RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 SRGNP10124 158 aa40.03■■■■■ 4
TRAF3IP1-203ENST00000409739 YY1P25490 414 aa40.03■■■■■ 4
TRAF3IP1-203ENST00000409739 SLFN5Q08AF3 891 aa40.03■■■■■ 4
TRAF3IP1-203ENST00000409739 ISCA1Q9BUE6 129 aa40.03■■■■■ 4
TRAF3IP1-203ENST00000409739 UTP14AQ9BVJ6 771 aaKnown RBP40.03■■■■■ 4
TRAF3IP1-203ENST00000409739 TTLL6Q8N841 843 aa40.02■■■■■ 4
TRAF3IP1-203ENST00000409739 ZNF622Q969S3 477 aaKnown RBP eCLIP40.02■■■■■ 4
TRAF3IP1-203ENST00000409739 SLC4A2P04920 1241 aa40.01■■■■■ 4
TRAF3IP1-203ENST00000409739 G2E3Q7L622 706 aa40.01■■■■■ 4
TRAF3IP1-203ENST00000409739 DDX58O95786 925 aaKnown RBP40■■■■□ 3.99
TRAF3IP1-203ENST00000409739 CDCA7LQ96GN5 454 aa40■■■■□ 3.99
TRAF3IP1-203ENST00000409739 RNF123Q5XPI4 1314 aa39.99■■■■□ 3.99
TRAF3IP1-203ENST00000409739 SBF1O95248 1867 aa39.99■■■■□ 3.99
TRAF3IP1-203ENST00000409739 ATP5J2-PTCD1G3V325 749 aa39.99■■■■□ 3.99
TRAF3IP1-203ENST00000409739 STYK1Q6J9G0 422 aa39.99■■■■□ 3.99
TRAF3IP1-203ENST00000409739 MASTLQ96GX5 879 aa39.99■■■■□ 3.99
TRAF3IP1-203ENST00000409739 ADCY9O60503 1353 aa39.97■■■■□ 3.99
TRAF3IP1-203ENST00000409739 FER1L6Q2WGJ9 1857 aa39.96■■■■□ 3.99
TRAF3IP1-203ENST00000409739 ZNF428Q96B54 188 aa39.95■■■■□ 3.99
TRAF3IP1-203ENST00000409739 TRMT112Q9UI30 125 aaKnown RBP39.95■■■■□ 3.99
TRAF3IP1-203ENST00000409739 CCDC88AQ3V6T2 1871 aa39.94■■■■□ 3.98
TRAF3IP1-203ENST00000409739 NPR1P16066 1061 aa39.94■■■■□ 3.98
TRAF3IP1-203ENST00000409739 FLIIQ13045 1269 aa39.94■■■■□ 3.98
TRAF3IP1-203ENST00000409739 CRY2Q49AN0 593 aa39.94■■■■□ 3.98
TRAF3IP1-203ENST00000409739 KSR2Q6VAB6 950 aa39.94■■■■□ 3.98
TRAF3IP1-203ENST00000409739 CNKSR1Q969H4 720 aa39.94■■■■□ 3.98
TRAF3IP1-203ENST00000409739 MYD88Q99836 296 aa39.94■■■■□ 3.98
TRAF3IP1-203ENST00000409739 MAP3K2Q9Y2U5 619 aa39.94■■■■□ 3.98
TRAF3IP1-203ENST00000409739 PI4KAP2A4QPH2 592 aa39.93■■■■□ 3.98
TRAF3IP1-203ENST00000409739 TRIM28Q13263 835 aaKnown RBP39.93■■■■□ 3.98
TRAF3IP1-203ENST00000409739 ARHGAP27Q6ZUM4 889 aa39.93■■■■□ 3.98
TRAF3IP1-203ENST00000409739 TRMT2AQ8IZ69 625 aaKnown RBP39.93■■■■□ 3.98
TRAF3IP1-203ENST00000409739 PI4KAP1Q8N8J0 262 aa39.93■■■■□ 3.98
TRAF3IP1-203ENST00000409739 METTL22Q9BUU2 404 aaPredicted RBP39.93■■■■□ 3.98
TRAF3IP1-203ENST00000409739 SH3TC1Q8TE82 1336 aa39.91■■■■□ 3.98
TRAF3IP1-203ENST00000409739 SLC10A5Q5PT55 438 aa39.91■■■■□ 3.98
TRAF3IP1-203ENST00000409739 SYNE4Q8N205 404 aa39.91■■■■□ 3.98
TRAF3IP1-203ENST00000409739 PRPF40BQ6NWY9 871 aaKnown RBP39.9■■■■□ 3.98
TRAF3IP1-203ENST00000409739 C3orf67Q6ZVT6 689 aa39.9■■■■□ 3.98
TRAF3IP1-203ENST00000409739 HNRNPUQ00839 825 aaKnown RBP eCLIP39.87■■■■□ 3.97
TRAF3IP1-203ENST00000409739 FKBP5Q13451 457 aaPredicted RBP39.87■■■■□ 3.97
TRAF3IP1-203ENST00000409739 HCLS1P14317 486 aaPredicted RBP39.86■■■■□ 3.97
TRAF3IP1-203ENST00000409739 TAF1P21675 1872 aa39.85■■■■□ 3.97
TRAF3IP1-203ENST00000409739 CCDC191Q8NCU4 936 aa39.85■■■■□ 3.97
TRAF3IP1-203ENST00000409739 RPGRQ92834 1020 aaKnown RBP39.85■■■■□ 3.97
TRAF3IP1-203ENST00000409739 NLRP3Q96P20 1036 aa39.85■■■■□ 3.97
TRAF3IP1-203ENST00000409739 C21orf2O43822 256 aa39.84■■■■□ 3.97
TRAF3IP1-203ENST00000409739 FAM89AQ96GI7 184 aa39.84■■■■□ 3.97
TRAF3IP1-203ENST00000409739 ZNF219Q9P2Y4 722 aaPredicted RBP39.84■■■■□ 3.97
TRAF3IP1-203ENST00000409739 MYH3P11055 1940 aa39.84■■■■□ 3.97
TRAF3IP1-203ENST00000409739 IGKV5-2P06315 115 aa39.82■■■■□ 3.97
TRAF3IP1-203ENST00000409739 HOXA10P31260 410 aaPredicted RBP39.82■■■■□ 3.97
TRAF3IP1-203ENST00000409739 CWC25Q9NXE8 425 aaPredicted RBP39.82■■■■□ 3.97
TRAF3IP1-203ENST00000409739 ALDH1B1P30837 517 aa39.81■■■■□ 3.96
TRAF3IP1-203ENST00000409739 NEXNQ0ZGT2 675 aa39.81■■■■□ 3.96
TRAF3IP1-203ENST00000409739 DICER1Q9UPY3 1922 aaKnown RBP39.81■■■■□ 3.96
TRAF3IP1-203ENST00000409739 RTL5Q5HYW3 569 aaPredicted RBP39.8■■■■□ 3.96
TRAF3IP1-203ENST00000409739 ZBTB38Q8NAP3 1195 aaPredicted RBP39.8■■■■□ 3.96
TRAF3IP1-203ENST00000409739 RASSF7Q02833 373 aa39.79■■■■□ 3.96
TRAF3IP1-203ENST00000409739 DNAAF4Q8WXU2 420 aa39.79■■■■□ 3.96
TRAF3IP1-203ENST00000409739 C7orf43Q8WVR3 580 aa39.78■■■■□ 3.96
TRAF3IP1-203ENST00000409739 TIAM2Q8IVF5 1701 aa39.77■■■■□ 3.96
TRAF3IP1-203ENST00000409739 CWF19L2Q2TBE0 894 aaKnown RBP39.77■■■■□ 3.96
TRAF3IP1-203ENST00000409739 RBM17Q96I25 401 aaKnown RBP39.77■■■■□ 3.96
TRAF3IP1-203ENST00000409739 NFKBIEO00221 500 aa39.76■■■■□ 3.96
TRAF3IP1-203ENST00000409739 PCCAP05165 728 aaPredicted RBP39.76■■■■□ 3.96
TRAF3IP1-203ENST00000409739 CRAMP1Q96RY5 1269 aa39.76■■■■□ 3.96
TRAF3IP1-203ENST00000409739 NEURL1BA8MQ27 555 aa39.75■■■■□ 3.95
TRAF3IP1-203ENST00000409739 IRS4O14654 1257 aaPredicted RBP39.75■■■■□ 3.95
TRAF3IP1-203ENST00000409739 SOGA3Q5TF21 947 aa39.75■■■■□ 3.95
TRAF3IP1-203ENST00000409739 MRPL50Q8N5N7 158 aaKnown RBP39.75■■■■□ 3.95
TRAF3IP1-203ENST00000409739 ZNF784Q8NCA9 323 aaPredicted RBP39.74■■■■□ 3.95
TRAF3IP1-203ENST00000409739 SSH1Q8WYL5 1049 aa39.74■■■■□ 3.95
TRAF3IP1-203ENST00000409739 F6X3S4 739 aa39.73■■■■□ 3.95
TRAF3IP1-203ENST00000409739 ABCC4O15439 1325 aa39.72■■■■□ 3.95
TRAF3IP1-203ENST00000409739 CT47B1P0C2W7 299 aaPredicted RBP39.72■■■■□ 3.95
TRAF3IP1-203ENST00000409739 C9orf131Q5VYM1 1079 aa39.72■■■■□ 3.95
TRAF3IP1-203ENST00000409739 PRELPP51888 382 aa39.71■■■■□ 3.95
TRAF3IP1-203ENST00000409739 CCDC93Q567U6 631 aa39.71■■■■□ 3.95
TRAF3IP1-203ENST00000409739 OLFM4Q6UX06 510 aa39.71■■■■□ 3.95
TRAF3IP1-203ENST00000409739 JARID2Q92833 1246 aaPredicted RBP39.71■■■■□ 3.95
TRAF3IP1-203ENST00000409739 LINS1Q8NG48 757 aa39.7■■■■□ 3.95
TRAF3IP1-203ENST00000409739 SNED1Q8TER0 1413 aa39.7■■■■□ 3.95
TRAF3IP1-203ENST00000409739 ALDH1L2Q3SY69 923 aa39.69■■■■□ 3.94
TRAF3IP1-203ENST00000409739 BCL2L13Q9BXK5 485 aa39.69■■■■□ 3.94
TRAF3IP1-203ENST00000409739 RNF181Q9P0P0 153 aa39.69■■■■□ 3.94
TRAF3IP1-203ENST00000409739 COL4A1P02462 1669 aa39.69■■■■□ 3.94
TRAF3IP1-203ENST00000409739 ZBED9Q6R2W3 1325 aa39.68■■■■□ 3.94
TRAF3IP1-203ENST00000409739 CDHR2Q9BYE9 1310 aa39.68■■■■□ 3.94
TRAF3IP1-203ENST00000409739 LTBP3Q9NS15 1303 aa39.68■■■■□ 3.94
TRAF3IP1-203ENST00000409739 SF3B3Q15393 1217 aaKnown RBP39.68■■■■□ 3.94
TRAF3IP1-203ENST00000409739 LRRC37AA6NMS7 1700 aa39.68■■■■□ 3.94
TRAF3IP1-203ENST00000409739 PPEF1O14829 653 aaPredicted RBP39.67■■■■□ 3.94
TRAF3IP1-203ENST00000409739 TAOK3Q9H2K8 898 aa39.67■■■■□ 3.94
TRAF3IP1-203ENST00000409739 HSP90B1P14625 803 aaKnown RBP39.66■■■■□ 3.94
TRAF3IP1-203ENST00000409739 LMNB1P20700 586 aa39.66■■■■□ 3.94
TRAF3IP1-203ENST00000409739 GCKRQ14397 625 aa39.66■■■■□ 3.94
TRAF3IP1-203ENST00000409739 DDX46Q7L014 1031 aaKnown RBP39.66■■■■□ 3.94
TRAF3IP1-203ENST00000409739 BEND3Q5T5X7 828 aa39.64■■■■□ 3.94
TRAF3IP1-203ENST00000409739 SLC51AQ86UW1 340 aa39.64■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms