RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 BCL2L12Q9HB09 334 aa25.7■■□□□ 1.71
CHKB-201ENST00000406938 NLRP10Q86W26 655 aa25.7■■□□□ 1.7
CHKB-201ENST00000406938 LRRFIP2Q9Y608 721 aaKnown RBP25.69■■□□□ 1.7
CHKB-201ENST00000406938 UBE3BQ7Z3V4 1068 aa25.68■■□□□ 1.7
CHKB-201ENST00000406938 UPF1Q92900 1129 aaKnown RBP eCLIP25.68■■□□□ 1.7
CHKB-201ENST00000406938 NIP7Q9Y221 180 aaKnown RBP eCLIP25.67■■□□□ 1.7
CHKB-201ENST00000406938 JARID2Q92833 1246 aaPredicted RBP25.66■■□□□ 1.7
CHKB-201ENST00000406938 STK32BQ9NY57 414 aa25.66■■□□□ 1.7
CHKB-201ENST00000406938 SLC15A2Q16348 729 aa25.66■■□□□ 1.7
CHKB-201ENST00000406938 CEP85Q6P2H3 762 aa25.66■■□□□ 1.7
CHKB-201ENST00000406938 PNPLA7Q6ZV29 1317 aa25.66■■□□□ 1.7
CHKB-201ENST00000406938 H7C1W4 665 aa25.65■■□□□ 1.7
CHKB-201ENST00000406938 CASP7P55210 303 aa25.65■■□□□ 1.7
CHKB-201ENST00000406938 TBC1D9BQ66K14 1250 aa25.65■■□□□ 1.7
CHKB-201ENST00000406938 FLAD1Q8NFF5 587 aa25.65■■□□□ 1.7
CHKB-201ENST00000406938 SUCLG2Q96I99 432 aa25.65■■□□□ 1.7
CHKB-201ENST00000406938 PARP10Q53GL7 1025 aa25.64■■□□□ 1.7
CHKB-201ENST00000406938 RTL5Q5HYW3 569 aaPredicted RBP25.64■■□□□ 1.7
CHKB-201ENST00000406938 COL23A1Q86Y22 540 aaPredicted RBP25.64■■□□□ 1.7
CHKB-201ENST00000406938 GYS1P13807 737 aa25.63■■□□□ 1.69
CHKB-201ENST00000406938 ZBTB38Q8NAP3 1195 aaPredicted RBP25.63■■□□□ 1.69
CHKB-201ENST00000406938 HDAC5Q9UQL6 1122 aa25.63■■□□□ 1.69
CHKB-201ENST00000406938 PCCAP05165 728 aaPredicted RBP25.63■■□□□ 1.69
CHKB-201ENST00000406938 SUSD4Q5VX71 490 aa25.63■■□□□ 1.69
CHKB-201ENST00000406938 BICDL1Q6ZP65 573 aa25.63■■□□□ 1.69
CHKB-201ENST00000406938 SIRT2Q8IXJ6 389 aa25.63■■□□□ 1.69
CHKB-201ENST00000406938 ANKRD44Q8N8A2 993 aa25.63■■□□□ 1.69
CHKB-201ENST00000406938 RPAP2Q8IXW5 612 aaPredicted RBP25.62■■□□□ 1.69
CHKB-201ENST00000406938 FAM89AQ96GI7 184 aa25.62■■□□□ 1.69
CHKB-201ENST00000406938 KAZALD1Q96I82 304 aa25.62■■□□□ 1.69
CHKB-201ENST00000406938 TRMT112Q9UI30 125 aaKnown RBP25.62■■□□□ 1.69
CHKB-201ENST00000406938 COL24A1Q17RW2 1714 aa25.62■■□□□ 1.69
CHKB-201ENST00000406938 QSER1Q2KHR3 1735 aa25.62■■□□□ 1.69
CHKB-201ENST00000406938 MSH5O43196 834 aa25.61■■□□□ 1.69
CHKB-201ENST00000406938 IGHDP01880 384 aa25.61■■□□□ 1.69
CHKB-201ENST00000406938 HDAC1Q13547 482 aaPredicted RBP25.61■■□□□ 1.69
CHKB-201ENST00000406938 FAM177BA6PVY3 158 aa25.6■■□□□ 1.69
CHKB-201ENST00000406938 BICC1Q9H694 974 aaKnown RBP25.6■■□□□ 1.69
CHKB-201ENST00000406938 KDM2BQ8NHM5 1336 aa25.59■■□□□ 1.69
CHKB-201ENST00000406938 NTSR2O95665 410 aa25.59■■□□□ 1.69
CHKB-201ENST00000406938 ILDR2Q71H61 639 aa25.59■■□□□ 1.69
CHKB-201ENST00000406938 PPP1R42Q7Z4L9 355 aa25.59■■□□□ 1.69
CHKB-201ENST00000406938 UTP14AQ9BVJ6 771 aaKnown RBP25.59■■□□□ 1.69
CHKB-201ENST00000406938 RWDD1Q9H446 243 aaPredicted RBP25.59■■□□□ 1.69
CHKB-201ENST00000406938 CDHR2Q9BYE9 1310 aa25.59■■□□□ 1.69
CHKB-201ENST00000406938 SETDB2Q96T68 719 aa25.59■■□□□ 1.69
CHKB-201ENST00000406938 EPHA10Q5JZY3 1008 aa25.58■■□□□ 1.69
CHKB-201ENST00000406938 SYNE4Q8N205 404 aa25.58■■□□□ 1.69
CHKB-201ENST00000406938 SH3TC1Q8TE82 1336 aa25.57■■□□□ 1.68
CHKB-201ENST00000406938 PNMA6EA0A0J9YXQ4 647 aa25.57■■□□□ 1.68
CHKB-201ENST00000406938 NFIXQ14938 502 aa25.57■■□□□ 1.68
CHKB-201ENST00000406938 CARMIL3Q8ND23 1372 aa25.57■■□□□ 1.68
CHKB-201ENST00000406938 ATP8B2P98198 1209 aa25.56■■□□□ 1.68
CHKB-201ENST00000406938 MTX1Q13505 466 aa25.56■■□□□ 1.68
CHKB-201ENST00000406938 CENPQQ7L2Z9 268 aaPredicted RBP25.56■■□□□ 1.68
CHKB-201ENST00000406938 IRS4O14654 1257 aaPredicted RBP25.55■■□□□ 1.68
CHKB-201ENST00000406938 HMMRO75330 724 aa25.55■■□□□ 1.68
CHKB-201ENST00000406938 SRGAP3O43295 1099 aa25.54■■□□□ 1.68
CHKB-201ENST00000406938 FOXO4P98177 505 aa25.54■■□□□ 1.68
CHKB-201ENST00000406938 RABL6Q3YEC7 729 aaPredicted RBP25.54■■□□□ 1.68
CHKB-201ENST00000406938 NUTM1Q86Y26 1132 aa25.54■■□□□ 1.68
CHKB-201ENST00000406938 PLA2G12BQ9BX93 195 aa25.54■■□□□ 1.68
CHKB-201ENST00000406938 NBPF5PQ86XG9 351 aaPredicted RBP25.53■■□□□ 1.68
CHKB-201ENST00000406938 NYXQ9GZU5 481 aa25.53■■□□□ 1.68
CHKB-201ENST00000406938 SSH3Q8TE77 659 aa25.52■■□□□ 1.68
CHKB-201ENST00000406938 TM4SF1P30408 202 aa25.52■■□□□ 1.68
CHKB-201ENST00000406938 POLA2Q14181 598 aa25.52■■□□□ 1.68
CHKB-201ENST00000406938 NLGN1Q8N2Q7 840 aa25.52■■□□□ 1.68
CHKB-201ENST00000406938 LAMB2P55268 1798 aa25.51■■□□□ 1.67
CHKB-201ENST00000406938 ERFEQ4G0M1 354 aa25.51■■□□□ 1.67
CHKB-201ENST00000406938 LMBR1LQ6UX01 489 aa25.51■■□□□ 1.67
CHKB-201ENST00000406938 DDX60Q8IY21 1712 aaKnown RBP25.51■■□□□ 1.67
CHKB-201ENST00000406938 ABCC12Q96J65 1359 aa25.5■■□□□ 1.67
CHKB-201ENST00000406938 HCLS1P14317 486 aaPredicted RBP25.5■■□□□ 1.67
CHKB-201ENST00000406938 PDE8AO60658 829 aa25.49■■□□□ 1.67
CHKB-201ENST00000406938 DDR1Q08345 913 aa25.49■■□□□ 1.67
CHKB-201ENST00000406938 MSL1Q68DK7 614 aa25.49■■□□□ 1.67
CHKB-201ENST00000406938 TPTE2Q6XPS3 522 aa25.49■■□□□ 1.67
CHKB-201ENST00000406938 GTF2E1P29083 439 aaPredicted RBP25.48■■□□□ 1.67
CHKB-201ENST00000406938 CTSWP56202 376 aa25.48■■□□□ 1.67
CHKB-201ENST00000406938 PDGFDQ9GZP0 370 aaPredicted RBP25.48■■□□□ 1.67
CHKB-201ENST00000406938 CHMP3Q9Y3E7 222 aa25.48■■□□□ 1.67
CHKB-201ENST00000406938 POLRMTO00411 1230 aaKnown RBP25.48■■□□□ 1.67
CHKB-201ENST00000406938 SMC5Q8IY18 1101 aa25.48■■□□□ 1.67
CHKB-201ENST00000406938 NPHP1O15259 732 aa25.47■■□□□ 1.67
CHKB-201ENST00000406938 HSP90B1P14625 803 aaKnown RBP25.47■■□□□ 1.67
CHKB-201ENST00000406938 CNBD1Q8NA66 436 aa25.47■■□□□ 1.67
CHKB-201ENST00000406938 GCC1Q96CN9 775 aa25.47■■□□□ 1.67
CHKB-201ENST00000406938 DCTPP1Q9H773 170 aa25.47■■□□□ 1.67
CHKB-201ENST00000406938 SERPINB2P05120 415 aa25.46■■□□□ 1.67
CHKB-201ENST00000406938 MYH3P11055 1940 aa25.46■■□□□ 1.67
CHKB-201ENST00000406938 CSF1RP07333 972 aa25.45■■□□□ 1.67
CHKB-201ENST00000406938 TTLL11Q8NHH1 800 aa25.45■■□□□ 1.67
CHKB-201ENST00000406938 CCDC85AQ96PX6 553 aaPredicted RBP25.45■■□□□ 1.67
CHKB-201ENST00000406938 MMP10P09238 476 aa25.45■■□□□ 1.66
CHKB-201ENST00000406938 FAM161AQ3B820 660 aa25.45■■□□□ 1.66
CHKB-201ENST00000406938 PRR5LQ6MZQ0 368 aa25.45■■□□□ 1.66
CHKB-201ENST00000406938 CCDC24Q8N4L8 307 aa25.45■■□□□ 1.66
CHKB-201ENST00000406938 EXOC6BQ9Y2D4 811 aa25.45■■□□□ 1.66
CHKB-201ENST00000406938 RFX5P48382 616 aaPredicted RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms