RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 TTC14Q96N46 770 aa19.87■□□□□ 0.77
SIPA1-201ENST00000394224 HOXC9P31274 260 aa19.86■□□□□ 0.77
SIPA1-201ENST00000394224 ST3GAL1Q11201 340 aa19.86■□□□□ 0.77
SIPA1-201ENST00000394224 BECN2A8MW95 431 aa19.86■□□□□ 0.77
SIPA1-201ENST00000394224 BICC1Q9H694 974 aaKnown RBP19.86■□□□□ 0.77
SIPA1-201ENST00000394224 PRDM4Q9UKN5 801 aa19.86■□□□□ 0.77
SIPA1-201ENST00000394224 ERICH4A6NGS2 130 aa19.85■□□□□ 0.77
SIPA1-201ENST00000394224 FAM177A1Q8N128 213 aaPredicted RBP19.85■□□□□ 0.77
SIPA1-201ENST00000394224 CLIP2Q9UDT6 1046 aa19.85■□□□□ 0.77
SIPA1-201ENST00000394224 KIAA0232Q92628 1395 aa19.85■□□□□ 0.77
SIPA1-201ENST00000394224 GOLGA6L6A8MZA4 724 aa19.85■□□□□ 0.77
SIPA1-201ENST00000394224 GOLGA6L19H0YKK7 550 aa19.85■□□□□ 0.77
SIPA1-201ENST00000394224 CPSF1Q10570 1443 aaKnown RBP19.85■□□□□ 0.77
SIPA1-201ENST00000394224 BRF1Q92994 677 aa19.84■□□□□ 0.77
SIPA1-201ENST00000394224 GPATCH3Q96I76 525 aa19.84■□□□□ 0.77
SIPA1-201ENST00000394224 STAP2Q9UGK3 403 aa19.84■□□□□ 0.77
SIPA1-201ENST00000394224 CDK12Q9NYV4 1490 aaPredicted RBP19.84■□□□□ 0.77
SIPA1-201ENST00000394224 HMGN5P82970 282 aaKnown RBP19.84■□□□□ 0.77
SIPA1-201ENST00000394224 ESCO1Q5FWF5 840 aa19.83■□□□□ 0.77
SIPA1-201ENST00000394224 MRVI1Q9Y6F6 885 aa19.83■□□□□ 0.77
SIPA1-201ENST00000394224 KIAA1524Q8TCG1 905 aa19.83■□□□□ 0.77
SIPA1-201ENST00000394224 LMTK2Q8IWU2 1503 aa19.83■□□□□ 0.76
SIPA1-201ENST00000394224 A0A0G2JLW4 131 aa19.83■□□□□ 0.76
SIPA1-201ENST00000394224 USP27XA6NNY8 438 aa19.83■□□□□ 0.76
SIPA1-201ENST00000394224 HDGFP51858 240 aaKnown RBP19.83■□□□□ 0.76
SIPA1-201ENST00000394224 ZC3H6P61129 1189 aaKnown RBP19.83■□□□□ 0.76
SIPA1-201ENST00000394224 SUCLG2Q96I99 432 aa19.83■□□□□ 0.76
SIPA1-201ENST00000394224 HECW2Q9P2P5 1572 aa19.83■□□□□ 0.76
SIPA1-201ENST00000394224 SLC27A2O14975 620 aa19.82■□□□□ 0.76
SIPA1-201ENST00000394224 BEND3Q5T5X7 828 aa19.82■□□□□ 0.76
SIPA1-201ENST00000394224 GJB4Q9NTQ9 266 aa19.82■□□□□ 0.76
SIPA1-201ENST00000394224 AATKQ6ZMQ8 1374 aa19.81■□□□□ 0.76
SIPA1-201ENST00000394224 CCDC171Q6TFL3 1326 aa19.81■□□□□ 0.76
SIPA1-201ENST00000394224 HAND2P61296 217 aa19.81■□□□□ 0.76
SIPA1-201ENST00000394224 PSME1Q06323 249 aa19.81■□□□□ 0.76
SIPA1-201ENST00000394224 POLR3DP05423 398 aaPredicted RBP19.81■□□□□ 0.76
SIPA1-201ENST00000394224 ME1P48163 572 aa19.81■□□□□ 0.76
SIPA1-201ENST00000394224 CCDC144BQ3MJ40 725 aa19.81■□□□□ 0.76
SIPA1-201ENST00000394224 CCDC144CPQ8IYA2 1237 aa19.81■□□□□ 0.76
SIPA1-201ENST00000394224 FAM200AQ8TCP9 573 aa19.81■□□□□ 0.76
SIPA1-201ENST00000394224 RIMS1Q86UR5 1692 aaKnown RBP19.8■□□□□ 0.76
SIPA1-201ENST00000394224 C1orf141Q5JVX7 400 aa19.8■□□□□ 0.76
SIPA1-201ENST00000394224 SNRKQ9NRH2 765 aa19.8■□□□□ 0.76
SIPA1-201ENST00000394224 ATP7BP35670 1465 aa19.8■□□□□ 0.76
SIPA1-201ENST00000394224 CACTINQ8WUQ7 758 aaKnown RBP19.8■□□□□ 0.76
SIPA1-201ENST00000394224 MYD88Q99836 296 aa19.8■□□□□ 0.76
SIPA1-201ENST00000394224 EID1Q9Y6B2 187 aa19.8■□□□□ 0.76
SIPA1-201ENST00000394224 USP32Q8NFA0 1604 aa19.8■□□□□ 0.76
SIPA1-201ENST00000394224 Q6ZUG5 572 aa19.8■□□□□ 0.76
SIPA1-201ENST00000394224 ZBTB22O15209 634 aa19.79■□□□□ 0.76
SIPA1-201ENST00000394224 EIF4A1P60842 406 aaKnown RBP19.79■□□□□ 0.76
SIPA1-201ENST00000394224 CGNQ9P2M7 1197 aaKnown RBP19.79■□□□□ 0.76
SIPA1-201ENST00000394224 FLT4P35916 1363 aa19.79■□□□□ 0.76
SIPA1-201ENST00000394224 KIF24Q5T7B8 1368 aa19.79■□□□□ 0.76
SIPA1-201ENST00000394224 DLG5Q8TDM6 1919 aa19.79■□□□□ 0.76
SIPA1-201ENST00000394224 SDF4Q9BRK5 362 aa19.78■□□□□ 0.76
SIPA1-201ENST00000394224 SASH1O94885 1247 aa19.78■□□□□ 0.76
SIPA1-201ENST00000394224 APOBRQ0VD83 1088 aa19.78■□□□□ 0.76
SIPA1-201ENST00000394224 CCDC112Q8NEF3 446 aa19.78■□□□□ 0.76
SIPA1-201ENST00000394224 LEO1Q8WVC0 666 aaPredicted RBP19.78■□□□□ 0.76
SIPA1-201ENST00000394224 PRIMPOLQ96LW4 560 aa19.78■□□□□ 0.76
SIPA1-201ENST00000394224 ZRSR1Q15695 479 aaKnown RBP19.78■□□□□ 0.76
SIPA1-201ENST00000394224 UVSSAQ2YD98 709 aa19.78■□□□□ 0.76
SIPA1-201ENST00000394224 GPHNQ9NQX3 736 aaPredicted RBP19.78■□□□□ 0.76
SIPA1-201ENST00000394224 ARAP3Q8WWN8 1544 aa19.78■□□□□ 0.76
SIPA1-201ENST00000394224 LETM1O95202 739 aaPredicted RBP19.77■□□□□ 0.76
SIPA1-201ENST00000394224 C11orf57Q6ZUT1 292 aaPredicted RBP19.77■□□□□ 0.76
SIPA1-201ENST00000394224 SRCAPQ6ZRS2 3230 aa19.77■□□□□ 0.76
SIPA1-201ENST00000394224 ZSCAN20P17040 1043 aaPredicted RBP19.77■□□□□ 0.76
SIPA1-201ENST00000394224 KCNA6P17658 529 aa19.77■□□□□ 0.76
SIPA1-201ENST00000394224 VPS53Q5VIR6 699 aa19.77■□□□□ 0.76
SIPA1-201ENST00000394224 UBE3BQ7Z3V4 1068 aa19.77■□□□□ 0.76
SIPA1-201ENST00000394224 ST7Q9NRC1 585 aa19.77■□□□□ 0.76
SIPA1-201ENST00000394224 PGBD1Q96JS3 809 aa19.77■□□□□ 0.75
SIPA1-201ENST00000394224 SMC2O95347 1197 aa19.76■□□□□ 0.75
SIPA1-201ENST00000394224 TERF1P54274 439 aa19.76■□□□□ 0.75
SIPA1-201ENST00000394224 SF3A1Q15459 793 aaKnown RBP19.76■□□□□ 0.75
SIPA1-201ENST00000394224 EPHA10Q5JZY3 1008 aa19.76■□□□□ 0.75
SIPA1-201ENST00000394224 ZSWIM6Q9HCJ5 1215 aa19.76■□□□□ 0.75
SIPA1-201ENST00000394224 MAP3K5Q99683 1374 aa19.75■□□□□ 0.75
SIPA1-201ENST00000394224 A2ML1A8K2U0 1454 aa19.75■□□□□ 0.75
SIPA1-201ENST00000394224 EVI5LQ96CN4 794 aa19.75■□□□□ 0.75
SIPA1-201ENST00000394224 GOLGA8FQ08AF8 430 aa19.75■□□□□ 0.75
SIPA1-201ENST00000394224 GOLGA8DPQ0D2H9 430 aa19.75■□□□□ 0.75
SIPA1-201ENST00000394224 ZSCAN25Q6NSZ9 544 aa19.75■□□□□ 0.75
SIPA1-201ENST00000394224 A0A1B0GVL5 298 aa19.75■□□□□ 0.75
SIPA1-201ENST00000394224 TIMM10P62072 90 aa19.75■□□□□ 0.75
SIPA1-201ENST00000394224 RNF20Q5VTR2 975 aa19.75■□□□□ 0.75
SIPA1-201ENST00000394224 CEP170BQ9Y4F5 1589 aaPredicted RBP19.74■□□□□ 0.75
SIPA1-201ENST00000394224 A0A0G2JS52 829 aa19.74■□□□□ 0.75
SIPA1-201ENST00000394224 HSP90AB4PQ58FF6 505 aa19.74■□□□□ 0.75
SIPA1-201ENST00000394224 CCAR1Q8IX12 1150 aaKnown RBP19.74■□□□□ 0.75
SIPA1-201ENST00000394224 GOLIM4O00461 696 aa19.74■□□□□ 0.75
SIPA1-201ENST00000394224 TFCP2Q12800 502 aa19.74■□□□□ 0.75
SIPA1-201ENST00000394224 NECTIN1Q15223 517 aa19.74■□□□□ 0.75
SIPA1-201ENST00000394224 MTERF4Q7Z6M4 381 aaKnown RBP19.74■□□□□ 0.75
SIPA1-201ENST00000394224 RXRAP19793 462 aa19.74■□□□□ 0.75
SIPA1-201ENST00000394224 ZFP91Q96JP5 570 aaPredicted RBP19.74■□□□□ 0.75
SIPA1-201ENST00000394224 SKILP12757 684 aa19.73■□□□□ 0.75
SIPA1-201ENST00000394224 COPS6Q7L5N1 327 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms