RNA–Protein interactions for RNA: ENST00000403506.1

CLHC1-202, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 5

Gene CLHC1, Length 430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-202ENST00000403506 ZNF428Q96B54 188 aa14.03□□□□□ -0.16
CLHC1-202ENST00000403506 NYXQ9GZU5 481 aa14.03□□□□□ -0.16
CLHC1-202ENST00000403506 NUP98P52948 1817 aa14.03□□□□□ -0.16
CLHC1-202ENST00000403506 SLX4Q8IY92 1834 aa14.03□□□□□ -0.16
CLHC1-202ENST00000403506 LMNB1P20700 586 aa14.02□□□□□ -0.17
CLHC1-202ENST00000403506 NLRP10Q86W26 655 aa14.02□□□□□ -0.17
CLHC1-202ENST00000403506 SYNE4Q8N205 404 aa14.02□□□□□ -0.17
CLHC1-202ENST00000403506 STK31Q9BXU1 1019 aa14.02□□□□□ -0.17
CLHC1-202ENST00000403506 RIC1Q4ADV7 1423 aa14.01□□□□□ -0.17
CLHC1-202ENST00000403506 TCIRG1Q13488 830 aa14.01□□□□□ -0.17
CLHC1-202ENST00000403506 PARP10Q53GL7 1025 aa14.01□□□□□ -0.17
CLHC1-202ENST00000403506 CEP350Q5VT06 3117 aa14.01□□□□□ -0.17
CLHC1-202ENST00000403506 RNF123Q5XPI4 1314 aa14□□□□□ -0.17
CLHC1-202ENST00000403506 PLBD2Q8NHP8 589 aa14□□□□□ -0.17
CLHC1-202ENST00000403506 UTP14AQ9BVJ6 771 aaKnown RBP14□□□□□ -0.17
CLHC1-202ENST00000403506 PHAXQ9H814 394 aaKnown RBP14□□□□□ -0.17
CLHC1-202ENST00000403506 SBF1O95248 1867 aa13.99□□□□□ -0.17
CLHC1-202ENST00000403506 LTBP3Q9NS15 1303 aa13.99□□□□□ -0.17
CLHC1-202ENST00000403506 DDX58O95786 925 aaKnown RBP13.99□□□□□ -0.17
CLHC1-202ENST00000403506 TWISTNBQ3B726 338 aaPredicted RBP13.99□□□□□ -0.17
CLHC1-202ENST00000403506 ANKRD13DQ6ZTN6 518 aa13.99□□□□□ -0.17
CLHC1-202ENST00000403506 PPP1R42Q7Z4L9 355 aa13.99□□□□□ -0.17
CLHC1-202ENST00000403506 TAOK3Q9H2K8 898 aa13.99□□□□□ -0.17
CLHC1-202ENST00000403506 SALL2Q9Y467 1007 aaPredicted RBP13.99□□□□□ -0.17
CLHC1-202ENST00000403506 SNED1Q8TER0 1413 aa13.98□□□□□ -0.17
CLHC1-202ENST00000403506 E9PSI1 815 aa13.98□□□□□ -0.17
CLHC1-202ENST00000403506 ATP5J2-PTCD1G3V325 749 aa13.98□□□□□ -0.17
CLHC1-202ENST00000403506 HCLS1P14317 486 aaPredicted RBP13.98□□□□□ -0.17
CLHC1-202ENST00000403506 HOXA10P31260 410 aaPredicted RBP13.98□□□□□ -0.17
CLHC1-202ENST00000403506 SLC10A5Q5PT55 438 aa13.98□□□□□ -0.17
CLHC1-202ENST00000403506 ISCA1Q9BUE6 129 aa13.98□□□□□ -0.17
CLHC1-202ENST00000403506 ARFGEF2Q9Y6D5 1785 aa13.98□□□□□ -0.17
CLHC1-202ENST00000403506 FER1L6Q2WGJ9 1857 aa13.97□□□□□ -0.17
CLHC1-202ENST00000403506 ZNF521Q96K83 1311 aa13.97□□□□□ -0.17
CLHC1-202ENST00000403506 FANCIQ9NVI1 1328 aa13.97□□□□□ -0.17
CLHC1-202ENST00000403506 ZC3H4Q9UPT8 1303 aaKnown RBP13.97□□□□□ -0.17
CLHC1-202ENST00000403506 HSP90B1P14625 803 aaKnown RBP13.97□□□□□ -0.17
CLHC1-202ENST00000403506 CCDC93Q567U6 631 aa13.97□□□□□ -0.17
CLHC1-202ENST00000403506 SPINK5Q9NQ38 1064 aaPredicted RBP13.97□□□□□ -0.17
CLHC1-202ENST00000403506 TRMT112Q9UI30 125 aaKnown RBP13.97□□□□□ -0.17
CLHC1-202ENST00000403506 TCERG1O14776 1098 aaKnown RBP13.96□□□□□ -0.17
CLHC1-202ENST00000403506 ALDH1B1P30837 517 aa13.96□□□□□ -0.17
CLHC1-202ENST00000403506 SOGA3Q5TF21 947 aa13.96□□□□□ -0.17
CLHC1-202ENST00000403506 MIER1Q8N108 512 aa13.96□□□□□ -0.17
CLHC1-202ENST00000403506 RPGRQ92834 1020 aaKnown RBP13.96□□□□□ -0.17
CLHC1-202ENST00000403506 RRAGCQ9HB90 399 aa13.96□□□□□ -0.17
CLHC1-202ENST00000403506 ZNF277Q9NRM2 450 aaPredicted RBP13.96□□□□□ -0.17
CLHC1-202ENST00000403506 CACNA1SQ13698 1873 aa13.95□□□□□ -0.18
CLHC1-202ENST00000403506 KDM2BQ8NHM5 1336 aa13.95□□□□□ -0.18
CLHC1-202ENST00000403506 GLTPD2A6NH11 291 aa13.95□□□□□ -0.18
CLHC1-202ENST00000403506 FKBP4Q02790 459 aaKnown RBP eCLIP13.95□□□□□ -0.18
CLHC1-202ENST00000403506 RBM17Q96I25 401 aaKnown RBP13.95□□□□□ -0.18
CLHC1-202ENST00000403506 CRAMP1Q96RY5 1269 aa13.95□□□□□ -0.18
CLHC1-202ENST00000403506 TIAM2Q8IVF5 1701 aa13.95□□□□□ -0.18
CLHC1-202ENST00000403506 SH3TC1Q8TE82 1336 aa13.94□□□□□ -0.18
CLHC1-202ENST00000403506 ANKRD36CQ5JPF3 1778 aa13.94□□□□□ -0.18
CLHC1-202ENST00000403506 POTECB2RU33 542 aa13.94□□□□□ -0.18
CLHC1-202ENST00000403506 CT47B1P0C2W7 299 aaPredicted RBP13.94□□□□□ -0.18
CLHC1-202ENST00000403506 NLRP3Q96P20 1036 aa13.94□□□□□ -0.18
CLHC1-202ENST00000403506 ABCC4O15439 1325 aa13.93□□□□□ -0.18
CLHC1-202ENST00000403506 PPEF1O14829 653 aaPredicted RBP13.93□□□□□ -0.18
CLHC1-202ENST00000403506 TOMM70O94826 608 aa13.93□□□□□ -0.18
CLHC1-202ENST00000403506 TRIM28Q13263 835 aaKnown RBP13.93□□□□□ -0.18
CLHC1-202ENST00000403506 RTL5Q5HYW3 569 aaPredicted RBP13.93□□□□□ -0.18
CLHC1-202ENST00000403506 G2E3Q7L622 706 aa13.93□□□□□ -0.18
CLHC1-202ENST00000403506 RIC3Q7Z5B4 369 aa13.93□□□□□ -0.18
CLHC1-202ENST00000403506 RTKN2Q8IZC4 609 aa13.93□□□□□ -0.18
CLHC1-202ENST00000403506 FAM89AQ96GI7 184 aa13.93□□□□□ -0.18
CLHC1-202ENST00000403506 COL4A5P29400 1685 aa13.93□□□□□ -0.18
CLHC1-202ENST00000403506 NEXNQ0ZGT2 675 aa13.92□□□□□ -0.18
CLHC1-202ENST00000403506 MYD88Q99836 296 aa13.92□□□□□ -0.18
CLHC1-202ENST00000403506 CACNA1FO60840 1977 aa13.92□□□□□ -0.18
CLHC1-202ENST00000403506 COL4A1P02462 1669 aa13.91□□□□□ -0.18
CLHC1-202ENST00000403506 ZNF541Q9H0D2 1346 aa13.91□□□□□ -0.18
CLHC1-202ENST00000403506 VAMP4O75379 141 aa13.91□□□□□ -0.18
CLHC1-202ENST00000403506 DDNO94850 711 aaPredicted RBP13.91□□□□□ -0.18
CLHC1-202ENST00000403506 SLC4A2P04920 1241 aa13.91□□□□□ -0.18
CLHC1-202ENST00000403506 EXOSC9Q06265 439 aaKnown RBP13.91□□□□□ -0.18
CLHC1-202ENST00000403506 JARID2Q92833 1246 aaPredicted RBP13.91□□□□□ -0.18
CLHC1-202ENST00000403506 PSMD1Q99460 953 aa13.91□□□□□ -0.18
CLHC1-202ENST00000403506 ATP6V0A2Q9Y487 856 aa13.91□□□□□ -0.18
CLHC1-202ENST00000403506 HSPA6P17066 643 aa13.9□□□□□ -0.18
CLHC1-202ENST00000403506 IARSP41252 1262 aaKnown RBP13.9□□□□□ -0.18
CLHC1-202ENST00000403506 RBM46Q8TBY0 533 aaKnown RBP13.9□□□□□ -0.18
CLHC1-202ENST00000403506 METTL22Q9BUU2 404 aaPredicted RBP13.9□□□□□ -0.18
CLHC1-202ENST00000403506 MAP3K2Q9Y2U5 619 aa13.9□□□□□ -0.18
CLHC1-202ENST00000403506 CCDC88AQ3V6T2 1871 aa13.89□□□□□ -0.19
CLHC1-202ENST00000403506 LAMB2P55268 1798 aa13.89□□□□□ -0.19
CLHC1-202ENST00000403506 PI4KAP2A4QPH2 592 aa13.89□□□□□ -0.19
CLHC1-202ENST00000403506 IRS4O14654 1257 aaPredicted RBP13.89□□□□□ -0.19
CLHC1-202ENST00000403506 IGKV5-2P06315 115 aa13.89□□□□□ -0.19
CLHC1-202ENST00000403506 VEGFAP15692 232 aaPredicted RBP13.89□□□□□ -0.19
CLHC1-202ENST00000403506 SLFN5Q08AF3 891 aa13.89□□□□□ -0.19
CLHC1-202ENST00000403506 GRIPAP1Q4V328 841 aa13.89□□□□□ -0.19
CLHC1-202ENST00000403506 CC2D2BQ6DHV5 1058 aa13.89□□□□□ -0.19
CLHC1-202ENST00000403506 KSR2Q6VAB6 950 aa13.89□□□□□ -0.19
CLHC1-202ENST00000403506 PI4KAP1Q8N8J0 262 aa13.89□□□□□ -0.19
CLHC1-202ENST00000403506 CCDC191Q8NCU4 936 aa13.89□□□□□ -0.19
CLHC1-202ENST00000403506 DDX60Q8IY21 1712 aaKnown RBP13.89□□□□□ -0.19
CLHC1-202ENST00000403506 FZD9O00144 591 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms