RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 THUMPD2Q9BTF0 503 aaKnown RBP22.07■■□□□ 1.12
MRPL55-220ENST00000411464 ABCC12Q96J65 1359 aa22.07■■□□□ 1.12
MRPL55-220ENST00000411464 FOXN1O15353 648 aa22.06■■□□□ 1.12
MRPL55-220ENST00000411464 SUSD4Q5VX71 490 aa22.06■■□□□ 1.12
MRPL55-220ENST00000411464 MAP1SQ66K74 1059 aaPredicted RBP22.06■■□□□ 1.12
MRPL55-220ENST00000411464 RBM17Q96I25 401 aaKnown RBP22.06■■□□□ 1.12
MRPL55-220ENST00000411464 GJA3Q9Y6H8 435 aa22.06■■□□□ 1.12
MRPL55-220ENST00000411464 ARFGEF2Q9Y6D5 1785 aa22.06■■□□□ 1.12
MRPL55-220ENST00000411464 MAPK8IP3Q9UPT6 1336 aa22.06■■□□□ 1.12
MRPL55-220ENST00000411464 LMOD1P29536 600 aaPredicted RBP22.04■■□□□ 1.12
MRPL55-220ENST00000411464 ZNF34Q8IZ26 560 aa22.04■■□□□ 1.12
MRPL55-220ENST00000411464 LARGE2Q8N3Y3 721 aa22.04■■□□□ 1.12
MRPL55-220ENST00000411464 CRAMP1Q96RY5 1269 aa22.04■■□□□ 1.12
MRPL55-220ENST00000411464 TMX4Q9H1E5 349 aaPredicted RBP22.04■■□□□ 1.12
MRPL55-220ENST00000411464 UBN2Q6ZU65 1347 aa22.04■■□□□ 1.12
MRPL55-220ENST00000411464 CACNA1SQ13698 1873 aa22.03■■□□□ 1.12
MRPL55-220ENST00000411464 TCERG1O14776 1098 aaKnown RBP22.03■■□□□ 1.12
MRPL55-220ENST00000411464 CTCFP49711 727 aaPredicted RBP22.03■■□□□ 1.12
MRPL55-220ENST00000411464 DEFB115Q30KQ5 88 aa22.03■■□□□ 1.12
MRPL55-220ENST00000411464 GIGYF2Q6Y7W6 1299 aaKnown RBP22.03■■□□□ 1.12
MRPL55-220ENST00000411464 PPP1R42Q7Z4L9 355 aa22.03■■□□□ 1.12
MRPL55-220ENST00000411464 SCN4AP35499 1836 aa22.03■■□□□ 1.12
MRPL55-220ENST00000411464 ERBB4Q15303 1308 aa22.03■■□□□ 1.12
MRPL55-220ENST00000411464 IBTKQ9P2D0 1353 aaPredicted RBP22.02■■□□□ 1.12
MRPL55-220ENST00000411464 PPEF1O14829 653 aaPredicted RBP22.02■■□□□ 1.12
MRPL55-220ENST00000411464 PRDM10Q9NQV6 1147 aa22.02■■□□□ 1.12
MRPL55-220ENST00000411464 PARP10Q53GL7 1025 aa22.01■■□□□ 1.11
MRPL55-220ENST00000411464 NLRP3Q96P20 1036 aa22.01■■□□□ 1.11
MRPL55-220ENST00000411464 TSPYL4Q9UJ04 414 aa22.01■■□□□ 1.11
MRPL55-220ENST00000411464 SNED1Q8TER0 1413 aa22■■□□□ 1.11
MRPL55-220ENST00000411464 NTSR2O95665 410 aa22■■□□□ 1.11
MRPL55-220ENST00000411464 NIM1KQ8IY84 436 aa22■■□□□ 1.11
MRPL55-220ENST00000411464 ABT1Q9ULW3 272 aaKnown RBP22■■□□□ 1.11
MRPL55-220ENST00000411464 RIC1Q4ADV7 1423 aa21.99■■□□□ 1.11
MRPL55-220ENST00000411464 RASSF10A6NK89 507 aa21.99■■□□□ 1.11
MRPL55-220ENST00000411464 EIF2S2P20042 333 aaKnown RBP21.99■■□□□ 1.11
MRPL55-220ENST00000411464 WBP1LQ9NX94 342 aa21.99■■□□□ 1.11
MRPL55-220ENST00000411464 EPS15P42566 896 aa21.98■■□□□ 1.11
MRPL55-220ENST00000411464 C3orf67Q6ZVT6 689 aa21.98■■□□□ 1.11
MRPL55-220ENST00000411464 UTP14AQ9BVJ6 771 aaKnown RBP21.98■■□□□ 1.11
MRPL55-220ENST00000411464 DDX21Q9NR30 783 aaKnown RBP eCLIP21.98■■□□□ 1.11
MRPL55-220ENST00000411464 PPIP5K2O43314 1243 aa21.97■■□□□ 1.11
MRPL55-220ENST00000411464 SCNN1DP51172 638 aa21.97■■□□□ 1.11
MRPL55-220ENST00000411464 RIPK4P57078 832 aa21.96■■□□□ 1.11
MRPL55-220ENST00000411464 SLC10A5Q5PT55 438 aa21.96■■□□□ 1.11
MRPL55-220ENST00000411464 USP50Q70EL3 339 aaPredicted RBP21.96■■□□□ 1.11
MRPL55-220ENST00000411464 VPS33BQ9H267 617 aa21.96■■□□□ 1.11
MRPL55-220ENST00000411464 ATP6V0A2Q9Y487 856 aa21.96■■□□□ 1.11
MRPL55-220ENST00000411464 WDR33Q9C0J8 1336 aaKnown RBP21.96■■□□□ 1.11
MRPL55-220ENST00000411464 LAMB4A4D0S4 1761 aa21.95■■□□□ 1.1
MRPL55-220ENST00000411464 LBX1P52954 281 aa21.95■■□□□ 1.1
MRPL55-220ENST00000411464 MAP2K1Q02750 393 aaPredicted RBP21.95■■□□□ 1.1
MRPL55-220ENST00000411464 PDIA6Q15084 440 aa21.95■■□□□ 1.1
MRPL55-220ENST00000411464 SUPT20HQ8NEM7 779 aa21.95■■□□□ 1.1
MRPL55-220ENST00000411464 BABAM1Q9NWV8 329 aa21.95■■□□□ 1.1
MRPL55-220ENST00000411464 AOC3Q16853 763 aa21.94■■□□□ 1.1
MRPL55-220ENST00000411464 LRP10Q7Z4F1 713 aa21.94■■□□□ 1.1
MRPL55-220ENST00000411464 SLC51AQ86UW1 340 aa21.94■■□□□ 1.1
MRPL55-220ENST00000411464 BBOX1O75936 387 aa21.93■■□□□ 1.1
MRPL55-220ENST00000411464 KDM3BQ7LBC6 1761 aa21.92■■□□□ 1.1
MRPL55-220ENST00000411464 COL4A5P29400 1685 aa21.92■■□□□ 1.1
MRPL55-220ENST00000411464 ANXA1P04083 346 aa21.92■■□□□ 1.1
MRPL55-220ENST00000411464 LMOD3Q0VAK6 560 aa21.92■■□□□ 1.1
MRPL55-220ENST00000411464 PROSER3Q2NL68 480 aa21.92■■□□□ 1.1
MRPL55-220ENST00000411464 HSP90AB3PQ58FF7 597 aa21.92■■□□□ 1.1
MRPL55-220ENST00000411464 PAXIP1Q6ZW49 1069 aaPredicted RBP21.92■■□□□ 1.1
MRPL55-220ENST00000411464 ZNRF3Q9ULT6 936 aa21.92■■□□□ 1.1
MRPL55-220ENST00000411464 ADAMTSL1Q8N6G6 1762 aa21.92■■□□□ 1.1
MRPL55-220ENST00000411464 ABCC4O15439 1325 aa21.91■■□□□ 1.1
MRPL55-220ENST00000411464 ECE1P42892 770 aa21.91■■□□□ 1.1
MRPL55-220ENST00000411464 AIMP1Q12904 312 aaKnown RBP21.91■■□□□ 1.1
MRPL55-220ENST00000411464 DPP8Q6V1X1 898 aaPredicted RBP21.91■■□□□ 1.1
MRPL55-220ENST00000411464 COPS6Q7L5N1 327 aa21.91■■□□□ 1.1
MRPL55-220ENST00000411464 ADARB2Q9NS39 739 aaKnown RBP21.91■■□□□ 1.1
MRPL55-220ENST00000411464 GPRC5DQ9NZD1 345 aa21.91■■□□□ 1.1
MRPL55-220ENST00000411464 FMR1Q06787 632 aaKnown RBP eCLIP21.9■■□□□ 1.1
MRPL55-220ENST00000411464 CXCL9Q07325 125 aa21.9■■□□□ 1.1
MRPL55-220ENST00000411464 SP8Q8IXZ3 490 aa21.9■■□□□ 1.1
MRPL55-220ENST00000411464 NECTIN2Q92692 538 aa21.9■■□□□ 1.1
MRPL55-220ENST00000411464 CAPNS2Q96L46 248 aa21.9■■□□□ 1.1
MRPL55-220ENST00000411464 RTFDC1Q9BY42 306 aaPredicted RBP21.9■■□□□ 1.1
MRPL55-220ENST00000411464 NUP98P52948 1817 aa21.9■■□□□ 1.1
MRPL55-220ENST00000411464 TRAF5O00463 557 aa21.89■■□□□ 1.09
MRPL55-220ENST00000411464 HSPA8P11142 646 aaKnown RBP21.89■■□□□ 1.09
MRPL55-220ENST00000411464 HCLS1P14317 486 aaPredicted RBP21.89■■□□□ 1.09
MRPL55-220ENST00000411464 TMPOP42166 694 aaKnown RBP21.89■■□□□ 1.09
MRPL55-220ENST00000411464 DDX46Q7L014 1031 aaKnown RBP21.89■■□□□ 1.09
MRPL55-220ENST00000411464 MPNDQ8N594 471 aa21.89■■□□□ 1.09
MRPL55-220ENST00000411464 XAGE3Q8WTP9 111 aa21.89■■□□□ 1.09
MRPL55-220ENST00000411464 BEGAINQ9BUH8 593 aa21.89■■□□□ 1.09
MRPL55-220ENST00000411464 TRMT112Q9UI30 125 aaKnown RBP21.89■■□□□ 1.09
MRPL55-220ENST00000411464 GRM1Q13255 1194 aa21.88■■□□□ 1.09
MRPL55-220ENST00000411464 TCIRG1Q13488 830 aa21.88■■□□□ 1.09
MRPL55-220ENST00000411464 CST9Q5W186 159 aa21.88■■□□□ 1.09
MRPL55-220ENST00000411464 NLRP10Q86W26 655 aa21.88■■□□□ 1.09
MRPL55-220ENST00000411464 RALBP1Q15311 655 aa21.87■■□□□ 1.09
MRPL55-220ENST00000411464 GPR101Q96P66 508 aaPredicted RBP21.87■■□□□ 1.09
MRPL55-220ENST00000411464 SH3TC1Q8TE82 1336 aa21.86■■□□□ 1.09
MRPL55-220ENST00000411464 GMPSP49915 693 aaPredicted RBP21.86■■□□□ 1.09
MRPL55-220ENST00000411464 TNIP1Q15025 636 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms