RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 KLHL34Q8N239 644 aa16.6■□□□□ 0.25
APOB-202ENST00000399256 ZNF75DP51815 510 aa16.6■□□□□ 0.25
APOB-202ENST00000399256 ZSCAN25Q6NSZ9 544 aa16.6■□□□□ 0.25
APOB-202ENST00000399256 FLT4P35916 1363 aa16.6■□□□□ 0.25
APOB-202ENST00000399256 MAP3K5Q99683 1374 aa16.6■□□□□ 0.25
APOB-202ENST00000399256 IGSF1Q8N6C5 1336 aa16.6■□□□□ 0.25
APOB-202ENST00000399256 SMTNL1A8MU46 457 aa16.59■□□□□ 0.25
APOB-202ENST00000399256 RBM8AQ9Y5S9 174 aaKnown RBP16.59■□□□□ 0.25
APOB-202ENST00000399256 SBNO1A3KN83 1393 aa16.59■□□□□ 0.25
APOB-202ENST00000399256 ZKSCAN1P17029 563 aaPredicted RBP16.59■□□□□ 0.25
APOB-202ENST00000399256 SPATA32Q96LK8 384 aa16.59■□□□□ 0.25
APOB-202ENST00000399256 TM6SF1Q9BZW5 370 aa16.59■□□□□ 0.25
APOB-202ENST00000399256 TAF7Q15545 349 aaPredicted RBP16.58■□□□□ 0.24
APOB-202ENST00000399256 PLEKHG3A1L390 1219 aa16.58■□□□□ 0.24
APOB-202ENST00000399256 NECTIN1Q15223 517 aa16.58■□□□□ 0.24
APOB-202ENST00000399256 CREB3L3Q68CJ9 461 aa16.58■□□□□ 0.24
APOB-202ENST00000399256 PLA2G4DQ86XP0 818 aa16.58■□□□□ 0.24
APOB-202ENST00000399256 ZNF592Q92610 1267 aa16.58■□□□□ 0.24
APOB-202ENST00000399256 FEZ1Q99689 392 aa16.58■□□□□ 0.24
APOB-202ENST00000399256 TTC41PQ6P2S7 1318 aa16.58■□□□□ 0.24
APOB-202ENST00000399256 CCDC171Q6TFL3 1326 aa16.58■□□□□ 0.24
APOB-202ENST00000399256 FMN2Q9NZ56 1722 aa16.57■□□□□ 0.24
APOB-202ENST00000399256 HTATSF1O43719 755 aaKnown RBP16.57■□□□□ 0.24
APOB-202ENST00000399256 TPD52L1Q16890 204 aaPredicted RBP16.57■□□□□ 0.24
APOB-202ENST00000399256 DNAJC25Q9H1X3 360 aa16.57■□□□□ 0.24
APOB-202ENST00000399256 OGFRQ9NZT2 677 aa16.57■□□□□ 0.24
APOB-202ENST00000399256 TTC21AQ8NDW8 1320 aa16.57■□□□□ 0.24
APOB-202ENST00000399256 STRCQ7RTU9 1775 aa16.57■□□□□ 0.24
APOB-202ENST00000399256 ELP1O95163 1332 aa16.57■□□□□ 0.24
APOB-202ENST00000399256 ANXA1P04083 346 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 STK3Q13188 491 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 ZNF771Q7L3S4 317 aaPredicted RBP16.56■□□□□ 0.24
APOB-202ENST00000399256 CLASRPQ8N2M8 674 aaKnown RBP16.56■□□□□ 0.24
APOB-202ENST00000399256 CCDC112Q8NEF3 446 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 CACTINQ8WUQ7 758 aaKnown RBP16.56■□□□□ 0.24
APOB-202ENST00000399256 LTV1Q96GA3 475 aaPredicted RBP16.56■□□□□ 0.24
APOB-202ENST00000399256 FAM227BQ96M60 508 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 CLIP2Q9UDT6 1046 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 CTNNA3Q9UI47 895 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 RGPD8O14715 1765 aaPredicted RBP16.56■□□□□ 0.24
APOB-202ENST00000399256 PI4KAP2A4QPH2 592 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 NR1I2O75469 434 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 CCDC144BQ3MJ40 725 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 LARP1Q6PKG0 1096 aaKnown RBP16.56■□□□□ 0.24
APOB-202ENST00000399256 CCDC144CPQ8IYA2 1237 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 PI4KAP1Q8N8J0 262 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 ECHDC1Q9NTX5 307 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 USP42Q9H9J4 1324 aaKnown RBP16.56■□□□□ 0.24
APOB-202ENST00000399256 LRRC37A3O60309 1634 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 N4BP2Q86UW6 1770 aaPredicted RBP16.56■□□□□ 0.24
APOB-202ENST00000399256 ZNF165P49910 485 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 HSP90AB4PQ58FF6 505 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 BICD2Q8TD16 824 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 KCNB2Q92953 911 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 CLSTN2Q9H4D0 955 aa16.56■□□□□ 0.24
APOB-202ENST00000399256 PA2G4Q9UQ80 394 aaKnown RBP16.56■□□□□ 0.24
APOB-202ENST00000399256 BEND3Q5T5X7 828 aa16.55■□□□□ 0.24
APOB-202ENST00000399256 LEO1Q8WVC0 666 aaPredicted RBP16.55■□□□□ 0.24
APOB-202ENST00000399256 CHPF2Q9P2E5 772 aa16.55■□□□□ 0.24
APOB-202ENST00000399256 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.55■□□□□ 0.24
APOB-202ENST00000399256 IFIT2P09913 472 aaKnown RBP16.55■□□□□ 0.24
APOB-202ENST00000399256 TDRD7Q8NHU6 1098 aaKnown RBP16.55■□□□□ 0.24
APOB-202ENST00000399256 DDX19AQ9NUU7 478 aaKnown RBP16.55■□□□□ 0.24
APOB-202ENST00000399256 CRYBG1Q9Y4K1 1723 aa16.55■□□□□ 0.24
APOB-202ENST00000399256 PDCP20941 246 aa16.54■□□□□ 0.24
APOB-202ENST00000399256 DNAAF4Q8WXU2 420 aa16.54■□□□□ 0.24
APOB-202ENST00000399256 SCAND2PQ9GZW5 306 aaPredicted RBP16.54■□□□□ 0.24
APOB-202ENST00000399256 TAF6LQ9Y6J9 622 aa16.54■□□□□ 0.24
APOB-202ENST00000399256 ADGRL3Q9HAR2 1447 aa16.54■□□□□ 0.24
APOB-202ENST00000399256 STRCP1A6NGW2 1772 aa16.54■□□□□ 0.24
APOB-202ENST00000399256 SLC27A2O14975 620 aa16.54■□□□□ 0.24
APOB-202ENST00000399256 NMIQ13287 307 aaPredicted RBP16.54■□□□□ 0.24
APOB-202ENST00000399256 RBM33Q96EV2 1170 aaKnown RBP16.54■□□□□ 0.24
APOB-202ENST00000399256 NPHP3Q7Z494 1330 aa16.54■□□□□ 0.24
APOB-202ENST00000399256 ANKARQ7Z5J8 1434 aa16.53■□□□□ 0.24
APOB-202ENST00000399256 ARID5BQ14865 1188 aa16.53■□□□□ 0.24
APOB-202ENST00000399256 SYCP1Q15431 976 aa16.53■□□□□ 0.24
APOB-202ENST00000399256 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.53■□□□□ 0.24
APOB-202ENST00000399256 AACSQ86V21 672 aa16.53■□□□□ 0.24
APOB-202ENST00000399256 PGBD1Q96JS3 809 aa16.53■□□□□ 0.24
APOB-202ENST00000399256 CGNQ9P2M7 1197 aaKnown RBP16.53■□□□□ 0.24
APOB-202ENST00000399256 PAXBP1Q9Y5B6 917 aa16.53■□□□□ 0.24
APOB-202ENST00000399256 NUTM2GQ5VZR2 741 aa16.53■□□□□ 0.24
APOB-202ENST00000399256 USHBP1Q8N6Y0 703 aa16.53■□□□□ 0.24
APOB-202ENST00000399256 EVI5LQ96CN4 794 aa16.53■□□□□ 0.24
APOB-202ENST00000399256 GPATCH3Q96I76 525 aa16.53■□□□□ 0.24
APOB-202ENST00000399256 CACNA1FO60840 1977 aa16.53■□□□□ 0.24
APOB-202ENST00000399256 CEP135Q66GS9 1140 aa16.52■□□□□ 0.24
APOB-202ENST00000399256 BLOC1S2Q6QNY1 142 aa16.52■□□□□ 0.24
APOB-202ENST00000399256 USP27XA6NNY8 438 aa16.52■□□□□ 0.24
APOB-202ENST00000399256 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.52■□□□□ 0.24
APOB-202ENST00000399256 V9GYY5 206 aaPredicted RBP16.52■□□□□ 0.24
APOB-202ENST00000399256 PSMA5P28066 241 aa16.52■□□□□ 0.23
APOB-202ENST00000399256 RBM43Q6ZSC3 357 aaKnown RBP16.52■□□□□ 0.23
APOB-202ENST00000399256 MAP4K1Q92918 833 aa16.52■□□□□ 0.23
APOB-202ENST00000399256 DDX41Q9UJV9 622 aaKnown RBP16.52■□□□□ 0.23
APOB-202ENST00000399256 TOB2Q14106 344 aaPredicted RBP16.51■□□□□ 0.23
APOB-202ENST00000399256 NGDNQ8NEJ9 315 aaKnown RBP16.51■□□□□ 0.23
APOB-202ENST00000399256 DDX11Q96FC9 970 aa16.51■□□□□ 0.23
APOB-202ENST00000399256 A0A0D9SFI3 127 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms