RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 ANP32EQ9BTT0 268 aa17.48■□□□□ 0.39
CDC42SE2-202ENST00000395246 ASAP1Q9ULH1 1129 aa17.48■□□□□ 0.39
CDC42SE2-202ENST00000395246 ANAPC15P60006 121 aa17.48■□□□□ 0.39
CDC42SE2-202ENST00000395246 RIC3Q7Z5B4 369 aa17.48■□□□□ 0.39
CDC42SE2-202ENST00000395246 EPHA10Q5JZY3 1008 aa17.48■□□□□ 0.39
CDC42SE2-202ENST00000395246 ZNF34Q8IZ26 560 aa17.48■□□□□ 0.39
CDC42SE2-202ENST00000395246 CERKQ8TCT0 537 aa17.48■□□□□ 0.39
CDC42SE2-202ENST00000395246 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
CDC42SE2-202ENST00000395246 STARD3NLO95772 234 aa17.47■□□□□ 0.39
CDC42SE2-202ENST00000395246 EXOC6BQ9Y2D4 811 aa17.46■□□□□ 0.39
CDC42SE2-202ENST00000395246 HSP90AB3PQ58FF7 597 aa17.46■□□□□ 0.39
CDC42SE2-202ENST00000395246 RC3H1Q5TC82 1133 aaKnown RBP17.46■□□□□ 0.39
CDC42SE2-202ENST00000395246 CWC25Q9NXE8 425 aaPredicted RBP17.46■□□□□ 0.39
CDC42SE2-202ENST00000395246 ZBTB47Q9UFB7 747 aaPredicted RBP17.46■□□□□ 0.39
CDC42SE2-202ENST00000395246 SMARCA5O60264 1052 aaPredicted RBP17.46■□□□□ 0.39
CDC42SE2-202ENST00000395246 MYD88Q99836 296 aa17.45■□□□□ 0.38
CDC42SE2-202ENST00000395246 CHMLP26374 656 aa17.45■□□□□ 0.38
CDC42SE2-202ENST00000395246 DDB1Q16531 1140 aa17.45■□□□□ 0.38
CDC42SE2-202ENST00000395246 TTLL7Q6ZT98 887 aa17.45■□□□□ 0.38
CDC42SE2-202ENST00000395246 C9orf78Q9NZ63 289 aaPredicted RBP17.45■□□□□ 0.38
CDC42SE2-202ENST00000395246 USP35Q9P2H5 1018 aa17.45■□□□□ 0.38
CDC42SE2-202ENST00000395246 PALLDQ8WX93 1383 aa17.45■□□□□ 0.38
CDC42SE2-202ENST00000395246 LTBP1Q14766 1721 aa17.45■□□□□ 0.38
CDC42SE2-202ENST00000395246 MAST2Q6P0Q8 1798 aa17.45■□□□□ 0.38
CDC42SE2-202ENST00000395246 SMARCC1Q92922 1105 aaPredicted RBP17.45■□□□□ 0.38
CDC42SE2-202ENST00000395246 ZNF512BQ96KM6 892 aaPredicted RBP17.45■□□□□ 0.38
CDC42SE2-202ENST00000395246 ZBTB38Q8NAP3 1195 aaPredicted RBP17.44■□□□□ 0.38
CDC42SE2-202ENST00000395246 RAD50Q92878 1312 aa17.44■□□□□ 0.38
CDC42SE2-202ENST00000395246 ATG9AQ7Z3C6 839 aa17.44■□□□□ 0.38
CDC42SE2-202ENST00000395246 A1BGP04217 495 aa17.43■□□□□ 0.38
CDC42SE2-202ENST00000395246 CLEC17AQ6ZS10 378 aa17.43■□□□□ 0.38
CDC42SE2-202ENST00000395246 ESYT1Q9BSJ8 1104 aa17.43■□□□□ 0.38
CDC42SE2-202ENST00000395246 MED23Q9ULK4 1368 aa17.43■□□□□ 0.38
CDC42SE2-202ENST00000395246 GLRX3O76003 335 aaKnown RBP17.43■□□□□ 0.38
CDC42SE2-202ENST00000395246 TBC1D2Q9BYX2 928 aa17.43■□□□□ 0.38
CDC42SE2-202ENST00000395246 DDX54Q8TDD1 881 aaKnown RBP17.42■□□□□ 0.38
CDC42SE2-202ENST00000395246 ERC2O15083 957 aa17.42■□□□□ 0.38
CDC42SE2-202ENST00000395246 DNAJC10Q8IXB1 793 aa17.42■□□□□ 0.38
CDC42SE2-202ENST00000395246 MYL6BP14649 208 aa17.41■□□□□ 0.38
CDC42SE2-202ENST00000395246 SURF6O75683 361 aaKnown RBP17.41■□□□□ 0.38
CDC42SE2-202ENST00000395246 ATP5JP18859 108 aa17.41■□□□□ 0.38
CDC42SE2-202ENST00000395246 TIAM2Q8IVF5 1701 aa17.41■□□□□ 0.38
CDC42SE2-202ENST00000395246 REC8O95072 547 aa17.4■□□□□ 0.38
CDC42SE2-202ENST00000395246 ECHDC1Q9NTX5 307 aa17.4■□□□□ 0.38
CDC42SE2-202ENST00000395246 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.4■□□□□ 0.38
CDC42SE2-202ENST00000395246 BECN1Q14457 450 aa17.4■□□□□ 0.38
CDC42SE2-202ENST00000395246 DUOX1Q9NRD9 1551 aa17.4■□□□□ 0.38
CDC42SE2-202ENST00000395246 CLEC4GQ6UXB4 293 aa17.4■□□□□ 0.38
CDC42SE2-202ENST00000395246 NLRP10Q86W26 655 aa17.4■□□□□ 0.38
CDC42SE2-202ENST00000395246 PLEKHG5O94827 1062 aa17.39■□□□□ 0.37
CDC42SE2-202ENST00000395246 ALDH8A1Q9H2A2 487 aaPredicted RBP17.39■□□□□ 0.37
CDC42SE2-202ENST00000395246 COL4A1P02462 1669 aa17.39■□□□□ 0.37
CDC42SE2-202ENST00000395246 SGSM2O43147 1006 aa17.38■□□□□ 0.37
CDC42SE2-202ENST00000395246 RABEP1Q15276 862 aa17.38■□□□□ 0.37
CDC42SE2-202ENST00000395246 CASC1Q6TDU7 716 aa17.38■□□□□ 0.37
CDC42SE2-202ENST00000395246 CAMTA2O94983 1202 aa17.38■□□□□ 0.37
CDC42SE2-202ENST00000395246 TSGA10IPQ3SY00 556 aa17.38■□□□□ 0.37
CDC42SE2-202ENST00000395246 VGLL2Q8N8G2 317 aa17.38■□□□□ 0.37
CDC42SE2-202ENST00000395246 EAF2Q96CJ1 260 aaPredicted RBP17.38■□□□□ 0.37
CDC42SE2-202ENST00000395246 TNRC6CQ9HCJ0 1690 aaKnown RBP17.38■□□□□ 0.37
CDC42SE2-202ENST00000395246 EVI5LQ96CN4 794 aa17.37■□□□□ 0.37
CDC42SE2-202ENST00000395246 CIZ1Q9ULV3 898 aaPredicted RBP17.37■□□□□ 0.37
CDC42SE2-202ENST00000395246 A0A087WZG4 1122 aa17.37■□□□□ 0.37
CDC42SE2-202ENST00000395246 CLASRPQ8N2M8 674 aaKnown RBP17.37■□□□□ 0.37
CDC42SE2-202ENST00000395246 CCDC87Q9NVE4 849 aa17.37■□□□□ 0.37
CDC42SE2-202ENST00000395246 PRIM1P49642 420 aaKnown RBP17.37■□□□□ 0.37
CDC42SE2-202ENST00000395246 UBAP1LF5GYI3 381 aa17.36■□□□□ 0.37
CDC42SE2-202ENST00000395246 HSPA4P34932 840 aa17.36■□□□□ 0.37
CDC42SE2-202ENST00000395246 IL15P40933 162 aaPredicted RBP17.36■□□□□ 0.37
CDC42SE2-202ENST00000395246 HIP1O00291 1037 aa17.36■□□□□ 0.37
CDC42SE2-202ENST00000395246 ITPK1Q13572 414 aa17.36■□□□□ 0.37
CDC42SE2-202ENST00000395246 TNNI3KQ59H18 835 aa17.36■□□□□ 0.37
CDC42SE2-202ENST00000395246 LSG1Q9H089 658 aaKnown RBP17.36■□□□□ 0.37
CDC42SE2-202ENST00000395246 FPGT-TNNI3KV9GXZ4 949 aa17.36■□□□□ 0.37
CDC42SE2-202ENST00000395246 UBN2Q6ZU65 1347 aa17.36■□□□□ 0.37
CDC42SE2-202ENST00000395246 LOC102724428A0A0B4J2F2 783 aa17.35■□□□□ 0.37
CDC42SE2-202ENST00000395246 SIK1P57059 783 aa17.35■□□□□ 0.37
CDC42SE2-202ENST00000395246 USPL1Q5W0Q7 1092 aa17.35■□□□□ 0.37
CDC42SE2-202ENST00000395246 KIF6Q6ZMV9 814 aa17.35■□□□□ 0.37
CDC42SE2-202ENST00000395246 AIMP1Q12904 312 aaKnown RBP17.35■□□□□ 0.37
CDC42SE2-202ENST00000395246 ZNF646O15015 1829 aaPredicted RBP17.35■□□□□ 0.37
CDC42SE2-202ENST00000395246 PARP10Q53GL7 1025 aa17.34■□□□□ 0.37
CDC42SE2-202ENST00000395246 CNTROBQ8N137 903 aa17.34■□□□□ 0.37
CDC42SE2-202ENST00000395246 HAUS7Q99871 368 aa17.34■□□□□ 0.37
CDC42SE2-202ENST00000395246 ZBTB1Q9Y2K1 713 aa17.34■□□□□ 0.37
CDC42SE2-202ENST00000395246 RPAP1Q9BWH6 1393 aaPredicted RBP17.34■□□□□ 0.37
CDC42SE2-202ENST00000395246 SLC10A5Q5PT55 438 aa17.34■□□□□ 0.37
CDC42SE2-202ENST00000395246 UBE3BQ7Z3V4 1068 aa17.33■□□□□ 0.37
CDC42SE2-202ENST00000395246 GPATCH3Q96I76 525 aa17.33■□□□□ 0.37
CDC42SE2-202ENST00000395246 EYA2O00167 538 aa17.33■□□□□ 0.36
CDC42SE2-202ENST00000395246 MFAP1P55081 439 aaKnown RBP17.33■□□□□ 0.36
CDC42SE2-202ENST00000395246 RIPOR2Q9Y4F9 1068 aa17.33■□□□□ 0.36
CDC42SE2-202ENST00000395246 SH3TC1Q8TE82 1336 aa17.32■□□□□ 0.36
CDC42SE2-202ENST00000395246 G3BP1Q13283 466 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDC42SE2-202ENST00000395246 TM6SF1Q9BZW5 370 aa17.32■□□□□ 0.36
CDC42SE2-202ENST00000395246 DLEC1Q9Y238 1755 aa17.32■□□□□ 0.36
CDC42SE2-202ENST00000395246 CRKLP46109 303 aaKnown RBP17.32■□□□□ 0.36
CDC42SE2-202ENST00000395246 GJD4Q96KN9 370 aaPredicted RBP17.32■□□□□ 0.36
CDC42SE2-202ENST00000395246 PA2G4Q9UQ80 394 aaKnown RBP17.32■□□□□ 0.36
CDC42SE2-202ENST00000395246 HLFQ16534 295 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms