions for RNA: ENST00000412413.1

AC004009.1-201, humanhuman

TSL 5 BASIC

Gene AC004009.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.1-201ENST00000412413 POTECB2RU33 542 aa10.91□□□□□ -0.66
AC004009.1-201ENST00000412413 SRGNP10124 158 aa10.91□□□□□ -0.66
AC004009.1-201ENST00000412413 GTF2E1P29083 439 aaPredicted RBP10.91□□□□□ -0.66
AC004009.1-201ENST00000412413 MASTLQ96GX5 879 aa10.91□□□□□ -0.66
AC004009.1-201ENST00000412413 NIP7Q9Y221 180 aaKnown RBP eCLIP10.91□□□□□ -0.66
AC004009.1-201ENST00000412413 CEMIPQ8WUJ3 1361 aa10.9□□□□□ -0.66
AC004009.1-201ENST00000412413 BRCA1P38398 1863 aaKnown RBP10.9□□□□□ -0.66
AC004009.1-201ENST00000412413 NEFMP07197 916 aa10.9□□□□□ -0.66
AC004009.1-201ENST00000412413 MKRN3Q13064 507 aaKnown RBP10.9□□□□□ -0.66
AC004009.1-201ENST00000412413 JMYQ8N9B5 988 aa10.9□□□□□ -0.66
AC004009.1-201ENST00000412413 BBXQ8WY36 941 aaPredicted RBP10.9□□□□□ -0.66
AC004009.1-201ENST00000412413 ARFGEF1Q9Y6D6 1849 aa10.9□□□□□ -0.66
AC004009.1-201ENST00000412413 NBPF26B4DH59 902 aa10.89□□□□□ -0.67
AC004009.1-201ENST00000412413 POTEIP0CG38 1075 aa10.89□□□□□ -0.67
AC004009.1-201ENST00000412413 POTEJP0CG39 1038 aa10.89□□□□□ -0.67
AC004009.1-201ENST00000412413 NPR1P16066 1061 aa10.89□□□□□ -0.67
AC004009.1-201ENST00000412413 CCDC93Q567U6 631 aa10.89□□□□□ -0.67
AC004009.1-201ENST00000412413 SOGA3Q5TF21 947 aa10.89□□□□□ -0.67
AC004009.1-201ENST00000412413 NBPF10Q6P3W6 841 aaKnown RBP10.89□□□□□ -0.67
AC004009.1-201ENST00000412413 OLFM4Q6UX06 510 aa10.89□□□□□ -0.67
AC004009.1-201ENST00000412413 TPTE2Q6XPS3 522 aa10.89□□□□□ -0.67
AC004009.1-201ENST00000412413 TNS4Q8IZW8 715 aa10.89□□□□□ -0.67
AC004009.1-201ENST00000412413 NBPF15Q8N660 670 aa10.89□□□□□ -0.67
AC004009.1-201ENST00000412413 ZNF277Q9NRM2 450 aaPredicted RBP10.89□□□□□ -0.67
AC004009.1-201ENST00000412413 MKRN1Q9UHC7 482 aaKnown RBP10.89□□□□□ -0.67
AC004009.1-201ENST00000412413 HSPA1AP0DMV8 641 aaKnown RBP10.88□□□□□ -0.67
AC004009.1-201ENST00000412413 HSPA1BP0DMV9 641 aaKnown RBP10.88□□□□□ -0.67
AC004009.1-201ENST00000412413 TAF7Q15545 349 aaPredicted RBP10.88□□□□□ -0.67
AC004009.1-201ENST00000412413 HLFQ16534 295 aa10.88□□□□□ -0.67
AC004009.1-201ENST00000412413 EAPPQ56P03 285 aaPredicted RBP10.88□□□□□ -0.67
AC004009.1-201ENST00000412413 CLEC4GQ6UXB4 293 aa10.88□□□□□ -0.67
AC004009.1-201ENST00000412413 EFCAB3Q8N7B9 438 aa10.88□□□□□ -0.67
AC004009.1-201ENST00000412413 RRP7AQ9Y3A4 280 aaKnown RBP10.88□□□□□ -0.67
AC004009.1-201ENST00000412413 LTBP3Q9NS15 1303 aa10.87□□□□□ -0.67
AC004009.1-201ENST00000412413 AFDNP55196 1824 aaKnown RBP10.87□□□□□ -0.67
AC004009.1-201ENST00000412413 MYL6BP14649 208 aa10.87□□□□□ -0.67
AC004009.1-201ENST00000412413 THUMPD2Q9BTF0 503 aaKnown RBP10.87□□□□□ -0.67
AC004009.1-201ENST00000412413 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.87□□□□□ -0.67
AC004009.1-201ENST00000412413 WDR90Q96KV7 1748 aa10.87□□□□□ -0.67
AC004009.1-201ENST00000412413 NRXN2Q9P2S2 1712 aa10.87□□□□□ -0.67
AC004009.1-201ENST00000412413 TCERG1O14776 1098 aaKnown RBP10.86□□□□□ -0.67
AC004009.1-201ENST00000412413 GPTP24298 496 aa10.86□□□□□ -0.67
AC004009.1-201ENST00000412413 FKBP4Q02790 459 aaKnown RBP eCLIP10.86□□□□□ -0.67
AC004009.1-201ENST00000412413 NUTM1Q86Y26 1132 aa10.86□□□□□ -0.67
AC004009.1-201ENST00000412413 TNRC6CQ9HCJ0 1690 aaKnown RBP10.85□□□□□ -0.67
AC004009.1-201ENST00000412413 ZNF541Q9H0D2 1346 aa10.85□□□□□ -0.67
AC004009.1-201ENST00000412413 UBR2Q8IWV8 1755 aa10.85□□□□□ -0.67
AC004009.1-201ENST00000412413 IQCA1LA6NCM1 817 aa10.85□□□□□ -0.67
AC004009.1-201ENST00000412413 HTATSF1O43719 755 aaKnown RBP10.85□□□□□ -0.67
AC004009.1-201ENST00000412413 KIF6Q6ZMV9 814 aa10.85□□□□□ -0.67
AC004009.1-201ENST00000412413 SYNE4Q8N205 404 aa10.85□□□□□ -0.67
AC004009.1-201ENST00000412413 C7orf43Q8WVR3 580 aa10.85□□□□□ -0.67
AC004009.1-201ENST00000412413 ZBTB3Q9H5J0 574 aa10.85□□□□□ -0.67
AC004009.1-201ENST00000412413 TTLL7Q6ZT98 887 aa10.84□□□□□ -0.67
AC004009.1-201ENST00000412413 RTKN2Q8IZC4 609 aa10.84□□□□□ -0.67
AC004009.1-201ENST00000412413 PNISRQ8TF01 805 aaKnown RBP10.84□□□□□ -0.67
AC004009.1-201ENST00000412413 TAF1DQ9H5J8 278 aaPredicted RBP10.84□□□□□ -0.67
AC004009.1-201ENST00000412413 GJA3Q9Y6H8 435 aa10.84□□□□□ -0.67
AC004009.1-201ENST00000412413 SCN7AQ01118 1682 aa10.84□□□□□ -0.67
AC004009.1-201ENST00000412413 ALDH1B1P30837 517 aa10.83□□□□□ -0.68
AC004009.1-201ENST00000412413 IARSP41252 1262 aaKnown RBP10.83□□□□□ -0.68
AC004009.1-201ENST00000412413 LDHDQ86WU2 507 aa10.83□□□□□ -0.68
AC004009.1-201ENST00000412413 RPGRQ92834 1020 aaKnown RBP10.83□□□□□ -0.68
AC004009.1-201ENST00000412413 HACL1Q9UJ83 578 aa10.83□□□□□ -0.68
AC004009.1-201ENST00000412413 SBF1O95248 1867 aa10.83□□□□□ -0.68
AC004009.1-201ENST00000412413 RNF123Q5XPI4 1314 aa10.83□□□□□ -0.68
AC004009.1-201ENST00000412413 MAPK8IP3Q9UPT6 1336 aa10.83□□□□□ -0.68
AC004009.1-201ENST00000412413 ABCC12Q96J65 1359 aa10.82□□□□□ -0.68
AC004009.1-201ENST00000412413 COL11A2P13942 1736 aaPredicted RBP10.82□□□□□ -0.68
AC004009.1-201ENST00000412413 EIF2S2P20042 333 aaKnown RBP10.82□□□□□ -0.68
AC004009.1-201ENST00000412413 EPHX2P34913 555 aa10.82□□□□□ -0.68
AC004009.1-201ENST00000412413 EIF4A1P60842 406 aaKnown RBP10.82□□□□□ -0.68
AC004009.1-201ENST00000412413 NFE2L2Q16236 605 aa10.82□□□□□ -0.68
AC004009.1-201ENST00000412413 SLC51AQ86UW1 340 aa10.82□□□□□ -0.68
AC004009.1-201ENST00000412413 JDP2Q8WYK2 163 aa10.82□□□□□ -0.68
AC004009.1-201ENST00000412413 NYXQ9GZU5 481 aa10.82□□□□□ -0.68
AC004009.1-201ENST00000412413 ANKRD31Q8N7Z5 1873 aa10.82□□□□□ -0.68
AC004009.1-201ENST00000412413 MAP3K15Q6ZN16 1313 aa10.82□□□□□ -0.68
AC004009.1-201ENST00000412413 TIAM2Q8IVF5 1701 aa10.81□□□□□ -0.68
AC004009.1-201ENST00000412413 DLEC1Q9Y238 1755 aa10.81□□□□□ -0.68
AC004009.1-201ENST00000412413 KLRG2A4D1S0 409 aaPredicted RBP10.81□□□□□ -0.68
AC004009.1-201ENST00000412413 SUSD4Q5VX71 490 aa10.81□□□□□ -0.68
AC004009.1-201ENST00000412413 MAP1SQ66K74 1059 aaPredicted RBP10.81□□□□□ -0.68
AC004009.1-201ENST00000412413 SLC39A7Q92504 469 aa10.81□□□□□ -0.68
AC004009.1-201ENST00000412413 NECTIN2Q92692 538 aa10.81□□□□□ -0.68
AC004009.1-201ENST00000412413 L3MBTL3Q96JM7 780 aaPredicted RBP10.81□□□□□ -0.68
AC004009.1-201ENST00000412413 TSPYL4Q9UJ04 414 aa10.81□□□□□ -0.68
AC004009.1-201ENST00000412413 SLX4Q8IY92 1834 aa10.8□□□□□ -0.68
AC004009.1-201ENST00000412413 TMEM88BA6NKF7 163 aa10.8□□□□□ -0.68
AC004009.1-201ENST00000412413 ERVV-1B6SEH8 477 aa10.8□□□□□ -0.68
AC004009.1-201ENST00000412413 EIF6P56537 245 aaKnown RBP10.8□□□□□ -0.68
AC004009.1-201ENST00000412413 IER5LQ5T953 404 aa10.8□□□□□ -0.68
AC004009.1-201ENST00000412413 LARGE2Q8N3Y3 721 aa10.8□□□□□ -0.68
AC004009.1-201ENST00000412413 ZNF428Q96B54 188 aa10.8□□□□□ -0.68
AC004009.1-201ENST00000412413 AIDAQ96BJ3 306 aa10.8□□□□□ -0.68
AC004009.1-201ENST00000412413 RBM17Q96I25 401 aaKnown RBP10.8□□□□□ -0.68
AC004009.1-201ENST00000412413 PPEF1O14829 653 aaPredicted RBP10.79□□□□□ -0.68
AC004009.1-201ENST00000412413 ANXA1P04083 346 aa10.79□□□□□ -0.68
AC004009.1-201ENST00000412413 LMOD1P29536 600 aaPredicted RBP10.79□□□□□ -0.68
AC004009.1-201ENST00000412413 VEGFBP49765 207 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms