RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 SASS6Q6UVJ0 657 aa18.17■□□□□ 0.5
LSS-202ENST00000397728 DDX11Q96FC9 970 aa18.17■□□□□ 0.5
LSS-202ENST00000397728 ABCA9Q8IUA7 1624 aa18.17■□□□□ 0.5
LSS-202ENST00000397728 USP6P35125 1406 aa18.17■□□□□ 0.5
LSS-202ENST00000397728 HAND2P61296 217 aa18.17■□□□□ 0.5
LSS-202ENST00000397728 TRIM35Q9UPQ4 493 aa18.17■□□□□ 0.5
LSS-202ENST00000397728 SOS1Q07889 1333 aaPredicted RBP18.17■□□□□ 0.5
LSS-202ENST00000397728 KRT18P05783 430 aaKnown RBP18.16■□□□□ 0.5
LSS-202ENST00000397728 CTCFLQ8NI51 663 aaPredicted RBP18.16■□□□□ 0.5
LSS-202ENST00000397728 BACH2Q9BYV9 841 aa18.16■□□□□ 0.5
LSS-202ENST00000397728 JAG2Q9Y219 1238 aa18.16■□□□□ 0.5
LSS-202ENST00000397728 MSL1Q68DK7 614 aa18.16■□□□□ 0.5
LSS-202ENST00000397728 IL17REQ8NFR9 667 aa18.16■□□□□ 0.5
LSS-202ENST00000397728 RBM17Q96I25 401 aaKnown RBP18.16■□□□□ 0.5
LSS-202ENST00000397728 EYA3Q99504 573 aa18.16■□□□□ 0.5
LSS-202ENST00000397728 TPM3P06753 285 aa18.16■□□□□ 0.5
LSS-202ENST00000397728 ZNF76P36508 570 aa18.16■□□□□ 0.5
LSS-202ENST00000397728 GSTO1P78417 241 aa18.16■□□□□ 0.5
LSS-202ENST00000397728 NAP1L5Q96NT1 182 aaPredicted RBP18.16■□□□□ 0.5
LSS-202ENST00000397728 WDR17Q8IZU2 1322 aa18.16■□□□□ 0.5
LSS-202ENST00000397728 GRM1Q13255 1194 aa18.16■□□□□ 0.5
LSS-202ENST00000397728 ZGPATQ8N5A5 531 aaKnown RBP18.16■□□□□ 0.5
LSS-202ENST00000397728 ZNF396Q96N95 335 aaPredicted RBP18.16■□□□□ 0.5
LSS-202ENST00000397728 METTL22Q9BUU2 404 aaPredicted RBP18.16■□□□□ 0.5
LSS-202ENST00000397728 CABP5Q9NP86 173 aa18.16■□□□□ 0.5
LSS-202ENST00000397728 KRT27Q7Z3Y8 459 aa18.15■□□□□ 0.5
LSS-202ENST00000397728 CRNKL1Q9BZJ0 848 aaKnown RBP18.15■□□□□ 0.5
LSS-202ENST00000397728 BICC1Q9H694 974 aaKnown RBP18.15■□□□□ 0.5
LSS-202ENST00000397728 KIF1BO60333 1816 aa18.15■□□□□ 0.5
LSS-202ENST00000397728 IFIT3O14879 490 aaKnown RBP18.15■□□□□ 0.5
LSS-202ENST00000397728 SEC63Q9UGP8 760 aaKnown RBP18.15■□□□□ 0.5
LSS-202ENST00000397728 KCNQ3O43525 872 aa18.15■□□□□ 0.5
LSS-202ENST00000397728 NAA16Q6N069 864 aaPredicted RBP18.15■□□□□ 0.5
LSS-202ENST00000397728 FAM196AQ6ZSG2 479 aa18.15■□□□□ 0.5
LSS-202ENST00000397728 UNC5CLQ8IV45 518 aa18.15■□□□□ 0.5
LSS-202ENST00000397728 ZSCAN31Q96LW9 406 aaPredicted RBP18.15■□□□□ 0.5
LSS-202ENST00000397728 PCDHB15Q9Y5E8 787 aa18.14■□□□□ 0.49
LSS-202ENST00000397728 TSPY2A6NKD2 308 aa18.14■□□□□ 0.49
LSS-202ENST00000397728 EIF4A1P60842 406 aaKnown RBP18.14■□□□□ 0.49
LSS-202ENST00000397728 ANKRD2Q9GZV1 360 aa18.14■□□□□ 0.49
LSS-202ENST00000397728 IGHDP01880 384 aa18.14■□□□□ 0.49
LSS-202ENST00000397728 DEKP35659 375 aaKnown RBP18.14■□□□□ 0.49
LSS-202ENST00000397728 CCDC191Q8NCU4 936 aa18.14■□□□□ 0.49
LSS-202ENST00000397728 VEZTQ9HBM0 779 aa18.14■□□□□ 0.49
LSS-202ENST00000397728 USP16Q9Y5T5 823 aa18.14■□□□□ 0.49
LSS-202ENST00000397728 SPATA31A3Q5VYP0 1347 aa18.13■□□□□ 0.49
LSS-202ENST00000397728 K7ELQ4 463 aaPredicted RBP18.13■□□□□ 0.49
LSS-202ENST00000397728 JMYQ8N9B5 988 aa18.13■□□□□ 0.49
LSS-202ENST00000397728 TET3O43151 1660 aa18.13■□□□□ 0.49
LSS-202ENST00000397728 H0YIN7 160 aa18.13■□□□□ 0.49
LSS-202ENST00000397728 NOL7Q9UMY1 257 aaKnown RBP18.13■□□□□ 0.49
LSS-202ENST00000397728 ERBB3P21860 1342 aa18.13■□□□□ 0.49
LSS-202ENST00000397728 PDE4BQ07343 736 aa18.13■□□□□ 0.49
LSS-202ENST00000397728 PICALMQ13492 652 aa18.13■□□□□ 0.49
LSS-202ENST00000397728 SLC9C2Q5TAH2 1124 aa18.13■□□□□ 0.49
LSS-202ENST00000397728 LOC102724428A0A0B4J2F2 783 aa18.12■□□□□ 0.49
LSS-202ENST00000397728 SIK1P57059 783 aa18.12■□□□□ 0.49
LSS-202ENST00000397728 SEPT12Q8IYM1 358 aa18.12■□□□□ 0.49
LSS-202ENST00000397728 KINO60870 393 aaKnown RBP18.12■□□□□ 0.49
LSS-202ENST00000397728 RLBP1P12271 317 aa18.12■□□□□ 0.49
LSS-202ENST00000397728 CNKSR2Q8WXI2 1034 aa18.12■□□□□ 0.49
LSS-202ENST00000397728 ITGA6P23229 1130 aa18.12■□□□□ 0.49
LSS-202ENST00000397728 CERKQ8TCT0 537 aa18.12■□□□□ 0.49
LSS-202ENST00000397728 ZHX3Q9H4I2 956 aa18.12■□□□□ 0.49
LSS-202ENST00000397728 UFL1O94874 794 aa18.11■□□□□ 0.49
LSS-202ENST00000397728 ASAP1Q9ULH1 1129 aa18.11■□□□□ 0.49
LSS-202ENST00000397728 SHROOM2Q13796 1616 aa18.11■□□□□ 0.49
LSS-202ENST00000397728 SLC12A7Q9Y666 1083 aa18.11■□□□□ 0.49
LSS-202ENST00000397728 CCDC196A0A1B0GTZ2 297 aa18.11■□□□□ 0.49
LSS-202ENST00000397728 TFCP2Q12800 502 aa18.11■□□□□ 0.49
LSS-202ENST00000397728 WASF1Q92558 559 aa18.11■□□□□ 0.49
LSS-202ENST00000397728 ME1P48163 572 aa18.11■□□□□ 0.49
LSS-202ENST00000397728 STX8Q9UNK0 236 aa18.11■□□□□ 0.49
LSS-202ENST00000397728 GJA3Q9Y6H8 435 aa18.11■□□□□ 0.49
LSS-202ENST00000397728 USP19O94966 1318 aa18.11■□□□□ 0.49
LSS-202ENST00000397728 ADGRL3Q9HAR2 1447 aa18.1■□□□□ 0.49
LSS-202ENST00000397728 PDE8AO60658 829 aa18.1■□□□□ 0.49
LSS-202ENST00000397728 SSBP05455 408 aaKnown RBP eCLIP18.1■□□□□ 0.49
LSS-202ENST00000397728 MFSD6Q6ZSS7 791 aa18.1■□□□□ 0.49
LSS-202ENST00000397728 GIGYF1O75420 1035 aaPredicted RBP18.09■□□□□ 0.49
LSS-202ENST00000397728 ZFYP08048 801 aaPredicted RBP18.09■□□□□ 0.49
LSS-202ENST00000397728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.09■□□□□ 0.496e-12■□□□□ 8.5
LSS-202ENST00000397728 KCNQ4P56696 695 aa18.09■□□□□ 0.49
LSS-202ENST00000397728 HDAC1Q13547 482 aaPredicted RBP18.09■□□□□ 0.49
LSS-202ENST00000397728 CEP85Q6P2H3 762 aa18.09■□□□□ 0.49
LSS-202ENST00000397728 HMGB1P09429 215 aaKnown RBP18.09■□□□□ 0.49
LSS-202ENST00000397728 CCDC83Q8IWF9 413 aa18.09■□□□□ 0.49
LSS-202ENST00000397728 SLC4A4Q9Y6R1 1079 aa18.09■□□□□ 0.49
LSS-202ENST00000397728 ATP7BP35670 1465 aa18.09■□□□□ 0.49
LSS-202ENST00000397728 PDE1AP54750 535 aa18.09■□□□□ 0.49
LSS-202ENST00000397728 OLFM4Q6UX06 510 aa18.08■□□□□ 0.49
LSS-202ENST00000397728 FLAD1Q8NFF5 587 aa18.08■□□□□ 0.49
LSS-202ENST00000397728 AFF2P51816 1311 aa18.08■□□□□ 0.48
LSS-202ENST00000397728 WDR33Q9C0J8 1336 aaKnown RBP18.08■□□□□ 0.48
LSS-202ENST00000397728 CHMP4BP1P59074 171 aa18.08■□□□□ 0.48
LSS-202ENST00000397728 CATIPQ7Z7H3 387 aa18.08■□□□□ 0.48
LSS-202ENST00000397728 IPO7O95373 1038 aaKnown RBP18.08■□□□□ 0.48
LSS-202ENST00000397728 TTC22Q5TAA0 569 aa18.08■□□□□ 0.48
LSS-202ENST00000397728 KLHDC4Q8TBB5 520 aa18.08■□□□□ 0.48
LSS-202ENST00000397728 KDM5AP29375 1690 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 212.2 ms