RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 TMEM57Q8N5G2 664 aa10.34□□□□□ -0.75
CHD2-201ENST00000394196 OPTNQ96CV9 577 aa10.34□□□□□ -0.75
CHD2-201ENST00000394196 JADE2Q9NQC1 790 aa10.34□□□□□ -0.75
CHD2-201ENST00000394196 RASSF2P50749 326 aa10.34□□□□□ -0.75
CHD2-201ENST00000394196 SATB1Q01826 763 aa10.34□□□□□ -0.75
CHD2-201ENST00000394196 IKBKGQ9Y6K9 419 aa10.34□□□□□ -0.75
CHD2-201ENST00000394196 PRPHP41219 470 aa10.33□□□□□ -0.76
CHD2-201ENST00000394196 XPCQ01831 940 aaPredicted RBP10.33□□□□□ -0.76
CHD2-201ENST00000394196 SDCCAG8Q86SQ7 713 aaPredicted RBP10.33□□□□□ -0.76
CHD2-201ENST00000394196 HOMER2Q9NSB8 354 aa10.33□□□□□ -0.76
CHD2-201ENST00000394196 NOP14P78316 857 aaKnown RBP10.33□□□□□ -0.76
CHD2-201ENST00000394196 KLHL40Q2TBA0 621 aa10.33□□□□□ -0.76
CHD2-201ENST00000394196 NBPF7P0C2Y1 421 aaPredicted RBP10.33□□□□□ -0.76
CHD2-201ENST00000394196 FAM76AQ8TAV0 307 aa10.33□□□□□ -0.76
CHD2-201ENST00000394196 MICAL1Q8TDZ2 1067 aa10.33□□□□□ -0.76
CHD2-201ENST00000394196 NUF2Q9BZD4 464 aa10.33□□□□□ -0.76
CHD2-201ENST00000394196 NUB1Q9Y5A7 615 aa10.33□□□□□ -0.76
CHD2-201ENST00000394196 CCT4P50991 539 aaKnown RBP10.33□□□□□ -0.76
CHD2-201ENST00000394196 CCDC178Q5BJE1 867 aa10.33□□□□□ -0.76
CHD2-201ENST00000394196 RNF10Q8N5U6 811 aaKnown RBP10.33□□□□□ -0.76
CHD2-201ENST00000394196 UBA5Q9GZZ9 404 aa10.33□□□□□ -0.76
CHD2-201ENST00000394196 KRBA2Q6ZNG9 492 aa10.33□□□□□ -0.76
CHD2-201ENST00000394196 NACAP1Q9BZK3 213 aa10.33□□□□□ -0.76
CHD2-201ENST00000394196 AMOTQ4VCS5 1084 aa10.33□□□□□ -0.76
CHD2-201ENST00000394196 SELENOOQ9BVL4 669 aa10.33□□□□□ -0.76
CHD2-201ENST00000394196 SLU7O95391 586 aaKnown RBP10.32□□□□□ -0.76
CHD2-201ENST00000394196 SSBP05455 408 aaKnown RBP eCLIP10.32□□□□□ -0.76
CHD2-201ENST00000394196 LARP1Q6PKG0 1096 aaKnown RBP10.32□□□□□ -0.76
CHD2-201ENST00000394196 GOLGA1Q92805 767 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 SCINQ9Y6U3 715 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 PEX19P40855 299 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 CCDC77Q9BR77 488 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.32□□□□□ -0.76
CHD2-201ENST00000394196 BICDL2A1A5D9 508 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 ANGPT1Q15389 498 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 NGDNQ8NEJ9 315 aaKnown RBP10.32□□□□□ -0.76
CHD2-201ENST00000394196 MPP4Q96JB8 637 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 TSNARE1Q96NA8 513 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 TROVE2P10155 538 aaKnown RBP eCLIP10.32□□□□□ -0.76
CHD2-201ENST00000394196 COG7P83436 770 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 HDXQ7Z353 690 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 CROCCP2Q86T23 111 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 SMIM24O75264 130 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 RAB3IPQ96QF0 476 aaPredicted RBP10.32□□□□□ -0.76
CHD2-201ENST00000394196 CTAGE1Q96RT6 745 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 E9PMD0 336 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 ADCY5O95622 1261 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 PHLDB3Q6NSJ2 640 aa10.32□□□□□ -0.76
CHD2-201ENST00000394196 SPDYE4A6NLX3 237 aa10.31□□□□□ -0.76
CHD2-201ENST00000394196 UBE2HP62256 183 aa10.31□□□□□ -0.76
CHD2-201ENST00000394196 FOSBP53539 338 aa10.31□□□□□ -0.76
CHD2-201ENST00000394196 MAATS1Q7Z4T9 603 aa10.31□□□□□ -0.76
CHD2-201ENST00000394196 RASAL2Q9UJF2 1139 aa10.31□□□□□ -0.76
CHD2-201ENST00000394196 EIF4G1Q04637 1599 aaKnown RBP10.31□□□□□ -0.76
CHD2-201ENST00000394196 CCDC129Q6ZRS4 1044 aa10.31□□□□□ -0.76
CHD2-201ENST00000394196 SENP3Q9H4L4 574 aaPredicted RBP10.31□□□□□ -0.76
CHD2-201ENST00000394196 CCDC69A6NI79 296 aa10.31□□□□□ -0.76
CHD2-201ENST00000394196 FLOT2Q14254 428 aa10.31□□□□□ -0.76
CHD2-201ENST00000394196 ZKSCAN5Q9Y2L8 839 aa10.31□□□□□ -0.76
CHD2-201ENST00000394196 CUX1P39880 1505 aa10.31□□□□□ -0.76
CHD2-201ENST00000394196 PPP1R12AO14974 1030 aaPredicted RBP10.31□□□□□ -0.76
CHD2-201ENST00000394196 PLCB1Q9NQ66 1216 aa10.31□□□□□ -0.76
CHD2-201ENST00000394196 RAB34Q9BZG1 259 aa10.31□□□□□ -0.76
CHD2-201ENST00000394196 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.31□□□□□ -0.762e-6■■■□□ 16.7
CHD2-201ENST00000394196 KIF2CQ99661 725 aa10.31□□□□□ -0.76
CHD2-201ENST00000394196 HVCN1Q96D96 273 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 SELENOSQ9BQE4 189 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 CHCHD3Q9NX63 227 aaKnown RBP10.3□□□□□ -0.76
CHD2-201ENST00000394196 TBC1D10BQ4KMP7 808 aaPredicted RBP10.3□□□□□ -0.76
CHD2-201ENST00000394196 CEP85LQ5SZL2 805 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 CHD1LQ86WJ1 897 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 A0A1W2PRG0 241 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 NOLC1Q14978 699 aaKnown RBP eCLIP10.3□□□□□ -0.76
CHD2-201ENST00000394196 ISM2Q6H9L7 571 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 HEATR3Q7Z4Q2 680 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 TTC12Q9H892 705 aaPredicted RBP10.3□□□□□ -0.76
CHD2-201ENST00000394196 ARHGEF9O43307 516 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 CETN1Q12798 172 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 JAKMIP2Q96AA8 810 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 ATP5DP30049 168 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 PAWRQ96IZ0 340 aaKnown RBP10.3□□□□□ -0.76
CHD2-201ENST00000394196 NUP88Q99567 741 aaPredicted RBP10.3□□□□□ -0.76
CHD2-201ENST00000394196 PDRG1Q9NUG6 133 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 MRFAP1Q9Y605 127 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 CTAGE15A4D2H0 777 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 SH3BP5O60239 455 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 CTAGE8P0CG41 777 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 ERCC6LQ2NKX8 1250 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 CTAGE4Q8IX94 777 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 RPGRIP1Q96KN7 1286 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 PANK1Q8TE04 598 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 NEK1Q96PY6 1258 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 BIRC2Q13490 618 aa10.3□□□□□ -0.76
CHD2-201ENST00000394196 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.3□□□□□ -0.764e-8■■■□□ 19.2
CHD2-201ENST00000394196 NACADO15069 1562 aa10.29□□□□□ -0.76
CHD2-201ENST00000394196 LRSAM1Q6UWE0 723 aa10.29□□□□□ -0.76
CHD2-201ENST00000394196 PPP1R21Q6ZMI0 780 aa10.29□□□□□ -0.76
CHD2-201ENST00000394196 CCDC63Q8NA47 563 aa10.29□□□□□ -0.76
CHD2-201ENST00000394196 LMNB2Q03252 620 aa10.29□□□□□ -0.76
CHD2-201ENST00000394196 ELL2O00472 640 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms