RNA–Protein interactions for RNA: ENST00000407361.7

EP400NL-204, Transcript of EP400 N-terminal-like protein, human

TSL 3

Gene EP400NL, Length 945 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EP400NL-204	ENST00000407361	TCIRG1	Q13488	830 aa		27.72	■■■□□ 2.03
EP400NL-204	ENST00000407361	CCDC27	Q2M243	656 aa		27.72	■■■□□ 2.03
EP400NL-204	ENST00000407361	DPY19L2	Q6NUT2	758 aa		27.72	■■■□□ 2.03
EP400NL-204	ENST00000407361	RTKN2	Q8IZC4	609 aa		27.72	■■■□□ 2.03
EP400NL-204	ENST00000407361	RPGR	Q92834	1020 aa	Known RBP	27.72	■■■□□ 2.03
EP400NL-204	ENST00000407361	HOXA10	P31260	410 aa	Predicted RBP	27.71	■■■□□ 2.03
EP400NL-204	ENST00000407361	SLC10A5	Q5PT55	438 aa		27.71	■■■□□ 2.03
EP400NL-204	ENST00000407361	ANKRD13D	Q6ZTN6	518 aa		27.7	■■■□□ 2.02
EP400NL-204	ENST00000407361	PLBD2	Q8NHP8	589 aa		27.7	■■■□□ 2.02
EP400NL-204	ENST00000407361	NLRP3	Q96P20	1036 aa		27.7	■■■□□ 2.02
EP400NL-204	ENST00000407361	ABCC12	Q96J65	1359 aa		27.7	■■■□□ 2.02
EP400NL-204	ENST00000407361	SLX4	Q8IY92	1834 aa		27.69	■■■□□ 2.02
EP400NL-204	ENST00000407361	CC2D2B	Q6DHV5	1058 aa		27.69	■■■□□ 2.02
EP400NL-204	ENST00000407361	RBM17	Q96I25	401 aa	Known RBP	27.69	■■■□□ 2.02
EP400NL-204	ENST00000407361	RRAGC	Q9HB90	399 aa		27.69	■■■□□ 2.02
EP400NL-204	ENST00000407361	GRIPAP1	Q4V328	841 aa		27.68	■■■□□ 2.02
EP400NL-204	ENST00000407361	HSPA6	P17066	643 aa		27.67	■■■□□ 2.02
EP400NL-204	ENST00000407361	NLRP10	Q86W26	655 aa		27.67	■■■□□ 2.02
EP400NL-204	ENST00000407361	RBM46	Q8TBY0	533 aa	Known RBP	27.67	■■■□□ 2.02
EP400NL-204	ENST00000407361	CRAMP1	Q96RY5	1269 aa		27.67	■■■□□ 2.02
EP400NL-204	ENST00000407361	FKBP4	Q02790	459 aa	Known RBP eCLIP	27.66	■■■□□ 2.02
EP400NL-204	ENST00000407361	VEGFA	P15692	232 aa	Predicted RBP	27.65	■■■□□ 2.02
EP400NL-204	ENST00000407361	WWC1	Q8IX03	1113 aa		27.65	■■■□□ 2.02
EP400NL-204	ENST00000407361	TRMT112	Q9UI30	125 aa	Known RBP	27.65	■■■□□ 2.02
EP400NL-204	ENST00000407361	FER1L6	Q2WGJ9	1857 aa		27.65	■■■□□ 2.02
EP400NL-204	ENST00000407361	ARFGEF2	Q9Y6D5	1785 aa		27.65	■■■□□ 2.02
EP400NL-204	ENST00000407361	ELL2	O00472	640 aa	Predicted RBP	27.63	■■■□□ 2.01
EP400NL-204	ENST00000407361	CCDC30	Q5VVM6	783 aa		27.63	■■■□□ 2.01
EP400NL-204	ENST00000407361	SH3TC1	Q8TE82	1336 aa		27.63	■■■□□ 2.01
EP400NL-204	ENST00000407361	FSTL1	Q12841	308 aa		27.62	■■■□□ 2.01
EP400NL-204	ENST00000407361	C8orf58	Q8NAV2	365 aa		27.62	■■■□□ 2.01
EP400NL-204	ENST00000407361	TMX4	Q9H1E5	349 aa	Predicted RBP	27.62	■■■□□ 2.01
EP400NL-204	ENST00000407361	IL16	Q14005	1332 aa		27.62	■■■□□ 2.01
EP400NL-204	ENST00000407361	PSMD1	Q99460	953 aa		27.61	■■■□□ 2.01
EP400NL-204	ENST00000407361	GOLGA2	Q08379	1002 aa		27.6	■■■□□ 2.01
EP400NL-204	ENST00000407361	TRIM28	Q13263	835 aa	Known RBP	27.6	■■■□□ 2.01
EP400NL-204	ENST00000407361	ISCA1	Q9BUE6	129 aa		27.6	■■■□□ 2.01
EP400NL-204	ENST00000407361	RIC3	Q7Z5B4	369 aa		27.59	■■■□□ 2.01
EP400NL-204	ENST00000407361	SYNE4	Q8N205	404 aa		27.59	■■■□□ 2.01
EP400NL-204	ENST00000407361	OLFM4	Q6UX06	510 aa		27.58	■■■□□ 2.01
EP400NL-204	ENST00000407361	ZNF277	Q9NRM2	450 aa	Predicted RBP	27.58	■■■□□ 2.01
EP400NL-204	ENST00000407361	CCDC88A	Q3V6T2	1871 aa		27.57	■■■□□ 2
EP400NL-204	ENST00000407361	TNRC6C	Q9HCJ0	1690 aa	Known RBP	27.57	■■■□□ 2
EP400NL-204	ENST00000407361	PPEF1	O14829	653 aa	Predicted RBP	27.57	■■■□□ 2
EP400NL-204	ENST00000407361	BBOX1	O75936	387 aa		27.57	■■■□□ 2
EP400NL-204	ENST00000407361	DDX58	O95786	925 aa	Known RBP	27.57	■■■□□ 2
EP400NL-204	ENST00000407361	APLP1	P51693	650 aa		27.57	■■■□□ 2
EP400NL-204	ENST00000407361	C3orf67	Q6ZVT6	689 aa		27.57	■■■□□ 2
EP400NL-204	ENST00000407361	HCLS1	P14317	486 aa	Predicted RBP	27.56	■■■□□ 2
EP400NL-204	ENST00000407361	IARS	P41252	1262 aa	Known RBP	27.56	■■■□□ 2
EP400NL-204	ENST00000407361	WDR63	Q8IWG1	891 aa		27.56	■■■□□ 2
EP400NL-204	ENST00000407361	SMC1B	Q8NDV3	1235 aa		27.56	■■■□□ 2
EP400NL-204	ENST00000407361	CACNA1S	Q13698	1873 aa		27.55	■■■□□ 2
EP400NL-204	ENST00000407361	DDX46	Q7L014	1031 aa	Known RBP	27.55	■■■□□ 2
EP400NL-204	ENST00000407361	TSR2	Q969E8	191 aa	Known RBP	27.55	■■■□□ 2
EP400NL-204	ENST00000407361	DICER1	Q9UPY3	1922 aa	Known RBP	27.55	■■■□□ 2
EP400NL-204	ENST00000407361	ATP5J2-PTCD1	G3V325	749 aa		27.54	■■■□□ 2
EP400NL-204	ENST00000407361	HSP90B1	P14625	803 aa	Known RBP	27.54	■■■□□ 2
EP400NL-204	ENST00000407361	JDP2	Q8WYK2	163 aa		27.54	■■■□□ 2
EP400NL-204	ENST00000407361	STK31	Q9BXU1	1019 aa		27.54	■■■□□ 2
EP400NL-204	ENST00000407361	PHAX	Q9H814	394 aa	Known RBP	27.54	■■■□□ 2
EP400NL-204	ENST00000407361	ATP6V0A2	Q9Y487	856 aa		27.54	■■■□□ 2
EP400NL-204	ENST00000407361	TIAM2	Q8IVF5	1701 aa		27.53	■■■□□ 2
EP400NL-204	ENST00000407361	TSPYL6	Q8N831	410 aa		27.53	■■■□□ 2
EP400NL-204	ENST00000407361	VPS33B	Q9H267	617 aa		27.52	■■■□□ 2
EP400NL-204	ENST00000407361	ANKRD36C	Q5JPF3	1778 aa		27.52	■■■□□ 2
EP400NL-204	ENST00000407361	ABCC4	O15439	1325 aa		27.51	■■□□□ 1.99
EP400NL-204	ENST00000407361	IQCA1L	A6NCM1	817 aa		27.51	■■□□□ 1.99
EP400NL-204	ENST00000407361	POTEC	B2RU33	542 aa		27.51	■■□□□ 1.99
EP400NL-204	ENST00000407361	DDN	O94850	711 aa	Predicted RBP	27.51	■■□□□ 1.99
EP400NL-204	ENST00000407361	TWISTNB	Q3B726	338 aa	Predicted RBP	27.51	■■□□□ 1.99
EP400NL-204	ENST00000407361	TMC4	Q7Z404	712 aa		27.51	■■□□□ 1.99
EP400NL-204	ENST00000407361	FAM89A	Q96GI7	184 aa		27.51	■■□□□ 1.99
EP400NL-204	ENST00000407361	CEP350	Q5VT06	3117 aa		27.51	■■□□□ 1.99
EP400NL-204	ENST00000407361	FZD9	O00144	591 aa		27.5	■■□□□ 1.99
EP400NL-204	ENST00000407361	TCERG1	O14776	1098 aa	Known RBP	27.5	■■□□□ 1.99
EP400NL-204	ENST00000407361	SP8	Q8IXZ3	490 aa		27.5	■■□□□ 1.99
EP400NL-204	ENST00000407361	SNED1	Q8TER0	1413 aa		27.5	■■□□□ 1.99
EP400NL-204	ENST00000407361	GRAP	Q13588	217 aa		27.49	■■□□□ 1.99
EP400NL-204	ENST00000407361	SF3B3	Q15393	1217 aa	Known RBP	27.49	■■□□□ 1.99
EP400NL-204	ENST00000407361	FAM9B	Q8IZU0	186 aa		27.49	■■□□□ 1.99
EP400NL-204	ENST00000407361	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.49	■■□□□ 1.99
EP400NL-204	ENST00000407361	CCDC191	Q8NCU4	936 aa		27.49	■■□□□ 1.99
EP400NL-204	ENST00000407361	SUPT20H	Q8NEM7	779 aa		27.49	■■□□□ 1.99
EP400NL-204	ENST00000407361	GRAPL	Q8TC17	118 aa	Predicted RBP	27.49	■■□□□ 1.99
EP400NL-204	ENST00000407361	L3MBTL3	Q96JM7	780 aa	Predicted RBP	27.49	■■□□□ 1.99
EP400NL-204	ENST00000407361	WDR90	Q96KV7	1748 aa		27.48	■■□□□ 1.99
EP400NL-204	ENST00000407361	MYD88	Q99836	296 aa		27.48	■■□□□ 1.99
EP400NL-204	ENST00000407361	METTL22	Q9BUU2	404 aa	Predicted RBP	27.48	■■□□□ 1.99
EP400NL-204	ENST00000407361	IRS4	O14654	1257 aa	Predicted RBP	27.47	■■□□□ 1.99
EP400NL-204	ENST00000407361	SALL2	Q9Y467	1007 aa	Predicted RBP	27.47	■■□□□ 1.99
EP400NL-204	ENST00000407361	KSR2	Q6VAB6	950 aa		27.46	■■□□□ 1.99
EP400NL-204	ENST00000407361	LARGE2	Q8N3Y3	721 aa		27.46	■■□□□ 1.99
EP400NL-204	ENST00000407361	EIF6	P56537	245 aa	Known RBP	27.45	■■□□□ 1.98
EP400NL-204	ENST00000407361	CWC25	Q9NXE8	425 aa	Predicted RBP	27.45	■■□□□ 1.98
EP400NL-204	ENST00000407361	SLC4A2	P04920	1241 aa		27.44	■■□□□ 1.98
EP400NL-204	ENST00000407361	DPP8	Q6V1X1	898 aa	Predicted RBP	27.44	■■□□□ 1.98
EP400NL-204	ENST00000407361	GPC2	Q8N158	579 aa		27.44	■■□□□ 1.98
EP400NL-204	ENST00000407361	ZNF428	Q96B54	188 aa		27.44	■■□□□ 1.98
EP400NL-204	ENST00000407361	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.44	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms