RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
RERE-204ENST00000400908 CCT4P50991 539 aaKnown RBP15.9■□□□□ 0.14
RERE-204ENST00000400908 PLVAPQ9BX97 442 aa15.9■□□□□ 0.14
RERE-204ENST00000400908 SIL1Q9H173 461 aa15.9■□□□□ 0.14
RERE-204ENST00000400908 MCM5P33992 734 aa15.89■□□□□ 0.13
RERE-204ENST00000400908 TMEM266Q2M3C6 531 aa15.89■□□□□ 0.13
RERE-204ENST00000400908 CCDC12Q8WUD4 166 aaPredicted RBP15.89■□□□□ 0.13
RERE-204ENST00000400908 CEP135Q66GS9 1140 aa15.89■□□□□ 0.13
RERE-204ENST00000400908 ATF7IPQ6VMQ6 1270 aa15.89■□□□□ 0.13
RERE-204ENST00000400908 TMC6Q7Z403 805 aa15.89■□□□□ 0.13
RERE-204ENST00000400908 GBP6Q6ZN66 633 aa15.89■□□□□ 0.13
RERE-204ENST00000400908 TTC16Q8NEE8 873 aa15.89■□□□□ 0.13
RERE-204ENST00000400908 TMEM87AQ8NBN3 555 aa15.89■□□□□ 0.13
RERE-204ENST00000400908 SARNPP82979 210 aaKnown RBP15.89■□□□□ 0.13
RERE-204ENST00000400908 TTC36A6NLP5 189 aa15.88■□□□□ 0.13
RERE-204ENST00000400908 OTUD6BQ8N6M0 293 aa15.88■□□□□ 0.13
RERE-204ENST00000400908 PRIMPOLQ96LW4 560 aa15.88■□□□□ 0.13
RERE-204ENST00000400908 MVPQ14764 893 aaKnown RBP15.88■□□□□ 0.13
RERE-204ENST00000400908 NAA25Q14CX7 972 aa15.88■□□□□ 0.13
RERE-204ENST00000400908 RASAL2Q9UJF2 1139 aa15.88■□□□□ 0.13
RERE-204ENST00000400908 NFE2L2Q16236 605 aa15.88■□□□□ 0.13
RERE-204ENST00000400908 CCDC171Q6TFL3 1326 aa15.88■□□□□ 0.13
RERE-204ENST00000400908 DNMT1P26358 1616 aaKnown RBP15.88■□□□□ 0.13
RERE-204ENST00000400908 CASQ2O14958 399 aaPredicted RBP15.88■□□□□ 0.13
RERE-204ENST00000400908 A2MP01023 1474 aa15.88■□□□□ 0.13
RERE-204ENST00000400908 CCDC40Q4G0X9 1142 aa15.88■□□□□ 0.13
RERE-204ENST00000400908 SAMD9Q5K651 1589 aa15.88■□□□□ 0.13
RERE-204ENST00000400908 MPHOSPH8Q99549 860 aa15.88■□□□□ 0.13
RERE-204ENST00000400908 RBM42Q9BTD8 480 aaKnown RBP15.88■□□□□ 0.13
RERE-204ENST00000400908 PRAG1Q86YV5 1406 aa15.87■□□□□ 0.13
RERE-204ENST00000400908 PRC1O43663 620 aa15.87■□□□□ 0.13
RERE-204ENST00000400908 AACSQ86V21 672 aa15.87■□□□□ 0.13
RERE-204ENST00000400908 LUC7L2Q9Y383 392 aaKnown RBP15.87■□□□□ 0.13
RERE-204ENST00000400908 SHANK2Q9UPX8 1470 aa15.87■□□□□ 0.13
RERE-204ENST00000400908 CWC27Q6UX04 472 aaKnown RBP15.87■□□□□ 0.13
RERE-204ENST00000400908 FERMT3Q86UX7 667 aa15.87■□□□□ 0.13
RERE-204ENST00000400908 CCDC63Q8NA47 563 aa15.87■□□□□ 0.13
RERE-204ENST00000400908 GNG11P61952 73 aa15.87■□□□□ 0.13
RERE-204ENST00000400908 NME9Q86XW9 330 aa15.87■□□□□ 0.13
RERE-204ENST00000400908 GBP7Q8N8V2 638 aaPredicted RBP15.87■□□□□ 0.13
RERE-204ENST00000400908 CASTP20810 708 aaKnown RBP15.87■□□□□ 0.13
RERE-204ENST00000400908 PPP1R9BQ96SB3 815 aa15.87■□□□□ 0.13
RERE-204ENST00000400908 BACH2Q9BYV9 841 aa15.87■□□□□ 0.13
RERE-204ENST00000400908 USP25Q9UHP3 1055 aa15.87■□□□□ 0.13
RERE-204ENST00000400908 EBAG9O00559 213 aa15.87■□□□□ 0.13
RERE-204ENST00000400908 CEBPAP49715 358 aaPredicted RBP15.87■□□□□ 0.13
RERE-204ENST00000400908 SMC1BQ8NDV3 1235 aa15.87■□□□□ 0.13
RERE-204ENST00000400908 ZSWIM4Q9H7M6 989 aa15.87■□□□□ 0.13
RERE-204ENST00000400908 ARFGAP3Q9NP61 516 aa15.87■□□□□ 0.13
RERE-204ENST00000400908 ZNF518AQ6AHZ1 1483 aa15.86■□□□□ 0.13
RERE-204ENST00000400908 A0A1B0GUA9 196 aa15.86■□□□□ 0.13
RERE-204ENST00000400908 CNNM3Q8NE01 707 aa15.86■□□□□ 0.13
RERE-204ENST00000400908 ZNF287Q9HBT7 754 aa15.86■□□□□ 0.13
RERE-204ENST00000400908 SF3B2Q13435 895 aaKnown RBP15.86■□□□□ 0.13
RERE-204ENST00000400908 UBE2Q2Q8WVN8 375 aa15.86■□□□□ 0.13
RERE-204ENST00000400908 MYO1BO43795 1136 aa15.86■□□□□ 0.13
RERE-204ENST00000400908 WASLO00401 505 aaPredicted RBP15.86■□□□□ 0.13
RERE-204ENST00000400908 GMNNO75496 209 aa15.86■□□□□ 0.13
RERE-204ENST00000400908 HDGFL1Q5TGJ6 251 aa15.86■□□□□ 0.13
RERE-204ENST00000400908 TCERG1LQ5VWI1 586 aa15.86■□□□□ 0.13
RERE-204ENST00000400908 SPTY2D1Q68D10 685 aaPredicted RBP15.86■□□□□ 0.13
RERE-204ENST00000400908 CCDC114Q96M63 670 aa15.86■□□□□ 0.13
RERE-204ENST00000400908 CCDC129Q6ZRS4 1044 aa15.85■□□□□ 0.13
RERE-204ENST00000400908 GOLIM4O00461 696 aa15.85■□□□□ 0.13
RERE-204ENST00000400908 LACTBP83111 547 aaPredicted RBP15.85■□□□□ 0.13
RERE-204ENST00000400908 ZNF530Q6P9A1 599 aaPredicted RBP15.85■□□□□ 0.13
RERE-204ENST00000400908 CTAGE15A4D2H0 777 aa15.85■□□□□ 0.13
RERE-204ENST00000400908 CTAGE8P0CG41 777 aa15.85■□□□□ 0.13
RERE-204ENST00000400908 CTAGE6Q86UF2 777 aa15.85■□□□□ 0.13
RERE-204ENST00000400908 CTAGE4Q8IX94 777 aa15.85■□□□□ 0.13
RERE-204ENST00000400908 ARID4AP29374 1257 aaPredicted RBP15.85■□□□□ 0.13
RERE-204ENST00000400908 SUDS3Q9H7L9 328 aaPredicted RBP15.85■□□□□ 0.13
RERE-204ENST00000400908 CCDC196A0A1B0GTZ2 297 aa15.84■□□□□ 0.13
RERE-204ENST00000400908 ATP2A1O14983 1001 aa15.84■□□□□ 0.13
RERE-204ENST00000400908 TATP17735 454 aaPredicted RBP15.84■□□□□ 0.13
RERE-204ENST00000400908 SETDB1Q15047 1291 aa15.84■□□□□ 0.13
RERE-204ENST00000400908 CCDC172P0C7W6 258 aa15.84■□□□□ 0.13
RERE-204ENST00000400908 CAPN2P17655 700 aa15.84■□□□□ 0.13
RERE-204ENST00000400908 CHMP4BP1P59074 171 aa15.84■□□□□ 0.13
RERE-204ENST00000400908 CHD1LQ86WJ1 897 aa15.84■□□□□ 0.13
RERE-204ENST00000400908 SELENOSQ9BQE4 189 aa15.84■□□□□ 0.13
RERE-204ENST00000400908 AIDAQ96BJ3 306 aa15.84■□□□□ 0.13
RERE-204ENST00000400908 THUMPD2Q9BTF0 503 aaKnown RBP15.84■□□□□ 0.13
RERE-204ENST00000400908 STX1AQ16623 288 aa15.84■□□□□ 0.13
RERE-204ENST00000400908 CCDC144CPQ8IYA2 1237 aa15.84■□□□□ 0.13
RERE-204ENST00000400908 STMN2Q93045 179 aa15.84■□□□□ 0.13
RERE-204ENST00000400908 DDX19AQ9NUU7 478 aaKnown RBP15.84■□□□□ 0.13
RERE-204ENST00000400908 PUF60Q9UHX1 559 aaKnown RBP15.84■□□□□ 0.13
RERE-204ENST00000400908 STXBP4Q6ZWJ1 553 aa15.83■□□□□ 0.13
RERE-204ENST00000400908 FAM114A2Q9NRY5 505 aa15.83■□□□□ 0.13
RERE-204ENST00000400908 RGS22Q8NE09 1264 aa15.83■□□□□ 0.13
RERE-204ENST00000400908 LRP2BPQ9P2M1 347 aa15.83■□□□□ 0.13
RERE-204ENST00000400908 ABCC2Q92887 1545 aa15.83■□□□□ 0.12
RERE-204ENST00000400908 CIB2O75838 187 aa15.83■□□□□ 0.12
RERE-204ENST00000400908 AMPD3Q01432 767 aa15.83■□□□□ 0.12
RERE-204ENST00000400908 C8orf76Q96K31 380 aa15.83■□□□□ 0.12
RERE-204ENST00000400908 SELENOOQ9BVL4 669 aa15.83■□□□□ 0.12
RERE-204ENST00000400908 CCDC174Q6PII3 467 aa15.83■□□□□ 0.12
RERE-204ENST00000400908 KIAA1524Q8TCG1 905 aa15.83■□□□□ 0.12
RERE-204ENST00000400908 VCX3BQ9H321 246 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms