RNA–Protein interactions for RNA: ENST00000395873.7

ZNF248-204, Transcript of zinc finger protein 248, humanhuman

TSL 3

Gene ZNF248, Length 698 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-204ENST00000395873 CHPF2Q9P2E5 772 aa28.58■■■□□ 2.17
ZNF248-204ENST00000395873 ABCC12Q96J65 1359 aa28.58■■■□□ 2.17
ZNF248-204ENST00000395873 NMRK2Q9NPI5 230 aa28.57■■■□□ 2.16
ZNF248-204ENST00000395873 HYPKQ9NX55 129 aa28.57■■■□□ 2.16
ZNF248-204ENST00000395873 NTSR2O95665 410 aa28.56■■■□□ 2.16
ZNF248-204ENST00000395873 UTP14AQ9BVJ6 771 aaKnown RBP28.56■■■□□ 2.16
ZNF248-204ENST00000395873 GLTPD2A6NH11 291 aa28.55■■■□□ 2.16
ZNF248-204ENST00000395873 CCDC27Q2M243 656 aa28.55■■■□□ 2.16
ZNF248-204ENST00000395873 DPY19L2Q6NUT2 758 aa28.55■■■□□ 2.16
ZNF248-204ENST00000395873 RTKN2Q8IZC4 609 aa28.55■■■□□ 2.16
ZNF248-204ENST00000395873 NCBP3Q53F19 620 aaKnown RBP28.54■■■□□ 2.16
ZNF248-204ENST00000395873 LAMB2P55268 1798 aa28.53■■■□□ 2.16
ZNF248-204ENST00000395873 TCIRG1Q13488 830 aa28.53■■■□□ 2.16
ZNF248-204ENST00000395873 CCDC184Q52MB2 194 aa28.53■■■□□ 2.16
ZNF248-204ENST00000395873 CC2D2BQ6DHV5 1058 aa28.53■■■□□ 2.16
ZNF248-204ENST00000395873 PLBD2Q8NHP8 589 aa28.53■■■□□ 2.16
ZNF248-204ENST00000395873 C7orf43Q8WVR3 580 aa28.53■■■□□ 2.16
ZNF248-204ENST00000395873 RBM17Q96I25 401 aaKnown RBP28.53■■■□□ 2.16
ZNF248-204ENST00000395873 NLRP3Q96P20 1036 aa28.53■■■□□ 2.16
ZNF248-204ENST00000395873 HOXA10P31260 410 aaPredicted RBP28.52■■■□□ 2.16
ZNF248-204ENST00000395873 PRELPP51888 382 aa28.52■■■□□ 2.16
ZNF248-204ENST00000395873 GRIPAP1Q4V328 841 aa28.52■■■□□ 2.16
ZNF248-204ENST00000395873 HSPA6P17066 643 aa28.51■■■□□ 2.15
ZNF248-204ENST00000395873 ANKRD13DQ6ZTN6 518 aa28.51■■■□□ 2.15
ZNF248-204ENST00000395873 RBM46Q8TBY0 533 aaKnown RBP28.51■■■□□ 2.15
ZNF248-204ENST00000395873 WDR90Q96KV7 1748 aa28.51■■■□□ 2.15
ZNF248-204ENST00000395873 FKBP4Q02790 459 aaKnown RBP eCLIP28.5■■■□□ 2.15
ZNF248-204ENST00000395873 SLC10A5Q5PT55 438 aa28.49■■■□□ 2.15
ZNF248-204ENST00000395873 NLRP10Q86W26 655 aa28.49■■■□□ 2.15
ZNF248-204ENST00000395873 CRAMP1Q96RY5 1269 aa28.49■■■□□ 2.15
ZNF248-204ENST00000395873 TMX4Q9H1E5 349 aaPredicted RBP28.49■■■□□ 2.15
ZNF248-204ENST00000395873 RRAGCQ9HB90 399 aa28.49■■■□□ 2.15
ZNF248-204ENST00000395873 CACNA1FO60840 1977 aa28.48■■■□□ 2.15
ZNF248-204ENST00000395873 SH3TC1Q8TE82 1336 aa28.47■■■□□ 2.15
ZNF248-204ENST00000395873 VEGFAP15692 232 aaPredicted RBP28.47■■■□□ 2.15
ZNF248-204ENST00000395873 TRMT112Q9UI30 125 aaKnown RBP28.47■■■□□ 2.15
ZNF248-204ENST00000395873 GOLGA2Q08379 1002 aa28.46■■■□□ 2.15
ZNF248-204ENST00000395873 CCDC30Q5VVM6 783 aa28.46■■■□□ 2.15
ZNF248-204ENST00000395873 IL16Q14005 1332 aa28.45■■■□□ 2.15
ZNF248-204ENST00000395873 FSTL1Q12841 308 aa28.45■■■□□ 2.14
ZNF248-204ENST00000395873 WWC1Q8IX03 1113 aa28.45■■■□□ 2.14
ZNF248-204ENST00000395873 DDX60Q8IY21 1712 aaKnown RBP28.44■■■□□ 2.14
ZNF248-204ENST00000395873 SCN4AP35499 1836 aa28.44■■■□□ 2.14
ZNF248-204ENST00000395873 PSMD1Q99460 953 aa28.44■■■□□ 2.14
ZNF248-204ENST00000395873 ELL2O00472 640 aaPredicted RBP28.43■■■□□ 2.14
ZNF248-204ENST00000395873 PPEF1O14829 653 aaPredicted RBP28.42■■■□□ 2.14
ZNF248-204ENST00000395873 DDX58O95786 925 aaKnown RBP28.42■■■□□ 2.14
ZNF248-204ENST00000395873 RIC3Q7Z5B4 369 aa28.42■■■□□ 2.14
ZNF248-204ENST00000395873 C8orf58Q8NAV2 365 aa28.41■■■□□ 2.14
ZNF248-204ENST00000395873 ISCA1Q9BUE6 129 aa28.41■■■□□ 2.14
ZNF248-204ENST00000395873 IARSP41252 1262 aaKnown RBP28.4■■■□□ 2.14
ZNF248-204ENST00000395873 APLP1P51693 650 aa28.4■■■□□ 2.14
ZNF248-204ENST00000395873 SYNE4Q8N205 404 aa28.4■■■□□ 2.14
ZNF248-204ENST00000395873 SMC1BQ8NDV3 1235 aa28.4■■■□□ 2.14
ZNF248-204ENST00000395873 HSP90B1P14625 803 aaKnown RBP28.39■■■□□ 2.14
ZNF248-204ENST00000395873 TRIM28Q13263 835 aaKnown RBP28.39■■■□□ 2.14
ZNF248-204ENST00000395873 DDX46Q7L014 1031 aaKnown RBP28.39■■■□□ 2.14
ZNF248-204ENST00000395873 STK31Q9BXU1 1019 aa28.39■■■□□ 2.14
ZNF248-204ENST00000395873 ZNF277Q9NRM2 450 aaPredicted RBP28.39■■■□□ 2.14
ZNF248-204ENST00000395873 SNED1Q8TER0 1413 aa28.38■■■□□ 2.13
ZNF248-204ENST00000395873 JDP2Q8WYK2 163 aa28.38■■■□□ 2.13
ZNF248-204ENST00000395873 BBOX1O75936 387 aa28.37■■■□□ 2.13
ZNF248-204ENST00000395873 OLFM4Q6UX06 510 aa28.37■■■□□ 2.13
ZNF248-204ENST00000395873 C3orf67Q6ZVT6 689 aa28.37■■■□□ 2.13
ZNF248-204ENST00000395873 WDR63Q8IWG1 891 aa28.37■■■□□ 2.13
ZNF248-204ENST00000395873 TSR2Q969E8 191 aaKnown RBP28.37■■■□□ 2.13
ZNF248-204ENST00000395873 ABCC4O15439 1325 aa28.37■■■□□ 2.13
ZNF248-204ENST00000395873 IQCA1LA6NCM1 817 aa28.36■■■□□ 2.13
ZNF248-204ENST00000395873 HCLS1P14317 486 aaPredicted RBP28.36■■■□□ 2.13
ZNF248-204ENST00000395873 TMC4Q7Z404 712 aa28.36■■■□□ 2.13
ZNF248-204ENST00000395873 PHAXQ9H814 394 aaKnown RBP28.36■■■□□ 2.13
ZNF248-204ENST00000395873 ATP6V0A2Q9Y487 856 aa28.36■■■□□ 2.13
ZNF248-204ENST00000395873 ATP5J2-PTCD1G3V325 749 aa28.35■■■□□ 2.13
ZNF248-204ENST00000395873 TWISTNBQ3B726 338 aaPredicted RBP28.35■■■□□ 2.13
ZNF248-204ENST00000395873 SUPT20HQ8NEM7 779 aa28.34■■■□□ 2.13
ZNF248-204ENST00000395873 VPS33BQ9H267 617 aa28.34■■■□□ 2.13
ZNF248-204ENST00000395873 TAF1P21675 1872 aa28.34■■■□□ 2.13
ZNF248-204ENST00000395873 DDNO94850 711 aaPredicted RBP28.32■■■□□ 2.12
ZNF248-204ENST00000395873 GRAPQ13588 217 aa28.32■■■□□ 2.12
ZNF248-204ENST00000395873 TSPYL6Q8N831 410 aa28.32■■■□□ 2.12
ZNF248-204ENST00000395873 CCDC191Q8NCU4 936 aa28.32■■■□□ 2.12
ZNF248-204ENST00000395873 GRAPLQ8TC17 118 aaPredicted RBP28.32■■■□□ 2.12
ZNF248-204ENST00000395873 FAM89AQ96GI7 184 aa28.32■■■□□ 2.12
ZNF248-204ENST00000395873 LRRC37AA6NMS7 1700 aa28.32■■■□□ 2.12
ZNF248-204ENST00000395873 TCERG1O14776 1098 aaKnown RBP28.31■■■□□ 2.12
ZNF248-204ENST00000395873 SP8Q8IXZ3 490 aa28.31■■■□□ 2.12
ZNF248-204ENST00000395873 FAM9BQ8IZU0 186 aa28.31■■■□□ 2.12
ZNF248-204ENST00000395873 L3MBTL3Q96JM7 780 aaPredicted RBP28.31■■■□□ 2.12
ZNF248-204ENST00000395873 MYH3P11055 1940 aa28.31■■■□□ 2.12
ZNF248-204ENST00000395873 FZD9O00144 591 aa28.3■■■□□ 2.12
ZNF248-204ENST00000395873 EIF6P56537 245 aaKnown RBP28.3■■■□□ 2.12
ZNF248-204ENST00000395873 ZBTB38Q8NAP3 1195 aaPredicted RBP28.3■■■□□ 2.12
ZNF248-204ENST00000395873 MYD88Q99836 296 aa28.3■■■□□ 2.12
ZNF248-204ENST00000395873 FANCIQ9NVI1 1328 aa28.29■■■□□ 2.12
ZNF248-204ENST00000395873 POTECB2RU33 542 aa28.29■■■□□ 2.12
ZNF248-204ENST00000395873 NEXNQ0ZGT2 675 aa28.29■■■□□ 2.12
ZNF248-204ENST00000395873 SF3B3Q15393 1217 aaKnown RBP28.29■■■□□ 2.12
ZNF248-204ENST00000395873 LARGE2Q8N3Y3 721 aa28.29■■■□□ 2.12
ZNF248-204ENST00000395873 METTL22Q9BUU2 404 aaPredicted RBP28.29■■■□□ 2.12
ZNF248-204ENST00000395873 IRS4O14654 1257 aaPredicted RBP28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms