RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 OLFM4Q6UX06 510 aa23.14■■□□□ 1.29
EXOSC3-202ENST00000396521 RBM17Q96I25 401 aaKnown RBP23.14■■□□□ 1.29
EXOSC3-202ENST00000396521 VPS33BQ9H267 617 aa23.14■■□□□ 1.29
EXOSC3-202ENST00000396521 RNF123Q5XPI4 1314 aa23.13■■□□□ 1.29
EXOSC3-202ENST00000396521 FOXN1O15353 648 aa23.13■■□□□ 1.29
EXOSC3-202ENST00000396521 DEFB115Q30KQ5 88 aa23.13■■□□□ 1.29
EXOSC3-202ENST00000396521 RRP7AQ9Y3A4 280 aaKnown RBP23.13■■□□□ 1.29
EXOSC3-202ENST00000396521 PARP10Q53GL7 1025 aa23.12■■□□□ 1.29
EXOSC3-202ENST00000396521 PPP1R42Q7Z4L9 355 aa23.12■■□□□ 1.29
EXOSC3-202ENST00000396521 NUTM1Q86Y26 1132 aa23.12■■□□□ 1.29
EXOSC3-202ENST00000396521 NGEFQ8N5V2 710 aa23.12■■□□□ 1.29
EXOSC3-202ENST00000396521 WBP1LQ9NX94 342 aa23.12■■□□□ 1.29
EXOSC3-202ENST00000396521 SNED1Q8TER0 1413 aa23.11■■□□□ 1.29
EXOSC3-202ENST00000396521 MAP2K1Q02750 393 aaPredicted RBP23.11■■□□□ 1.29
EXOSC3-202ENST00000396521 NFE2L2Q16236 605 aa23.11■■□□□ 1.29
EXOSC3-202ENST00000396521 MAP1SQ66K74 1059 aaPredicted RBP23.1■■□□□ 1.29
EXOSC3-202ENST00000396521 GIGYF2Q6Y7W6 1299 aaKnown RBP23.1■■□□□ 1.29
EXOSC3-202ENST00000396521 ZNF34Q8IZ26 560 aa23.1■■□□□ 1.29
EXOSC3-202ENST00000396521 LARGE2Q8N3Y3 721 aa23.1■■□□□ 1.29
EXOSC3-202ENST00000396521 CACNA1SQ13698 1873 aa23.09■■□□□ 1.29
EXOSC3-202ENST00000396521 TTLL7Q6ZT98 887 aa23.09■■□□□ 1.29
EXOSC3-202ENST00000396521 USP50Q70EL3 339 aaPredicted RBP23.09■■□□□ 1.29
EXOSC3-202ENST00000396521 NLRP3Q96P20 1036 aa23.09■■□□□ 1.29
EXOSC3-202ENST00000396521 PLEKHF1Q96S99 279 aa23.09■■□□□ 1.29
EXOSC3-202ENST00000396521 ABCC12Q96J65 1359 aa23.09■■□□□ 1.29
EXOSC3-202ENST00000396521 MYL6BP14649 208 aa23.08■■□□□ 1.29
EXOSC3-202ENST00000396521 GPTP24298 496 aa23.08■■□□□ 1.29
EXOSC3-202ENST00000396521 SUSD4Q5VX71 490 aa23.08■■□□□ 1.29
EXOSC3-202ENST00000396521 BABAM1Q9NWV8 329 aa23.08■■□□□ 1.29
EXOSC3-202ENST00000396521 GJA3Q9Y6H8 435 aa23.08■■□□□ 1.29
EXOSC3-202ENST00000396521 MAPK8IP3Q9UPT6 1336 aa23.08■■□□□ 1.28
EXOSC3-202ENST00000396521 PPEF1O14829 653 aaPredicted RBP23.07■■□□□ 1.28
EXOSC3-202ENST00000396521 NIM1KQ8IY84 436 aa23.07■■□□□ 1.28
EXOSC3-202ENST00000396521 ZBTB3Q9H5J0 574 aa23.07■■□□□ 1.28
EXOSC3-202ENST00000396521 DDX21Q9NR30 783 aaKnown RBP eCLIP23.07■■□□□ 1.28
EXOSC3-202ENST00000396521 UBN2Q6ZU65 1347 aa23.07■■□□□ 1.28
EXOSC3-202ENST00000396521 NTSR2O95665 410 aa23.06■■□□□ 1.28
EXOSC3-202ENST00000396521 SLC10A5Q5PT55 438 aa23.06■■□□□ 1.28
EXOSC3-202ENST00000396521 SUPT20HQ8NEM7 779 aa23.06■■□□□ 1.28
EXOSC3-202ENST00000396521 ABT1Q9ULW3 272 aaKnown RBP23.06■■□□□ 1.28
EXOSC3-202ENST00000396521 LAMB4A4D0S4 1761 aa23.05■■□□□ 1.28
EXOSC3-202ENST00000396521 ADAMTSL1Q8N6G6 1762 aa23.05■■□□□ 1.28
EXOSC3-202ENST00000396521 ECE1P42892 770 aa23.05■■□□□ 1.28
EXOSC3-202ENST00000396521 WDR33Q9C0J8 1336 aaKnown RBP23.05■■□□□ 1.28
EXOSC3-202ENST00000396521 SCNN1DP51172 638 aa23.04■■□□□ 1.28
EXOSC3-202ENST00000396521 UTP14AQ9BVJ6 771 aaKnown RBP23.04■■□□□ 1.28
EXOSC3-202ENST00000396521 ATP6V0A2Q9Y487 856 aa23.04■■□□□ 1.28
EXOSC3-202ENST00000396521 BBOX1O75936 387 aa23.03■■□□□ 1.28
EXOSC3-202ENST00000396521 HSP90AB3PQ58FF7 597 aa23.03■■□□□ 1.28
EXOSC3-202ENST00000396521 TSPYL4Q9UJ04 414 aa23.03■■□□□ 1.28
EXOSC3-202ENST00000396521 PPIP5K2O43314 1243 aa23.02■■□□□ 1.28
EXOSC3-202ENST00000396521 LBX1P52954 281 aa23.02■■□□□ 1.28
EXOSC3-202ENST00000396521 EPS15P42566 896 aa23.01■■□□□ 1.27
EXOSC3-202ENST00000396521 BEGAINQ9BUH8 593 aa23.01■■□□□ 1.27
EXOSC3-202ENST00000396521 RTFDC1Q9BY42 306 aaPredicted RBP23.01■■□□□ 1.27
EXOSC3-202ENST00000396521 ADARB2Q9NS39 739 aaKnown RBP23.01■■□□□ 1.27
EXOSC3-202ENST00000396521 ZNRF3Q9ULT6 936 aa23.01■■□□□ 1.27
EXOSC3-202ENST00000396521 KDM3BQ7LBC6 1761 aa23■■□□□ 1.27
EXOSC3-202ENST00000396521 LMOD3Q0VAK6 560 aa23■■□□□ 1.27
EXOSC3-202ENST00000396521 THUMPD2Q9BTF0 503 aaKnown RBP23■■□□□ 1.27
EXOSC3-202ENST00000396521 CDHR2Q9BYE9 1310 aa23■■□□□ 1.27
EXOSC3-202ENST00000396521 SP8Q8IXZ3 490 aa22.99■■□□□ 1.27
EXOSC3-202ENST00000396521 GPRC5DQ9NZD1 345 aa22.99■■□□□ 1.27
EXOSC3-202ENST00000396521 NUP98P52948 1817 aa22.98■■□□□ 1.27
EXOSC3-202ENST00000396521 HSPA8P11142 646 aaKnown RBP22.98■■□□□ 1.27
EXOSC3-202ENST00000396521 PDIA6Q15084 440 aa22.98■■□□□ 1.27
EXOSC3-202ENST00000396521 TMC4Q7Z404 712 aa22.98■■□□□ 1.27
EXOSC3-202ENST00000396521 LRP10Q7Z4F1 713 aa22.98■■□□□ 1.27
EXOSC3-202ENST00000396521 TCERG1O14776 1098 aaKnown RBP22.97■■□□□ 1.27
EXOSC3-202ENST00000396521 MAP2K2P36507 400 aa22.97■■□□□ 1.27
EXOSC3-202ENST00000396521 ZC3H15Q8WU90 426 aaKnown RBP22.97■■□□□ 1.27
EXOSC3-202ENST00000396521 CAPNS2Q96L46 248 aa22.97■■□□□ 1.27
EXOSC3-202ENST00000396521 EIF2S2P20042 333 aaKnown RBP22.96■■□□□ 1.27
EXOSC3-202ENST00000396521 RIPK4P57078 832 aa22.96■■□□□ 1.27
EXOSC3-202ENST00000396521 TNIP1Q15025 636 aa22.96■■□□□ 1.27
EXOSC3-202ENST00000396521 AOC3Q16853 763 aa22.96■■□□□ 1.27
EXOSC3-202ENST00000396521 DPP8Q6V1X1 898 aaPredicted RBP22.96■■□□□ 1.27
EXOSC3-202ENST00000396521 MPNDQ8N594 471 aa22.96■■□□□ 1.27
EXOSC3-202ENST00000396521 GPR101Q96P66 508 aaPredicted RBP22.96■■□□□ 1.27
EXOSC3-202ENST00000396521 TLL2Q9Y6L7 1015 aa22.96■■□□□ 1.27
EXOSC3-202ENST00000396521 COL4A5P29400 1685 aa22.95■■□□□ 1.26
EXOSC3-202ENST00000396521 CXCL9Q07325 125 aa22.95■■□□□ 1.26
EXOSC3-202ENST00000396521 C3orf67Q6ZVT6 689 aa22.95■■□□□ 1.26
EXOSC3-202ENST00000396521 DDX46Q7L014 1031 aaKnown RBP22.95■■□□□ 1.26
EXOSC3-202ENST00000396521 HHIPL1Q96JK4 782 aa22.95■■□□□ 1.26
EXOSC3-202ENST00000396521 ABCC4O15439 1325 aa22.94■■□□□ 1.26
EXOSC3-202ENST00000396521 CA12O43570 354 aa22.94■■□□□ 1.26
EXOSC3-202ENST00000396521 KIAA2012Q0VF49 1180 aa22.94■■□□□ 1.26
EXOSC3-202ENST00000396521 CST9Q5W186 159 aa22.94■■□□□ 1.26
EXOSC3-202ENST00000396521 PAXIP1Q6ZW49 1069 aaPredicted RBP22.94■■□□□ 1.26
EXOSC3-202ENST00000396521 PGAP2Q9UHJ9 254 aa22.94■■□□□ 1.26
EXOSC3-202ENST00000396521 CIAPIN1Q6FI81 312 aa22.93■■□□□ 1.26
EXOSC3-202ENST00000396521 NLRP10Q86W26 655 aa22.93■■□□□ 1.26
EXOSC3-202ENST00000396521 SH3TC1Q8TE82 1336 aa22.92■■□□□ 1.26
EXOSC3-202ENST00000396521 TCIRG1Q13488 830 aa22.92■■□□□ 1.26
EXOSC3-202ENST00000396521 RALBP1Q15311 655 aa22.92■■□□□ 1.26
EXOSC3-202ENST00000396521 COPS6Q7L5N1 327 aa22.92■■□□□ 1.26
EXOSC3-202ENST00000396521 TRMT112Q9UI30 125 aaKnown RBP22.92■■□□□ 1.26
EXOSC3-202ENST00000396521 DLG5Q8TDM6 1919 aa22.91■■□□□ 1.26
EXOSC3-202ENST00000396521 GRAPQ13588 217 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms