RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 BIRC2Q13490 618 aa6.93□□□□□ -1.3
MATR3-230ENST00000394800 PPFIA3O75145 1194 aa6.92□□□□□ -1.3
MATR3-230ENST00000394800 EIF2S2P20042 333 aaKnown RBP6.92□□□□□ -1.3
MATR3-230ENST00000394800 EIF4A1P60842 406 aaKnown RBP6.92□□□□□ -1.3
MATR3-230ENST00000394800 HDGFL1Q5TGJ6 251 aa6.92□□□□□ -1.3
MATR3-230ENST00000394800 DRC1Q96MC2 740 aa6.92□□□□□ -1.3
MATR3-230ENST00000394800 ALS2Q96Q42 1657 aa6.92□□□□□ -1.3
MATR3-230ENST00000394800 CCDC66A2RUB6 948 aa6.92□□□□□ -1.3
MATR3-230ENST00000394800 MKRN3Q13064 507 aaKnown RBP6.92□□□□□ -1.3
MATR3-230ENST00000394800 GRIPAP1Q4V328 841 aa6.92□□□□□ -1.3
MATR3-230ENST00000394800 PLEKHM2Q8IWE5 1019 aa6.92□□□□□ -1.3
MATR3-230ENST00000394800 CALR3Q96L12 384 aaKnown RBP6.92□□□□□ -1.3
MATR3-230ENST00000394800 RNF216Q9NWF9 866 aaPredicted RBP6.92□□□□□ -1.3
MATR3-230ENST00000394800 RIPOR2Q9Y4F9 1068 aa6.92□□□□□ -1.3
MATR3-230ENST00000394800 NCAPD2Q15021 1401 aa6.92□□□□□ -1.3
MATR3-230ENST00000394800 TBC1D2Q9BYX2 928 aa6.92□□□□□ -1.3
MATR3-230ENST00000394800 XIRP1Q702N8 1843 aaKnown RBP6.92□□□□□ -1.3
MATR3-230ENST00000394800 PNMA6EA0A0J9YXQ4 647 aa6.92□□□□□ -1.3
MATR3-230ENST00000394800 BMP2KLQ5H9B9 411 aa6.92□□□□□ -1.3
MATR3-230ENST00000394800 RGS22Q8NE09 1264 aa6.92□□□□□ -1.3
MATR3-230ENST00000394800 ATF3P18847 181 aa6.91□□□□□ -1.3
MATR3-230ENST00000394800 NBPF5PQ86XG9 351 aaPredicted RBP6.91□□□□□ -1.3
MATR3-230ENST00000394800 STK31Q9BXU1 1019 aa6.91□□□□□ -1.3
MATR3-230ENST00000394800 C22orf23Q9BZE7 217 aa6.91□□□□□ -1.3
MATR3-230ENST00000394800 USP44Q9H0E7 712 aa6.91□□□□□ -1.3
MATR3-230ENST00000394800 CCDC85CA6NKD9 419 aa6.91□□□□□ -1.3
MATR3-230ENST00000394800 SLKQ9H2G2 1235 aaPredicted RBP6.91□□□□□ -1.3
MATR3-230ENST00000394800 ZNHIT6Q9NWK9 470 aaKnown RBP6.91□□□□□ -1.3
MATR3-230ENST00000394800 EXOC6BQ9Y2D4 811 aa6.91□□□□□ -1.3
MATR3-230ENST00000394800 KAT6BQ8WYB5 2073 aa6.91□□□□□ -1.3
MATR3-230ENST00000394800 CCDC30Q5VVM6 783 aa6.91□□□□□ -1.3
MATR3-230ENST00000394800 PROSER3Q2NL68 480 aa6.91□□□□□ -1.3
MATR3-230ENST00000394800 CHPF2Q9P2E5 772 aa6.91□□□□□ -1.3
MATR3-230ENST00000394800 RIOK3O14730 519 aaKnown RBP6.9□□□□□ -1.3
MATR3-230ENST00000394800 AKAP4Q5JQC9 854 aa6.9□□□□□ -1.3
MATR3-230ENST00000394800 TBC1D9Q6ZT07 1266 aa6.9□□□□□ -1.3
MATR3-230ENST00000394800 RPAP2Q8IXW5 612 aaPredicted RBP6.9□□□□□ -1.3
MATR3-230ENST00000394800 KDM3BQ7LBC6 1761 aa6.9□□□□□ -1.3
MATR3-230ENST00000394800 LIG1P18858 919 aa6.9□□□□□ -1.3
MATR3-230ENST00000394800 TEFQ10587 303 aa6.9□□□□□ -1.3
MATR3-230ENST00000394800 NFKBIBQ15653 356 aa6.9□□□□□ -1.3
MATR3-230ENST00000394800 TSHZ3Q63HK5 1081 aa6.9□□□□□ -1.3
MATR3-230ENST00000394800 DYDC1Q8WWB3 177 aa6.9□□□□□ -1.3
MATR3-230ENST00000394800 LMO7Q8WWI1 1683 aa6.9□□□□□ -1.3
MATR3-230ENST00000394800 KDM4FA0A1W2PPD8 638 aa6.9□□□□□ -1.3
MATR3-230ENST00000394800 RNMTO43148 476 aaKnown RBP6.9□□□□□ -1.31
MATR3-230ENST00000394800 ZNF500O60304 480 aaPredicted RBP6.9□□□□□ -1.31
MATR3-230ENST00000394800 GRM1Q13255 1194 aa6.9□□□□□ -1.31
MATR3-230ENST00000394800 KRBA2Q6ZNG9 492 aa6.9□□□□□ -1.31
MATR3-230ENST00000394800 KIF2CQ99661 725 aa6.9□□□□□ -1.31
MATR3-230ENST00000394800 IVNS1ABPQ9Y6Y0 642 aa6.9□□□□□ -1.31
MATR3-230ENST00000394800 COL18A1P39060 1754 aa6.9□□□□□ -1.31
MATR3-230ENST00000394800 CARNS1A5YM72 827 aa6.9□□□□□ -1.31
MATR3-230ENST00000394800 BTBD11A6QL63 1104 aa6.9□□□□□ -1.31
MATR3-230ENST00000394800 FRAT2O75474 233 aaPredicted RBP6.9□□□□□ -1.31
MATR3-230ENST00000394800 SLC39A6Q13433 755 aa6.9□□□□□ -1.31
MATR3-230ENST00000394800 TSPYL1Q9H0U9 437 aa6.9□□□□□ -1.31
MATR3-230ENST00000394800 GOLGB1Q14789 3259 aaKnown RBP6.9□□□□□ -1.31
MATR3-230ENST00000394800 GOLGA6CA6NDK9 693 aa6.89□□□□□ -1.31
MATR3-230ENST00000394800 GOLGA6BA6NDN3 693 aa6.89□□□□□ -1.31
MATR3-230ENST00000394800 CREB3O43889 395 aa6.89□□□□□ -1.31
MATR3-230ENST00000394800 NBPF7P0C2Y1 421 aaPredicted RBP6.89□□□□□ -1.31
MATR3-230ENST00000394800 GOLGA6DP0CG33 693 aa6.89□□□□□ -1.31
MATR3-230ENST00000394800 ATRIPQ8WXE1 791 aa6.89□□□□□ -1.31
MATR3-230ENST00000394800 RBM42Q9BTD8 480 aaKnown RBP6.89□□□□□ -1.31
MATR3-230ENST00000394800 ANTXR1Q9H6X2 564 aa6.89□□□□□ -1.31
MATR3-230ENST00000394800 NLRP2Q9NX02 1062 aa6.89□□□□□ -1.31
MATR3-230ENST00000394800 GOLGA6AQ9NYA3 693 aa6.89□□□□□ -1.31
MATR3-230ENST00000394800 CRYBG1Q9Y4K1 1723 aa6.89□□□□□ -1.31
MATR3-230ENST00000394800 STRCQ7RTU9 1775 aa6.89□□□□□ -1.31
MATR3-230ENST00000394800 PI4KAP2A4QPH2 592 aa6.89□□□□□ -1.31
MATR3-230ENST00000394800 GTF2A1P52655 376 aaPredicted RBP6.89□□□□□ -1.31
MATR3-230ENST00000394800 PLEKHO1Q53GL0 409 aaPredicted RBP6.89□□□□□ -1.31
MATR3-230ENST00000394800 TAX1BP1Q86VP1 789 aa6.89□□□□□ -1.31
MATR3-230ENST00000394800 PI4KAP1Q8N8J0 262 aa6.89□□□□□ -1.31
MATR3-230ENST00000394800 LRRFIP2Q9Y608 721 aaKnown RBP6.89□□□□□ -1.31
MATR3-230ENST00000394800 ZNF335Q9H4Z2 1342 aaPredicted RBP6.89□□□□□ -1.31
MATR3-230ENST00000394800 CD2BP2O95400 341 aaKnown RBP6.89□□□□□ -1.31
MATR3-230ENST00000394800 CCT4P50991 539 aaKnown RBP6.89□□□□□ -1.31
MATR3-230ENST00000394800 SF3A1Q15459 793 aaKnown RBP6.89□□□□□ -1.31
MATR3-230ENST00000394800 CADPS2Q86UW7 1296 aa6.89□□□□□ -1.31
MATR3-230ENST00000394800 FLCNQ8NFG4 579 aa6.89□□□□□ -1.31
MATR3-230ENST00000394800 TMA7Q9Y2S6 64 aaKnown RBP6.89□□□□□ -1.31
MATR3-230ENST00000394800 GIGYF1O75420 1035 aaPredicted RBP6.89□□□□□ -1.31
MATR3-230ENST00000394800 MAP4K4O95819 1239 aaPredicted RBP6.89□□□□□ -1.31
MATR3-230ENST00000394800 MEGF6O75095 1541 aa6.88□□□□□ -1.31
MATR3-230ENST00000394800 BRINP3Q76B58 766 aa6.88□□□□□ -1.31
MATR3-230ENST00000394800 BABAM1Q9NWV8 329 aa6.88□□□□□ -1.31
MATR3-230ENST00000394800 KIF1AQ12756 1690 aa6.88□□□□□ -1.31
MATR3-230ENST00000394800 UIMC1Q96RL1 719 aa6.88□□□□□ -1.31
MATR3-230ENST00000394800 SIPA1L3O60292 1781 aaPredicted RBP6.88□□□□□ -1.31
MATR3-230ENST00000394800 RAB11FIP3O75154 756 aa6.88□□□□□ -1.31
MATR3-230ENST00000394800 TSNAXIP1Q2TAA8 658 aa6.88□□□□□ -1.31
MATR3-230ENST00000394800 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.88□□□□□ -1.31
MATR3-230ENST00000394800 CWC15Q9P013 229 aaKnown RBP6.88□□□□□ -1.31
MATR3-230ENST00000394800 CAMTA1Q9Y6Y1 1673 aa6.88□□□□□ -1.31
MATR3-230ENST00000394800 EP400Q96L91 3159 aa6.88□□□□□ -1.31
MATR3-230ENST00000394800 GNAI2P04899 355 aa6.88□□□□□ -1.31
MATR3-230ENST00000394800 AMOTQ4VCS5 1084 aa6.88□□□□□ -1.31
MATR3-230ENST00000394800 MPP4Q96JB8 637 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms