RNA–Protein interactions for RNA: ENST00000406854.5

PCNX4-203, Transcript of pecanex 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCNX4, Length 4,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-203ENST00000406854 RAPGEF6Q8TEU7 1601 aa16.87■□□□□ 0.29
PCNX4-203ENST00000406854 ANKRD18BA2A2Z9 1011 aa16.87■□□□□ 0.29
PCNX4-203ENST00000406854 SPDYE4A6NLX3 237 aa16.87■□□□□ 0.29
PCNX4-203ENST00000406854 USP5P45974 858 aa16.87■□□□□ 0.29
PCNX4-203ENST00000406854 NCOA7Q8NI08 942 aa16.87■□□□□ 0.29
PCNX4-203ENST00000406854 MAP9Q49MG5 647 aa16.87■□□□□ 0.29
PCNX4-203ENST00000406854 RAB11FIP4Q86YS3 637 aa16.87■□□□□ 0.29
PCNX4-203ENST00000406854 ZRANB1Q9UGI0 708 aa16.87■□□□□ 0.29
PCNX4-203ENST00000406854 DENND4BO75064 1496 aaPredicted RBP16.86■□□□□ 0.29
PCNX4-203ENST00000406854 ALDH1L1O75891 902 aa16.86■□□□□ 0.29
PCNX4-203ENST00000406854 HSP90AB3PQ58FF7 597 aa16.86■□□□□ 0.29
PCNX4-203ENST00000406854 IFNL2Q8IZJ0 200 aa16.86■□□□□ 0.29
PCNX4-203ENST00000406854 MKNK2Q9HBH9 465 aa16.86■□□□□ 0.29
PCNX4-203ENST00000406854 CWC25Q9NXE8 425 aaPredicted RBP16.86■□□□□ 0.29
PCNX4-203ENST00000406854 SKILP12757 684 aa16.86■□□□□ 0.29
PCNX4-203ENST00000406854 FKBP15Q5T1M5 1219 aa16.86■□□□□ 0.29
PCNX4-203ENST00000406854 TMEM67Q5HYA8 995 aa16.86■□□□□ 0.29
PCNX4-203ENST00000406854 NUP88Q99567 741 aaPredicted RBP16.86■□□□□ 0.29
PCNX4-203ENST00000406854 GOLGA6L9A6NEM1 432 aa16.85■□□□□ 0.29
PCNX4-203ENST00000406854 SLC5A1P13866 664 aa16.85■□□□□ 0.29
PCNX4-203ENST00000406854 CCDC150Q8NCX0 1101 aa16.85■□□□□ 0.29
PCNX4-203ENST00000406854 CEBPAP49715 358 aaPredicted RBP16.85■□□□□ 0.29
PCNX4-203ENST00000406854 METAP2P50579 478 aaKnown RBP eCLIP16.85■□□□□ 0.29
PCNX4-203ENST00000406854 CCDC144CPQ8IYA2 1237 aa16.85■□□□□ 0.29
PCNX4-203ENST00000406854 GRM8O00222 908 aa16.85■□□□□ 0.29
PCNX4-203ENST00000406854 ZNF287Q9HBT7 754 aa16.85■□□□□ 0.29
PCNX4-203ENST00000406854 SNRPA1P09661 255 aaKnown RBP16.85■□□□□ 0.29
PCNX4-203ENST00000406854 NEFHP12036 1026 aa16.85■□□□□ 0.29
PCNX4-203ENST00000406854 CCDC171Q6TFL3 1326 aa16.85■□□□□ 0.29
PCNX4-203ENST00000406854 NPHP3Q7Z494 1330 aa16.85■□□□□ 0.29
PCNX4-203ENST00000406854 COL17A1Q9UMD9 1497 aaPredicted RBP16.84■□□□□ 0.29
PCNX4-203ENST00000406854 KLF18A0A0U1RQI7 1052 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 GPTP24298 496 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 AK2P54819 239 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 GNG11P61952 73 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 SEPT11Q9NVA2 429 aaKnown RBP16.84■□□□□ 0.29
PCNX4-203ENST00000406854 YEATS4O95619 227 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 CHMLP26374 656 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 SYKP43405 635 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 DNAJC25Q9H1X3 360 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 TMX1Q9H3N1 280 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 USP8P40818 1118 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 BMS1Q14692 1282 aaKnown RBP16.84■□□□□ 0.29
PCNX4-203ENST00000406854 CACNA2D4Q7Z3S7 1137 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 TAX1BP1Q86VP1 789 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 DMRT2Q9Y5R5 561 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 NPC1L1Q9UHC9 1359 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 CCDC194A0A1B0GVG4 234 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 MTHFSDQ2M296 383 aaKnown RBP16.84■□□□□ 0.29
PCNX4-203ENST00000406854 CALCOCO1Q9P1Z2 691 aa16.84■□□□□ 0.29
PCNX4-203ENST00000406854 NLRP5P59047 1200 aa16.83■□□□□ 0.29
PCNX4-203ENST00000406854 TTF1Q15361 905 aaPredicted RBP16.83■□□□□ 0.29
PCNX4-203ENST00000406854 KSR2Q6VAB6 950 aa16.83■□□□□ 0.29
PCNX4-203ENST00000406854 TTC21AQ8NDW8 1320 aa16.83■□□□□ 0.29
PCNX4-203ENST00000406854 SYCP2Q9BX26 1530 aa16.83■□□□□ 0.29
PCNX4-203ENST00000406854 PZPP20742 1482 aa16.83■□□□□ 0.28
PCNX4-203ENST00000406854 KCNG4Q8TDN1 519 aa16.83■□□□□ 0.28
PCNX4-203ENST00000406854 MRPS27Q92552 414 aaKnown RBP16.83■□□□□ 0.28
PCNX4-203ENST00000406854 CATIPQ7Z7H3 387 aa16.83■□□□□ 0.28
PCNX4-203ENST00000406854 ZSCAN29Q8IWY8 852 aaPredicted RBP16.83■□□□□ 0.28
PCNX4-203ENST00000406854 SEC63Q9UGP8 760 aaKnown RBP16.83■□□□□ 0.28
PCNX4-203ENST00000406854 ZNF652Q9Y2D9 606 aa16.83■□□□□ 0.28
PCNX4-203ENST00000406854 COPS6Q7L5N1 327 aa16.82■□□□□ 0.28
PCNX4-203ENST00000406854 PA2G4Q9UQ80 394 aaKnown RBP16.82■□□□□ 0.28
PCNX4-203ENST00000406854 UHRF1BP1Q6BDS2 1440 aa16.82■□□□□ 0.28
PCNX4-203ENST00000406854 MCM3P25205 808 aa16.82■□□□□ 0.28
PCNX4-203ENST00000406854 PAFAH1B1P43034 410 aa16.82■□□□□ 0.28
PCNX4-203ENST00000406854 TYRO3Q06418 890 aa16.82■□□□□ 0.28
PCNX4-203ENST00000406854 MCMDC2Q4G0Z9 681 aa16.82■□□□□ 0.28
PCNX4-203ENST00000406854 XAGE3Q8WTP9 111 aa16.82■□□□□ 0.28
PCNX4-203ENST00000406854 SLC26A6Q9BXS9 759 aa16.82■□□□□ 0.28
PCNX4-203ENST00000406854 TTC41PQ6P2S7 1318 aa16.82■□□□□ 0.28
PCNX4-203ENST00000406854 UBASH3AP57075 661 aa16.82■□□□□ 0.28
PCNX4-203ENST00000406854 KANK3Q6NY19 840 aa16.82■□□□□ 0.28
PCNX4-203ENST00000406854 ANKRD24Q8TF21 1146 aa16.82■□□□□ 0.28
PCNX4-203ENST00000406854 GOLGA6L7A0A1B0GV03 622 aa16.82■□□□□ 0.28
PCNX4-203ENST00000406854 Q6ZUG5 572 aa16.82■□□□□ 0.28
PCNX4-203ENST00000406854 ZHX1Q9UKY1 873 aaPredicted RBP16.82■□□□□ 0.28
PCNX4-203ENST00000406854 USO1O60763 962 aaKnown RBP16.81■□□□□ 0.28
PCNX4-203ENST00000406854 LINS1Q8NG48 757 aa16.81■□□□□ 0.28
PCNX4-203ENST00000406854 PPIP5K1Q6PFW1 1433 aa16.81■□□□□ 0.28
PCNX4-203ENST00000406854 ZMYND15Q9H091 742 aa16.81■□□□□ 0.28
PCNX4-203ENST00000406854 ITSN2Q9NZM3 1697 aa16.81■□□□□ 0.28
PCNX4-203ENST00000406854 SOS1Q07889 1333 aaPredicted RBP16.81■□□□□ 0.28
PCNX4-203ENST00000406854 ZFYP08048 801 aaPredicted RBP16.81■□□□□ 0.28
PCNX4-203ENST00000406854 ZNF76P36508 570 aa16.81■□□□□ 0.28
PCNX4-203ENST00000406854 NMIQ13287 307 aaPredicted RBP16.81■□□□□ 0.28
PCNX4-203ENST00000406854 NUTM2BA6NNL0 878 aaPredicted RBP16.8■□□□□ 0.28
PCNX4-203ENST00000406854 NUTM2EB1AL46 878 aaPredicted RBP16.8■□□□□ 0.28
PCNX4-203ENST00000406854 SYT1P21579 422 aa16.8■□□□□ 0.28
PCNX4-203ENST00000406854 GTF2F1P35269 517 aaKnown RBP eCLIP16.8■□□□□ 0.28
PCNX4-203ENST00000406854 TMEM132AQ24JP5 1023 aa16.8■□□□□ 0.28
PCNX4-203ENST00000406854 MFSD6Q6ZSS7 791 aa16.8■□□□□ 0.28
PCNX4-203ENST00000406854 NUTM2AQ8IVF1 878 aaPredicted RBP16.8■□□□□ 0.28
PCNX4-203ENST00000406854 RAB34Q9BZG1 259 aa16.8■□□□□ 0.28
PCNX4-203ENST00000406854 ZSWIM4Q9H7M6 989 aa16.8■□□□□ 0.28
PCNX4-203ENST00000406854 EIF2AK4Q9P2K8 1649 aaKnown RBP16.8■□□□□ 0.28
PCNX4-203ENST00000406854 RBM5P52756 815 aaKnown RBP eCLIP16.8■□□□□ 0.28
PCNX4-203ENST00000406854 LMBR1LQ6UX01 489 aa16.8■□□□□ 0.28
PCNX4-203ENST00000406854 CCDC12Q8WUD4 166 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms