RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 RHPN1Q8TCX5 695 aa7.71□□□□□ -1.18
GTF3C3-202ENST00000409364 OTUD7AQ8TE49 926 aaPredicted RBP7.71□□□□□ -1.18
GTF3C3-202ENST00000409364 BCL11AQ9H165 835 aa7.71□□□□□ -1.18
GTF3C3-202ENST00000409364 ZSWIM6Q9HCJ5 1215 aa7.71□□□□□ -1.18
GTF3C3-202ENST00000409364 ROBO1Q9Y6N7 1651 aa7.71□□□□□ -1.18
GTF3C3-202ENST00000409364 AOX1Q06278 1338 aa7.7□□□□□ -1.18
GTF3C3-202ENST00000409364 PTCD1O75127 700 aaKnown RBP7.7□□□□□ -1.18
GTF3C3-202ENST00000409364 PIP4K2BP78356 416 aa7.7□□□□□ -1.18
GTF3C3-202ENST00000409364 MYD88Q99836 296 aa7.7□□□□□ -1.18
GTF3C3-202ENST00000409364 AHDC1Q5TGY3 1603 aaPredicted RBP7.7□□□□□ -1.18
GTF3C3-202ENST00000409364 SALL3Q9BXA9 1300 aa7.7□□□□□ -1.18
GTF3C3-202ENST00000409364 STARD3NLO95772 234 aa7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 SLC4A3P48751 1232 aa7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 LSM11P83369 360 aaKnown RBP eCLIP7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 OS9Q13438 667 aaPredicted RBP7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 CLASRPQ8N2M8 674 aaKnown RBP7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 PIGBQ92521 554 aa7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 SUCLG2Q96I99 432 aa7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 PKD1L3Q7Z443 1732 aa7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 SCN11AQ9UI33 1791 aa7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 NBPF26B4DH59 902 aa7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 REC8O95072 547 aa7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 ADAMTS2O95450 1211 aa7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 A1BGP04217 495 aa7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 G3BP1Q13283 466 aaKnown RBP eCLIP7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 NBPF14Q5TI25 921 aa7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 NBPF10Q6P3W6 841 aaKnown RBP7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 NBPF15Q8N660 670 aa7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 TAOK2Q9UL54 1235 aa7.69□□□□□ -1.18
GTF3C3-202ENST00000409364 G3V3G9 751 aa7.68□□□□□ -1.18
GTF3C3-202ENST00000409364 DCAF8Q5TAQ9 597 aa7.68□□□□□ -1.18
GTF3C3-202ENST00000409364 Q6ZNB5 142 aa7.68□□□□□ -1.18
GTF3C3-202ENST00000409364 HOMEZQ8IX15 550 aa7.68□□□□□ -1.18
GTF3C3-202ENST00000409364 KAZALD1Q96I82 304 aa7.68□□□□□ -1.18
GTF3C3-202ENST00000409364 BICC1Q9H694 974 aaKnown RBP7.68□□□□□ -1.18
GTF3C3-202ENST00000409364 IL1RAPL2Q9NP60 686 aa7.68□□□□□ -1.18
GTF3C3-202ENST00000409364 ATG3Q9NT62 314 aa7.68□□□□□ -1.18
GTF3C3-202ENST00000409364 SIPA1L3O60292 1781 aaPredicted RBP7.68□□□□□ -1.18
GTF3C3-202ENST00000409364 COL15A1P39059 1388 aa7.68□□□□□ -1.18
GTF3C3-202ENST00000409364 SPATA31A1Q5TZJ5 1347 aa7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 A0A087WZG4 1122 aa7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 H7C1W4 665 aa7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 TULP1O00294 542 aaPredicted RBP7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 ERC2O15083 957 aa7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 PIP4K2AP48426 406 aaPredicted RBP7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 MKRN3Q13064 507 aaKnown RBP7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 DDB1Q16531 1140 aa7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 CCDC191Q8NCU4 936 aa7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 SNX21Q969T3 373 aa7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 GPATCH3Q96I76 525 aa7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 USP26Q9BXU7 913 aa7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 TBC1D2Q9BYX2 928 aa7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 ASAP1Q9ULH1 1129 aa7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 DISP2A7MBM2 1401 aa7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 PARP4Q9UKK3 1724 aaKnown RBP7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 TTC41PQ6P2S7 1318 aa7.67□□□□□ -1.18
GTF3C3-202ENST00000409364 NUTM2BA6NNL0 878 aaPredicted RBP7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 NUTM2EB1AL46 878 aaPredicted RBP7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 TRIM6-TRIM34B2RNG4 842 aa7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 ATP5J2-PTCD1G3V325 749 aa7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 EPB41L2O43491 1005 aaKnown RBP7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 TRIM28Q13263 835 aaKnown RBP7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 RABL6Q3YEC7 729 aaPredicted RBP7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 TNS2Q63HR2 1409 aa7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 BARGINQ6ZT62 677 aa7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 TTLL7Q6ZT98 887 aa7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 NUTM1Q86Y26 1132 aa7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 NUTM2AQ8IVF1 878 aaPredicted RBP7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 CWC25Q9NXE8 425 aaPredicted RBP7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 USP42Q9H9J4 1324 aaKnown RBP7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 GLRX3O76003 335 aaKnown RBP7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 IFIT2P09913 472 aaKnown RBP7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 PRIM1P49642 420 aaKnown RBP7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 UBE3BQ7Z3V4 1068 aa7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 HSCBQ8IWL3 235 aa7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 RILPL2Q969X0 211 aa7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 COPRSQ9NQ92 184 aa7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 COL14A1Q05707 1796 aaKnown RBP7.66□□□□□ -1.18
GTF3C3-202ENST00000409364 SPATA31A5Q5VU36 1347 aa7.65□□□□□ -1.18
GTF3C3-202ENST00000409364 SPATA31A7Q8IWB4 1347 aa7.65□□□□□ -1.18
GTF3C3-202ENST00000409364 BCL9O00512 1426 aa7.65□□□□□ -1.18
GTF3C3-202ENST00000409364 CHMLP26374 656 aa7.65□□□□□ -1.18
GTF3C3-202ENST00000409364 CASP7P55210 303 aa7.65□□□□□ -1.18
GTF3C3-202ENST00000409364 TCIRG1Q13488 830 aa7.65□□□□□ -1.18
GTF3C3-202ENST00000409364 KIF6Q6ZMV9 814 aa7.65□□□□□ -1.18
GTF3C3-202ENST00000409364 DNAJC10Q8IXB1 793 aa7.65□□□□□ -1.18
GTF3C3-202ENST00000409364 CNTROBQ8N137 903 aa7.65□□□□□ -1.18
GTF3C3-202ENST00000409364 IL27Q8NEV9 243 aa7.65□□□□□ -1.18
GTF3C3-202ENST00000409364 SYTL4Q96C24 671 aaPredicted RBP7.65□□□□□ -1.18
GTF3C3-202ENST00000409364 ECHDC1Q9NTX5 307 aa7.65□□□□□ -1.18
GTF3C3-202ENST00000409364 PA2G4Q9UQ80 394 aaKnown RBP7.65□□□□□ -1.18
GTF3C3-202ENST00000409364 CCDC9Q9Y3X0 531 aaKnown RBP7.65□□□□□ -1.18
GTF3C3-202ENST00000409364 COL16A1Q07092 1604 aaPredicted RBP7.65□□□□□ -1.18
GTF3C3-202ENST00000409364 COL22A1Q8NFW1 1626 aaPredicted RBP7.64□□□□□ -1.19
GTF3C3-202ENST00000409364 PHLPP1O60346 1717 aa7.64□□□□□ -1.19
GTF3C3-202ENST00000409364 SASH1O94885 1247 aa7.64□□□□□ -1.19
GTF3C3-202ENST00000409364 CYP19A1P11511 503 aaPredicted RBP7.64□□□□□ -1.19
GTF3C3-202ENST00000409364 RABEP1Q15276 862 aa7.64□□□□□ -1.19
GTF3C3-202ENST00000409364 HSP90AB3PQ58FF7 597 aa7.64□□□□□ -1.19
GTF3C3-202ENST00000409364 RTL5Q5HYW3 569 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms