RNA–Protein interactions for RNA: ENST00000396356.7

SOX6-202, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SOX6, Length 8,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-202ENST00000396356 PDZRN3Q9UPQ7 1066 aa9.29□□□□□ -0.92
SOX6-202ENST00000396356 AOX1Q06278 1338 aa9.29□□□□□ -0.92
SOX6-202ENST00000396356 CCDC38Q502W7 563 aa9.29□□□□□ -0.92
SOX6-202ENST00000396356 TAX1BP1Q86VP1 789 aa9.29□□□□□ -0.92
SOX6-202ENST00000396356 RTL9Q8NET4 1388 aa9.29□□□□□ -0.92
SOX6-202ENST00000396356 RAD21O60216 631 aa9.29□□□□□ -0.92
SOX6-202ENST00000396356 TTC41PQ6P2S7 1318 aa9.29□□□□□ -0.92
SOX6-202ENST00000396356 NOL3O60936 208 aaKnown RBP9.29□□□□□ -0.92
SOX6-202ENST00000396356 IRX4P78413 519 aa9.29□□□□□ -0.92
SOX6-202ENST00000396356 FOXD4L5Q5VV16 416 aaPredicted RBP9.29□□□□□ -0.92
SOX6-202ENST00000396356 AFAP1L2Q8N4X5 818 aa9.29□□□□□ -0.92
SOX6-202ENST00000396356 FOXD4L4Q8WXT5 416 aaPredicted RBP9.29□□□□□ -0.92
SOX6-202ENST00000396356 KIAA0753Q2KHM9 967 aa9.29□□□□□ -0.92
SOX6-202ENST00000396356 DBF4Q9UBU7 674 aaPredicted RBP9.29□□□□□ -0.92
SOX6-202ENST00000396356 TSKSQ9UJT2 592 aa9.29□□□□□ -0.92
SOX6-202ENST00000396356 ANAPC4Q9UJX5 808 aa9.29□□□□□ -0.92
SOX6-202ENST00000396356 KRT86O43790 486 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 CABP4P57796 275 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 HDAC1Q13547 482 aaPredicted RBP9.28□□□□□ -0.92
SOX6-202ENST00000396356 ARHGAP24Q8N264 748 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 SRGAP3O43295 1099 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 CEP135Q66GS9 1140 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 DAAM2Q86T65 1068 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 AACSQ86V21 672 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 UQCRFS1P1P0C7P4 283 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 CCDC102BQ68D86 513 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 BRAPQ7Z569 592 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 HOMER2Q9NSB8 354 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 TMOD4Q9NZQ9 345 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 SLC4A2P04920 1241 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 MAP3K9P80192 1104 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 MCTP2Q6DN12 878 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 HSF2BPO75031 334 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 PDE4CQ08493 712 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 MAP3K21Q5TCX8 1036 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 RABGAP1Q9Y3P9 1069 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 MPHOSPH10O00566 681 aaKnown RBP9.28□□□□□ -0.92
SOX6-202ENST00000396356 ZNF530Q6P9A1 599 aaPredicted RBP9.28□□□□□ -0.92
SOX6-202ENST00000396356 ANKLE2Q86XL3 938 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 NAPBQ9H115 298 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 DMRT2Q9Y5R5 561 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 SLC12A7Q9Y666 1083 aa9.28□□□□□ -0.92
SOX6-202ENST00000396356 NUCKS1Q9H1E3 243 aaKnown RBP9.28□□□□□ -0.92
SOX6-202ENST00000396356 ZMYM4Q5VZL5 1548 aa9.27□□□□□ -0.92
SOX6-202ENST00000396356 GIGYF1O75420 1035 aaPredicted RBP9.27□□□□□ -0.92
SOX6-202ENST00000396356 CDC5LQ99459 802 aaKnown RBP9.27□□□□□ -0.92
SOX6-202ENST00000396356 NPC1L1Q9UHC9 1359 aa9.27□□□□□ -0.92
SOX6-202ENST00000396356 TRAPPC8Q9Y2L5 1435 aa9.27□□□□□ -0.92
SOX6-202ENST00000396356 SF3B2Q13435 895 aaKnown RBP9.27□□□□□ -0.92
SOX6-202ENST00000396356 POTEDQ86YR6 584 aa9.27□□□□□ -0.92
SOX6-202ENST00000396356 FAM200AQ8TCP9 573 aa9.27□□□□□ -0.92
SOX6-202ENST00000396356 SNX21Q969T3 373 aa9.27□□□□□ -0.92
SOX6-202ENST00000396356 FEZ2Q9UHY8 353 aaPredicted RBP9.27□□□□□ -0.92
SOX6-202ENST00000396356 ADAMTS8Q9UP79 889 aa9.27□□□□□ -0.92
SOX6-202ENST00000396356 RAPGEF6Q8TEU7 1601 aa9.27□□□□□ -0.93
SOX6-202ENST00000396356 CNGA4Q8IV77 575 aa9.27□□□□□ -0.93
SOX6-202ENST00000396356 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.27□□□□□ -0.93
SOX6-202ENST00000396356 BCL2L13Q9BXK5 485 aa9.27□□□□□ -0.93
SOX6-202ENST00000396356 VCXQ9H320 206 aa9.27□□□□□ -0.93
SOX6-202ENST00000396356 NPHP3Q7Z494 1330 aa9.27□□□□□ -0.93
SOX6-202ENST00000396356 PLB1Q6P1J6 1458 aa9.27□□□□□ -0.93
SOX6-202ENST00000396356 NUP88Q99567 741 aaPredicted RBP9.27□□□□□ -0.93
SOX6-202ENST00000396356 PPP1R1BQ9UD71 204 aaPredicted RBP9.27□□□□□ -0.93
SOX6-202ENST00000396356 NAIPQ13075 1403 aa9.27□□□□□ -0.93
SOX6-202ENST00000396356 VAV2P52735 878 aa9.27□□□□□ -0.93
SOX6-202ENST00000396356 IQSEC3Q9UPP2 1182 aaPredicted RBP9.27□□□□□ -0.93
SOX6-202ENST00000396356 CTNNA2P26232 953 aa9.27□□□□□ -0.93
SOX6-202ENST00000396356 CCDC174Q6PII3 467 aa9.27□□□□□ -0.93
SOX6-202ENST00000396356 KIF4BQ2VIQ3 1234 aa9.27□□□□□ -0.93
SOX6-202ENST00000396356 PANK1Q8TE04 598 aa9.27□□□□□ -0.93
SOX6-202ENST00000396356 MTRF1LQ9UGC7 380 aaKnown RBP9.27□□□□□ -0.93
SOX6-202ENST00000396356 TPCN1Q9ULQ1 816 aa9.27□□□□□ -0.93
SOX6-202ENST00000396356 TACC1O75410 805 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 HLA-DOAP06340 250 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 GPR161Q8N6U8 529 aaKnown RBP9.26□□□□□ -0.93
SOX6-202ENST00000396356 ARID3AQ99856 593 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 NSD3Q9BZ95 1437 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 A0A1B0GUA9 196 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 CTAGE9A4FU28 777 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 PPP1R2P3Q6NXS1 205 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 TAOK1Q7L7X3 1001 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 PODNQ7Z5L7 613 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 IMPG2Q9BZV3 1241 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 CENPHQ9H3R5 247 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.26□□□□□ -0.93
SOX6-202ENST00000396356 PDE6BP35913 854 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 SSRP1Q08945 709 aaKnown RBP9.26□□□□□ -0.93
SOX6-202ENST00000396356 CFAP58Q5T655 872 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 PPFIBP2Q8ND30 876 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 HOOK2Q96ED9 719 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 TRIM37O94972 964 aa9.26□□□□□ -0.93
SOX6-202ENST00000396356 NOB1Q9ULX3 412 aaKnown RBP9.26□□□□□ -0.93
SOX6-202ENST00000396356 PSMA7O14818 248 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 ARHGAP25P42331 645 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 ZNF710Q8N1W2 664 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 DDX23Q9BUQ8 820 aaKnown RBP9.25□□□□□ -0.93
SOX6-202ENST00000396356 KDM5AP29375 1690 aaKnown RBP9.25□□□□□ -0.93
SOX6-202ENST00000396356 SLFN5Q08AF3 891 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 RAB3IL1Q8TBN0 382 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 JAKMIP1Q96N16 626 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms