RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 COL26A1Q96A83 441 aa0.94□□□□□ -2.26
RNU4-88P-201ENST00000411220 CRAMP1Q96RY5 1269 aa0.94□□□□□ -2.26
RNU4-88P-201ENST00000411220 FBXO3Q9UK99 471 aa0.94□□□□□ -2.26
RNU4-88P-201ENST00000411220 HOXD8P13378 290 aaPredicted RBP0.93□□□□□ -2.26
RNU4-88P-201ENST00000411220 CD33P20138 364 aa0.93□□□□□ -2.26
RNU4-88P-201ENST00000411220 CPSF6Q16630 551 aaKnown RBP eCLIP0.93□□□□□ -2.26
RNU4-88P-201ENST00000411220 PTPRNQ16849 979 aa0.93□□□□□ -2.26
RNU4-88P-201ENST00000411220 TCERG1LQ5VWI1 586 aa0.93□□□□□ -2.26
RNU4-88P-201ENST00000411220 FIGNL1Q6PIW4 674 aa0.93□□□□□ -2.26
RNU4-88P-201ENST00000411220 DMRTC2Q8IXT2 367 aaPredicted RBP0.93□□□□□ -2.26
RNU4-88P-201ENST00000411220 TMEM130Q8N3G9 435 aa0.93□□□□□ -2.26
RNU4-88P-201ENST00000411220 KDF1Q8NAX2 398 aaPredicted RBP0.93□□□□□ -2.26
RNU4-88P-201ENST00000411220 C1QTNF2Q9BXJ5 285 aa0.93□□□□□ -2.26
RNU4-88P-201ENST00000411220 RUBCNLQ9H714 662 aa0.93□□□□□ -2.26
RNU4-88P-201ENST00000411220 KCNK12Q9HB15 430 aa0.93□□□□□ -2.26
RNU4-88P-201ENST00000411220 ATG3Q9NT62 314 aa0.93□□□□□ -2.26
RNU4-88P-201ENST00000411220 ING1Q9UK53 422 aaPredicted RBP0.93□□□□□ -2.26
RNU4-88P-201ENST00000411220 SPATA31C2B4DYI2 1134 aa0.92□□□□□ -2.26
RNU4-88P-201ENST00000411220 RNASE1P07998 156 aaKnown RBP0.92□□□□□ -2.26
RNU4-88P-201ENST00000411220 KRTAP27-1Q3LI81 207 aa0.92□□□□□ -2.26
RNU4-88P-201ENST00000411220 SLC27A3Q5K4L6 730 aa0.92□□□□□ -2.26
RNU4-88P-201ENST00000411220 TAS1R3Q7RTX0 852 aa0.92□□□□□ -2.26
RNU4-88P-201ENST00000411220 ARMC10Q8N2F6 343 aa0.92□□□□□ -2.26
RNU4-88P-201ENST00000411220 DNAJC5GQ8N7S2 189 aa0.92□□□□□ -2.26
RNU4-88P-201ENST00000411220 PCDHGC4Q9Y5F7 938 aa0.92□□□□□ -2.26
RNU4-88P-201ENST00000411220 A0A1B0GTH6 734 aa0.91□□□□□ -2.26
RNU4-88P-201ENST00000411220 F8W735 103 aaPredicted RBP0.91□□□□□ -2.26
RNU4-88P-201ENST00000411220 ETV2O00321 342 aaPredicted RBP0.91□□□□□ -2.26
RNU4-88P-201ENST00000411220 WASLO00401 505 aaPredicted RBP0.91□□□□□ -2.26
RNU4-88P-201ENST00000411220 KRTAP10-1P60331 282 aa0.91□□□□□ -2.26
RNU4-88P-201ENST00000411220 MPZL3Q6UWV2 235 aa0.91□□□□□ -2.26
RNU4-88P-201ENST00000411220 ILDR2Q71H61 639 aa0.91□□□□□ -2.26
RNU4-88P-201ENST00000411220 TRMT44Q8IYL2 757 aaKnown RBP0.91□□□□□ -2.26
RNU4-88P-201ENST00000411220 ZDHHC14Q8IZN3 488 aa0.91□□□□□ -2.26
RNU4-88P-201ENST00000411220 LRRN4CLQ8ND94 238 aa0.91□□□□□ -2.26
RNU4-88P-201ENST00000411220 IGSF5Q9NSI5 407 aa0.91□□□□□ -2.26
RNU4-88P-201ENST00000411220 SLC5A6Q9Y289 635 aa0.91□□□□□ -2.26
RNU4-88P-201ENST00000411220 WDR33Q9C0J8 1336 aaKnown RBP0.9□□□□□ -2.26
RNU4-88P-201ENST00000411220 ZC3H12DA2A288 527 aaKnown RBP0.9□□□□□ -2.27
RNU4-88P-201ENST00000411220 GRXCR2A6NFK2 248 aa0.9□□□□□ -2.27
RNU4-88P-201ENST00000411220 DDX11L8A8MPP1 907 aa0.9□□□□□ -2.27
RNU4-88P-201ENST00000411220 SIN3BO75182 1162 aa0.9□□□□□ -2.27
RNU4-88P-201ENST00000411220 SYT9Q86SS6 491 aa0.9□□□□□ -2.27
RNU4-88P-201ENST00000411220 CLEC10AQ8IUN9 316 aa0.9□□□□□ -2.27
RNU4-88P-201ENST00000411220 FEZF2Q8TBJ5 459 aa0.9□□□□□ -2.27
RNU4-88P-201ENST00000411220 SH3RF3Q8TEJ3 882 aaPredicted RBP0.9□□□□□ -2.27
RNU4-88P-201ENST00000411220 UBL7Q96S82 380 aaPredicted RBP0.9□□□□□ -2.27
RNU4-88P-201ENST00000411220 OSBPL1AQ9BXW6 950 aa0.9□□□□□ -2.27
RNU4-88P-201ENST00000411220 ADAM7Q9H2U9 754 aa0.9□□□□□ -2.27
RNU4-88P-201ENST00000411220 MBNL3Q9NUK0 354 aaKnown RBP0.9□□□□□ -2.27
RNU4-88P-201ENST00000411220 HOXB6P17509 224 aaKnown RBP0.89□□□□□ -2.27
RNU4-88P-201ENST00000411220 KRTAP10-8P60410 259 aa0.89□□□□□ -2.27
RNU4-88P-201ENST00000411220 RING1Q06587 406 aa0.89□□□□□ -2.27
RNU4-88P-201ENST00000411220 GRM7Q14831 915 aa0.89□□□□□ -2.27
RNU4-88P-201ENST00000411220 PDIA6Q15084 440 aa0.89□□□□□ -2.27
RNU4-88P-201ENST00000411220 FAM161AQ3B820 660 aa0.89□□□□□ -2.27
RNU4-88P-201ENST00000411220 PAPD7Q5XG87 772 aaKnown RBP0.89□□□□□ -2.27
RNU4-88P-201ENST00000411220 ZNF574Q6ZN55 896 aaPredicted RBP0.89□□□□□ -2.27
RNU4-88P-201ENST00000411220 FLAD1Q8NFF5 587 aa0.89□□□□□ -2.27
RNU4-88P-201ENST00000411220 UTP4Q969X6 686 aaKnown RBP0.89□□□□□ -2.27
RNU4-88P-201ENST00000411220 FAM83CQ9BQN1 747 aa0.89□□□□□ -2.27
RNU4-88P-201ENST00000411220 MRPL18Q9H0U6 180 aaKnown RBP0.89□□□□□ -2.27
RNU4-88P-201ENST00000411220 KRTAP4-16G5E9R7 235 aaPredicted RBP0.88□□□□□ -2.27
RNU4-88P-201ENST00000411220 CYP26A1O43174 497 aa0.88□□□□□ -2.27
RNU4-88P-201ENST00000411220 MAPTP10636 758 aaKnown RBP0.88□□□□□ -2.27
RNU4-88P-201ENST00000411220 ADH7P40394 386 aa0.88□□□□□ -2.27
RNU4-88P-201ENST00000411220 UVSSAQ2YD98 709 aa0.88□□□□□ -2.27
RNU4-88P-201ENST00000411220 TNFRSF25Q93038 417 aa0.88□□□□□ -2.27
RNU4-88P-201ENST00000411220 MFSD14AQ96MC6 490 aa0.88□□□□□ -2.27
RNU4-88P-201ENST00000411220 ADAMTS6Q9UKP5 1117 aa0.88□□□□□ -2.27
RNU4-88P-201ENST00000411220 MEN1O00255 615 aa0.87□□□□□ -2.27
RNU4-88P-201ENST00000411220 EML3Q32P44 896 aa0.87□□□□□ -2.27
RNU4-88P-201ENST00000411220 CPZQ66K79 652 aa0.87□□□□□ -2.27
RNU4-88P-201ENST00000411220 RETREG3Q86VR2 466 aa0.87□□□□□ -2.27
RNU4-88P-201ENST00000411220 BCL7CQ8WUZ0 217 aaPredicted RBP0.87□□□□□ -2.27
RNU4-88P-201ENST00000411220 DIRC2Q96SL1 478 aa0.87□□□□□ -2.27
RNU4-88P-201ENST00000411220 ZCCHC2Q9C0B9 1178 aaKnown RBP0.87□□□□□ -2.27
RNU4-88P-201ENST00000411220 GRIP2Q9C0E4 1043 aa0.87□□□□□ -2.27
RNU4-88P-201ENST00000411220 JPH1Q9HDC5 661 aaPredicted RBP0.87□□□□□ -2.27
RNU4-88P-201ENST00000411220 CRIM1Q9NZV1 1036 aa0.87□□□□□ -2.27
RNU4-88P-201ENST00000411220 HCN2Q9UL51 889 aa0.87□□□□□ -2.27
RNU4-88P-201ENST00000411220 ATXN7O15265 892 aaPredicted RBP0.86□□□□□ -2.27
RNU4-88P-201ENST00000411220 AFF1P51825 1210 aaKnown RBP0.86□□□□□ -2.27
RNU4-88P-201ENST00000411220 TNP2Q05952 138 aa0.86□□□□□ -2.27
RNU4-88P-201ENST00000411220 CAMK2BQ13554 666 aa0.86□□□□□ -2.27
RNU4-88P-201ENST00000411220 CCDC142Q17RM4 750 aa0.86□□□□□ -2.27
RNU4-88P-201ENST00000411220 SPRED2Q7Z698 418 aa0.86□□□□□ -2.27
RNU4-88P-201ENST00000411220 WFDC3Q8IUB2 231 aa0.86□□□□□ -2.27
RNU4-88P-201ENST00000411220 STK11IPQ8N1F8 1099 aa0.86□□□□□ -2.27
RNU4-88P-201ENST00000411220 CHFRQ96EP1 664 aa0.86□□□□□ -2.27
RNU4-88P-201ENST00000411220 Q96M66 194 aa0.86□□□□□ -2.27
RNU4-88P-201ENST00000411220 PDGFDQ9GZP0 370 aaPredicted RBP0.86□□□□□ -2.27
RNU4-88P-201ENST00000411220 NSUN3Q9H649 340 aaKnown RBP0.86□□□□□ -2.27
RNU4-88P-201ENST00000411220 SEMA3GQ9NS98 782 aa0.86□□□□□ -2.27
RNU4-88P-201ENST00000411220 HS3ST3A1Q9Y663 406 aa0.86□□□□□ -2.27
RNU4-88P-201ENST00000411220 DCDC2BA2VCK2 349 aa0.85□□□□□ -2.27
RNU4-88P-201ENST00000411220 DLL1O00548 723 aa0.85□□□□□ -2.27
RNU4-88P-201ENST00000411220 F13BP05160 661 aa0.85□□□□□ -2.27
RNU4-88P-201ENST00000411220 ADD1P35611 737 aaKnown RBP0.85□□□□□ -2.27
RNU4-88P-201ENST00000411220 LCE1FQ5T754 118 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms