RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 C11orf95C9JLR9 678 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-202ENST00000409915 TAGLNQ01995 201 aaKnown RBP5.97□□□□□ -1.45
SF3B1-202ENST00000409915 QPCTQ16769 361 aa5.97□□□□□ -1.45
SF3B1-202ENST00000409915 TBC1D9Q6ZT07 1266 aa5.97□□□□□ -1.45
SF3B1-202ENST00000409915 HDGFL2Q7Z4V5 671 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-202ENST00000409915 METTL3Q86U44 580 aaKnown RBP5.97□□□□□ -1.45
SF3B1-202ENST00000409915 NME9Q86XW9 330 aa5.97□□□□□ -1.45
SF3B1-202ENST00000409915 SPIRE2Q8WWL2 714 aa5.97□□□□□ -1.45
SF3B1-202ENST00000409915 NGLY1Q96IV0 654 aa5.97□□□□□ -1.45
SF3B1-202ENST00000409915 LNPKQ9C0E8 428 aa5.97□□□□□ -1.45
SF3B1-202ENST00000409915 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.97□□□□□ -1.45
SF3B1-202ENST00000409915 SUGT1Q9Y2Z0 365 aa5.97□□□□□ -1.45
SF3B1-202ENST00000409915 USP19O94966 1318 aa5.97□□□□□ -1.45
SF3B1-202ENST00000409915 ANKRD36BQ8N2N9 1353 aa5.96□□□□□ -1.45
SF3B1-202ENST00000409915 PLCH1Q4KWH8 1693 aa5.96□□□□□ -1.46
SF3B1-202ENST00000409915 NBPF26B4DH59 902 aa5.96□□□□□ -1.46
SF3B1-202ENST00000409915 SPTLC1O15269 473 aa5.96□□□□□ -1.46
SF3B1-202ENST00000409915 TPD52L2O43399 206 aaKnown RBP5.96□□□□□ -1.46
SF3B1-202ENST00000409915 GPR37L1O60883 481 aa5.96□□□□□ -1.46
SF3B1-202ENST00000409915 SSFA2P28290 1259 aa5.96□□□□□ -1.46
SF3B1-202ENST00000409915 CHRNA2Q15822 529 aa5.96□□□□□ -1.46
SF3B1-202ENST00000409915 FBXO33Q7Z6M2 555 aa5.96□□□□□ -1.46
SF3B1-202ENST00000409915 EXOC8Q8IYI6 725 aa5.96□□□□□ -1.46
SF3B1-202ENST00000409915 LRCH3Q96II8 777 aa5.96□□□□□ -1.46
SF3B1-202ENST00000409915 EYA1Q99502 592 aa5.96□□□□□ -1.46
SF3B1-202ENST00000409915 TANGO6Q9C0B7 1094 aa5.96□□□□□ -1.46
SF3B1-202ENST00000409915 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.96□□□□□ -1.46
SF3B1-202ENST00000409915 TERF2IPQ9NYB0 399 aa5.96□□□□□ -1.46
SF3B1-202ENST00000409915 NOVA2Q9UNW9 492 aaKnown RBP5.96□□□□□ -1.46
SF3B1-202ENST00000409915 RBM19Q9Y4C8 960 aaKnown RBP5.96□□□□□ -1.46
SF3B1-202ENST00000409915 EDC4Q6P2E9 1401 aaKnown RBP5.96□□□□□ -1.46
SF3B1-202ENST00000409915 MARF1Q9Y4F3 1742 aaKnown RBP5.96□□□□□ -1.46
SF3B1-202ENST00000409915 KIAA0232Q92628 1395 aa5.95□□□□□ -1.46
SF3B1-202ENST00000409915 NINLQ9Y2I6 1382 aa5.95□□□□□ -1.46
SF3B1-202ENST00000409915 SLIT3O75094 1523 aa5.95□□□□□ -1.46
SF3B1-202ENST00000409915 RTL5Q5HYW3 569 aaPredicted RBP5.95□□□□□ -1.46
SF3B1-202ENST00000409915 SWT1Q5T5J6 900 aaKnown RBP5.95□□□□□ -1.46
SF3B1-202ENST00000409915 GORABQ5T7V8 394 aa5.95□□□□□ -1.46
SF3B1-202ENST00000409915 RSBN1LQ6PCB5 846 aaPredicted RBP5.95□□□□□ -1.46
SF3B1-202ENST00000409915 CDCA7Q9BWT1 371 aaPredicted RBP5.95□□□□□ -1.46
SF3B1-202ENST00000409915 NSD3Q9BZ95 1437 aa5.95□□□□□ -1.46
SF3B1-202ENST00000409915 PRDM11Q9NQV5 511 aa5.95□□□□□ -1.46
SF3B1-202ENST00000409915 USP21Q9UK80 565 aa5.95□□□□□ -1.46
SF3B1-202ENST00000409915 BCL9LQ86UU0 1499 aa5.95□□□□□ -1.46
SF3B1-202ENST00000409915 KIF7Q2M1P5 1343 aa5.95□□□□□ -1.46
SF3B1-202ENST00000409915 TTC21AQ8NDW8 1320 aa5.95□□□□□ -1.46
SF3B1-202ENST00000409915 SLIT2O94813 1529 aa5.94□□□□□ -1.46
SF3B1-202ENST00000409915 OVOS2A0A0J9YW53 1432 aa5.94□□□□□ -1.46
SF3B1-202ENST00000409915 OVOS2Q6IE36 1432 aa5.94□□□□□ -1.46
SF3B1-202ENST00000409915 FAM83GA6ND36 823 aa5.94□□□□□ -1.46
SF3B1-202ENST00000409915 ATP9BO43861 1147 aa5.94□□□□□ -1.46
SF3B1-202ENST00000409915 LILRB3O75022 631 aa5.94□□□□□ -1.46
SF3B1-202ENST00000409915 RNF40O75150 1001 aa5.94□□□□□ -1.46
SF3B1-202ENST00000409915 SOX11P35716 441 aa5.94□□□□□ -1.46
SF3B1-202ENST00000409915 NLRP13Q86W25 1043 aa5.94□□□□□ -1.46
SF3B1-202ENST00000409915 GPATCH3Q96I76 525 aa5.94□□□□□ -1.46
SF3B1-202ENST00000409915 CUEDC1Q9NWM3 386 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-202ENST00000409915 TSR3Q9UJK0 312 aaKnown RBP5.94□□□□□ -1.46
SF3B1-202ENST00000409915 ADGRG1Q9Y653 693 aa5.94□□□□□ -1.46
SF3B1-202ENST00000409915 NFAT5O94916 1531 aa5.94□□□□□ -1.46
SF3B1-202ENST00000409915 NRAPQ86VF7 1730 aa5.94□□□□□ -1.46
SF3B1-202ENST00000409915 BRD4O60885 1362 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-202ENST00000409915 COL14A1Q05707 1796 aaKnown RBP5.93□□□□□ -1.46
SF3B1-202ENST00000409915 ATRNO75882 1429 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 TLDC2A0PJX2 215 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 GCP02774 474 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 OATP04181 439 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 FBLN1P23142 703 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 APLP1P51693 650 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 PPP4CP60510 307 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 FGD1P98174 961 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 HDLBPQ00341 1268 aaKnown RBP5.93□□□□□ -1.46
SF3B1-202ENST00000409915 SEMA3FQ13275 785 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 ZNF772Q68DY9 489 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-202ENST00000409915 PIK3R5Q8WYR1 880 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 CARD14Q9BXL6 1004 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 GGNBP2Q9H3C7 697 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 QTRT2Q9H974 415 aaKnown RBP5.93□□□□□ -1.46
SF3B1-202ENST00000409915 METTL14Q9HCE5 456 aaKnown RBP5.93□□□□□ -1.46
SF3B1-202ENST00000409915 HMX1Q9NP08 348 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-202ENST00000409915 STRN4Q9NRL3 753 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 BTG4Q9NY30 223 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 KLHL42Q9P2K6 505 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 WASHC2AQ641Q2 1341 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 USP31Q70CQ4 1352 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 CCDC7Q96M83 1385 aa5.93□□□□□ -1.46
SF3B1-202ENST00000409915 RGS12O14924 1447 aa5.92□□□□□ -1.46
SF3B1-202ENST00000409915 USP54Q70EL1 1684 aa5.92□□□□□ -1.46
SF3B1-202ENST00000409915 LMO7Q8WWI1 1683 aa5.92□□□□□ -1.46
SF3B1-202ENST00000409915 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.92□□□□□ -1.46
SF3B1-202ENST00000409915 hCG_2014768A0A024R1R8 64 aa5.92□□□□□ -1.46
SF3B1-202ENST00000409915 IGBP1P78318 339 aa5.92□□□□□ -1.46
SF3B1-202ENST00000409915 GLIPR1L2Q4G1C9 344 aa5.92□□□□□ -1.46
SF3B1-202ENST00000409915 C9orf131Q5VYM1 1079 aa5.92□□□□□ -1.46
SF3B1-202ENST00000409915 SDE2Q6IQ49 451 aa5.92□□□□□ -1.46
SF3B1-202ENST00000409915 UNC5CLQ8IV45 518 aa5.92□□□□□ -1.46
SF3B1-202ENST00000409915 LARGE2Q8N3Y3 721 aa5.92□□□□□ -1.46
SF3B1-202ENST00000409915 TRIM34Q9BYJ4 488 aa5.92□□□□□ -1.46
SF3B1-202ENST00000409915 PANK3Q9H999 370 aa5.92□□□□□ -1.46
SF3B1-202ENST00000409915 GLI3P10071 1580 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms