RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 RBM27Q9P2N5 1060 aaKnown RBP18.46■□□□□ 0.55
LIMK2-204ENST00000406516 CACNA1FO60840 1977 aa18.46■□□□□ 0.55
LIMK2-204ENST00000406516 MCM2P49736 904 aa18.45■□□□□ 0.54
LIMK2-204ENST00000406516 CCDC173Q0VFZ6 552 aa18.45■□□□□ 0.54
LIMK2-204ENST00000406516 ANP32BQ92688 251 aaKnown RBP18.45■□□□□ 0.54
LIMK2-204ENST00000406516 UPF3BQ9BZI7 483 aaKnown RBP18.45■□□□□ 0.54
LIMK2-204ENST00000406516 IL25Q9H293 177 aa18.45■□□□□ 0.54
LIMK2-204ENST00000406516 EN1Q05925 392 aaPredicted RBP18.45■□□□□ 0.54
LIMK2-204ENST00000406516 ZNF496Q96IT1 587 aaPredicted RBP18.45■□□□□ 0.54
LIMK2-204ENST00000406516 PALLDQ8WX93 1383 aa18.44■□□□□ 0.54
LIMK2-204ENST00000406516 SF3B2Q13435 895 aaKnown RBP18.44■□□□□ 0.54
LIMK2-204ENST00000406516 PROM2Q8N271 834 aa18.44■□□□□ 0.54
LIMK2-204ENST00000406516 SLC4A9Q96Q91 983 aa18.44■□□□□ 0.54
LIMK2-204ENST00000406516 BTAF1O14981 1849 aa18.44■□□□□ 0.54
LIMK2-204ENST00000406516 SRGAP3O43295 1099 aa18.44■□□□□ 0.54
LIMK2-204ENST00000406516 ANAPC15P60006 121 aa18.44■□□□□ 0.54
LIMK2-204ENST00000406516 TTC5Q8N0Z6 440 aa18.44■□□□□ 0.54
LIMK2-204ENST00000406516 CHPF2Q9P2E5 772 aa18.44■□□□□ 0.54
LIMK2-204ENST00000406516 N4BP2Q86UW6 1770 aaPredicted RBP18.43■□□□□ 0.54
LIMK2-204ENST00000406516 NBPF7P0C2Y1 421 aaPredicted RBP18.43■□□□□ 0.54
LIMK2-204ENST00000406516 SIPA1L3O60292 1781 aaPredicted RBP18.43■□□□□ 0.54
LIMK2-204ENST00000406516 PLSCR1O15162 318 aa18.43■□□□□ 0.54
LIMK2-204ENST00000406516 SMARCC1Q92922 1105 aaPredicted RBP18.43■□□□□ 0.54
LIMK2-204ENST00000406516 AOX1Q06278 1338 aa18.42■□□□□ 0.54
LIMK2-204ENST00000406516 ANXA1P04083 346 aa18.42■□□□□ 0.54
LIMK2-204ENST00000406516 EIF4A1P60842 406 aaKnown RBP18.42■□□□□ 0.54
LIMK2-204ENST00000406516 CUL4AQ13619 759 aa18.42■□□□□ 0.54
LIMK2-204ENST00000406516 CCDC125Q86Z20 511 aa18.42■□□□□ 0.54
LIMK2-204ENST00000406516 PPP1R9BQ96SB3 815 aa18.42■□□□□ 0.54
LIMK2-204ENST00000406516 EZH2Q15910 746 aaKnown RBP18.42■□□□□ 0.54
LIMK2-204ENST00000406516 RHPN1Q8TCX5 695 aa18.42■□□□□ 0.54
LIMK2-204ENST00000406516 LOC102724428A0A0B4J2F2 783 aa18.41■□□□□ 0.54
LIMK2-204ENST00000406516 PI4KAP2A4QPH2 592 aa18.41■□□□□ 0.54
LIMK2-204ENST00000406516 RAB11FIP3O75154 756 aa18.41■□□□□ 0.54
LIMK2-204ENST00000406516 SIK1P57059 783 aa18.41■□□□□ 0.54
LIMK2-204ENST00000406516 POLA2Q14181 598 aa18.41■□□□□ 0.54
LIMK2-204ENST00000406516 PI4KAP1Q8N8J0 262 aa18.41■□□□□ 0.54
LIMK2-204ENST00000406516 NSFL1CQ9UNZ2 370 aaKnown RBP18.41■□□□□ 0.54
LIMK2-204ENST00000406516 PRAMEF22A3QJZ6 481 aa18.41■□□□□ 0.54
LIMK2-204ENST00000406516 CAMKK2Q96RR4 588 aa18.41■□□□□ 0.54
LIMK2-204ENST00000406516 RBSNQ9H1K0 784 aa18.41■□□□□ 0.54
LIMK2-204ENST00000406516 LRRC4BQ9NT99 713 aa18.41■□□□□ 0.54
LIMK2-204ENST00000406516 TNS1Q9HBL0 1735 aaKnown RBP18.4■□□□□ 0.54
LIMK2-204ENST00000406516 BRD1O95696 1058 aa18.4■□□□□ 0.54
LIMK2-204ENST00000406516 BAG6P46379 1132 aa18.4■□□□□ 0.54
LIMK2-204ENST00000406516 TXNRD1Q16881 649 aa18.4■□□□□ 0.54
LIMK2-204ENST00000406516 DNAAF4Q8WXU2 420 aa18.4■□□□□ 0.54
LIMK2-204ENST00000406516 TMEM63CQ9P1W3 806 aa18.4■□□□□ 0.54
LIMK2-204ENST00000406516 PI4K2BQ8TCG2 481 aa18.39■□□□□ 0.54
LIMK2-204ENST00000406516 ATP6V1AP38606 617 aa18.39■□□□□ 0.53
LIMK2-204ENST00000406516 FOXD4L6Q3SYB3 417 aaPredicted RBP18.39■□□□□ 0.53
LIMK2-204ENST00000406516 BEND3Q5T5X7 828 aa18.39■□□□□ 0.53
LIMK2-204ENST00000406516 FOXD4L3Q6VB84 417 aaPredicted RBP18.39■□□□□ 0.53
LIMK2-204ENST00000406516 KIF1BPQ96EK5 621 aa18.39■□□□□ 0.53
LIMK2-204ENST00000406516 FMNL2Q96PY5 1086 aa18.39■□□□□ 0.53
LIMK2-204ENST00000406516 ITPK1Q13572 414 aa18.38■□□□□ 0.53
LIMK2-204ENST00000406516 CCNL1Q9UK58 526 aaPredicted RBP18.38■□□□□ 0.53
LIMK2-204ENST00000406516 KCPQ6ZWJ8 1503 aa18.38■□□□□ 0.53
LIMK2-204ENST00000406516 HSPA4P34932 840 aa18.38■□□□□ 0.53
LIMK2-204ENST00000406516 INTS4Q96HW7 963 aaKnown RBP18.38■□□□□ 0.53
LIMK2-204ENST00000406516 SYCE3A1L190 88 aa18.37■□□□□ 0.53
LIMK2-204ENST00000406516 DNAJC10Q8IXB1 793 aa18.37■□□□□ 0.53
LIMK2-204ENST00000406516 HEG1Q9ULI3 1381 aa18.37■□□□□ 0.53
LIMK2-204ENST00000406516 OS9Q13438 667 aaPredicted RBP18.36■□□□□ 0.53
LIMK2-204ENST00000406516 PAPPAQ13219 1627 aa18.36■□□□□ 0.53
LIMK2-204ENST00000406516 GIGYF1O75420 1035 aaPredicted RBP18.36■□□□□ 0.53
LIMK2-204ENST00000406516 USP16Q9Y5T5 823 aa18.36■□□□□ 0.53
LIMK2-204ENST00000406516 SGSM2O43147 1006 aa18.36■□□□□ 0.53
LIMK2-204ENST00000406516 HOXB7P09629 217 aa18.36■□□□□ 0.53
LIMK2-204ENST00000406516 IL17RAQ96F46 866 aa18.36■□□□□ 0.53
LIMK2-204ENST00000406516 KDM3BQ7LBC6 1761 aa18.35■□□□□ 0.53
LIMK2-204ENST00000406516 ADCY9O60503 1353 aa18.35■□□□□ 0.53
LIMK2-204ENST00000406516 RAD50Q92878 1312 aa18.35■□□□□ 0.53
LIMK2-204ENST00000406516 CNTROBQ8N137 903 aa18.35■□□□□ 0.53
LIMK2-204ENST00000406516 MBD3O95983 291 aa18.35■□□□□ 0.53
LIMK2-204ENST00000406516 SNRPA1P09661 255 aaKnown RBP18.35■□□□□ 0.53
LIMK2-204ENST00000406516 LRSAM1Q6UWE0 723 aa18.34■□□□□ 0.53
LIMK2-204ENST00000406516 CWC27Q6UX04 472 aaKnown RBP18.34■□□□□ 0.53
LIMK2-204ENST00000406516 VSIG10Q8N0Z9 540 aa18.34■□□□□ 0.53
LIMK2-204ENST00000406516 SLC27A3Q5K4L6 730 aa18.34■□□□□ 0.53
LIMK2-204ENST00000406516 ZSCAN30Q86W11 494 aa18.34■□□□□ 0.53
LIMK2-204ENST00000406516 LINC00116Q8NCU8 138 aa18.34■□□□□ 0.53
LIMK2-204ENST00000406516 GDPD2Q9HCC8 539 aa18.33■□□□□ 0.53
LIMK2-204ENST00000406516 SNX14Q9Y5W7 946 aa18.33■□□□□ 0.53
LIMK2-204ENST00000406516 LARP6Q9BRS8 491 aaKnown RBP18.33■□□□□ 0.52
LIMK2-204ENST00000406516 LSG1Q9H089 658 aaKnown RBP18.33■□□□□ 0.52
LIMK2-204ENST00000406516 UBR2Q8IWV8 1755 aa18.32■□□□□ 0.52
LIMK2-204ENST00000406516 EPB41L2O43491 1005 aaKnown RBP18.32■□□□□ 0.52
LIMK2-204ENST00000406516 HSP90AB4PQ58FF6 505 aa18.32■□□□□ 0.52
LIMK2-204ENST00000406516 RASEFQ8IZ41 740 aa18.32■□□□□ 0.52
LIMK2-204ENST00000406516 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
LIMK2-204ENST00000406516 MAP3K2Q9Y2U5 619 aa18.32■□□□□ 0.52
LIMK2-204ENST00000406516 LY75O60449 1722 aa18.32■□□□□ 0.52
LIMK2-204ENST00000406516 CYP19A1P11511 503 aaPredicted RBP18.31■□□□□ 0.52
LIMK2-204ENST00000406516 PROSER3Q2NL68 480 aa18.31■□□□□ 0.52
LIMK2-204ENST00000406516 KIAA1211Q6ZU35 1233 aa18.31■□□□□ 0.52
LIMK2-204ENST00000406516 C9orf78Q9NZ63 289 aaPredicted RBP18.31■□□□□ 0.52
LIMK2-204ENST00000406516 DBF4Q9UBU7 674 aaPredicted RBP18.31■□□□□ 0.52
LIMK2-204ENST00000406516 MSNP26038 577 aaKnown RBP18.31■□□□□ 0.52
LIMK2-204ENST00000406516 RNF214Q8ND24 703 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms