RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 RABL6Q3YEC7 729 aaPredicted RBP28.3■■■□□ 2.12
RARA-204ENST00000394089 EPHA10Q5JZY3 1008 aa28.3■■■□□ 2.12
RARA-204ENST00000394089 AOX1Q06278 1338 aa28.29■■■□□ 2.12
RARA-204ENST00000394089 TCIRG1Q13488 830 aa28.29■■■□□ 2.12
RARA-204ENST00000394089 TBC1D9Q6ZT07 1266 aa28.29■■■□□ 2.12
RARA-204ENST00000394089 TRIM28Q13263 835 aaKnown RBP28.28■■■□□ 2.12
RARA-204ENST00000394089 SMARCC1Q92922 1105 aaPredicted RBP28.28■■■□□ 2.12
RARA-204ENST00000394089 MFAP1P55081 439 aaKnown RBP28.28■■■□□ 2.12
RARA-204ENST00000394089 IL1RAPL2Q9NP60 686 aa28.28■■■□□ 2.12
RARA-204ENST00000394089 MAP3K15Q6ZN16 1313 aa28.28■■■□□ 2.12
RARA-204ENST00000394089 A0A0G2JS52 829 aa28.27■■■□□ 2.12
RARA-204ENST00000394089 ESPNB1AK53 854 aa28.27■■■□□ 2.12
RARA-204ENST00000394089 TRAK2O60296 914 aa28.27■■■□□ 2.12
RARA-204ENST00000394089 TPM2P07951 284 aa28.27■■■□□ 2.12
RARA-204ENST00000394089 SDSP20132 328 aa28.27■■■□□ 2.12
RARA-204ENST00000394089 OS9Q13438 667 aaPredicted RBP28.27■■■□□ 2.12
RARA-204ENST00000394089 ZBTB1Q9Y2K1 713 aa28.27■■■□□ 2.12
RARA-204ENST00000394089 IL6STP40189 918 aaPredicted RBP28.26■■■□□ 2.12
RARA-204ENST00000394089 ZNF330Q9Y3S2 320 aaPredicted RBP28.26■■■□□ 2.12
RARA-204ENST00000394089 PA2G4Q9UQ80 394 aaKnown RBP28.26■■■□□ 2.11
RARA-204ENST00000394089 PALLDQ8WX93 1383 aa28.25■■■□□ 2.11
RARA-204ENST00000394089 LOC102724428A0A0B4J2F2 783 aa28.25■■■□□ 2.11
RARA-204ENST00000394089 DDX11L8A8MPP1 907 aa28.25■■■□□ 2.11
RARA-204ENST00000394089 SIK1P57059 783 aa28.25■■■□□ 2.11
RARA-204ENST00000394089 JARID2Q92833 1246 aaPredicted RBP28.25■■■□□ 2.11
RARA-204ENST00000394089 AFF2P51816 1311 aa28.24■■■□□ 2.11
RARA-204ENST00000394089 C22orf23Q9BZE7 217 aa28.24■■■□□ 2.11
RARA-204ENST00000394089 GRPEL1Q9HAV7 217 aa28.24■■■□□ 2.11
RARA-204ENST00000394089 KCNQ2O43526 872 aa28.23■■■□□ 2.11
RARA-204ENST00000394089 ATP6V1AP38606 617 aa28.23■■■□□ 2.11
RARA-204ENST00000394089 G3BP1Q13283 466 aaKnown RBP eCLIP28.23■■■□□ 2.11
RARA-204ENST00000394089 GIGYF2Q6Y7W6 1299 aaKnown RBP28.23■■■□□ 2.11
RARA-204ENST00000394089 GJD4Q96KN9 370 aaPredicted RBP28.23■■■□□ 2.11
RARA-204ENST00000394089 COPRSQ9NQ92 184 aa28.23■■■□□ 2.11
RARA-204ENST00000394089 RREB1Q92766 1687 aa28.22■■■□□ 2.11
RARA-204ENST00000394089 HSP90AB3PQ58FF7 597 aa28.22■■■□□ 2.11
RARA-204ENST00000394089 ATRNO75882 1429 aa28.22■■■□□ 2.11
RARA-204ENST00000394089 RFX5P48382 616 aaPredicted RBP28.21■■■□□ 2.11
RARA-204ENST00000394089 FOXO4P98177 505 aa28.21■■■□□ 2.11
RARA-204ENST00000394089 CLASRPQ8N2M8 674 aaKnown RBP28.21■■■□□ 2.11
RARA-204ENST00000394089 CCDC87Q9NVE4 849 aa28.21■■■□□ 2.11
RARA-204ENST00000394089 ZNF831Q5JPB2 1677 aa28.21■■■□□ 2.11
RARA-204ENST00000394089 TUBGCP6Q96RT7 1819 aa28.21■■■□□ 2.11
RARA-204ENST00000394089 USP42Q9H9J4 1324 aaKnown RBP28.21■■■□□ 2.11
RARA-204ENST00000394089 INTS5Q6P9B9 1019 aaKnown RBP28.21■■■□□ 2.11
RARA-204ENST00000394089 NUTM1Q86Y26 1132 aa28.21■■■□□ 2.11
RARA-204ENST00000394089 ERVV-1B6SEH8 477 aa28.2■■■□□ 2.11
RARA-204ENST00000394089 EIF5P55010 431 aaKnown RBP28.19■■■□□ 2.1
RARA-204ENST00000394089 ITPK1Q13572 414 aa28.19■■■□□ 2.1
RARA-204ENST00000394089 TSHZ3Q63HK5 1081 aa28.19■■■□□ 2.1
RARA-204ENST00000394089 CASC1Q6TDU7 716 aa28.19■■■□□ 2.1
RARA-204ENST00000394089 ONECUT3O60422 494 aaPredicted RBP28.18■■■□□ 2.1
RARA-204ENST00000394089 SASH1O94885 1247 aa28.18■■■□□ 2.1
RARA-204ENST00000394089 TRPC5Q9UL62 973 aaPredicted RBP28.18■■■□□ 2.1
RARA-204ENST00000394089 CRKLP46109 303 aaKnown RBP28.18■■■□□ 2.1
RARA-204ENST00000394089 DDIT3P35638 169 aa28.17■■■□□ 2.1
RARA-204ENST00000394089 RBM25P49756 843 aaKnown RBP28.17■■■□□ 2.1
RARA-204ENST00000394089 PTPN12Q05209 780 aaKnown RBP28.17■■■□□ 2.1
RARA-204ENST00000394089 HLFQ16534 295 aa28.17■■■□□ 2.1
RARA-204ENST00000394089 LMBR1LQ6UX01 489 aa28.17■■■□□ 2.1
RARA-204ENST00000394089 ARXQ96QS3 562 aa28.17■■■□□ 2.1
RARA-204ENST00000394089 TTC41PQ6P2S7 1318 aa28.17■■■□□ 2.1
RARA-204ENST00000394089 PCCAP05165 728 aaPredicted RBP28.16■■■□□ 2.1
RARA-204ENST00000394089 DZIP3Q86Y13 1208 aaKnown RBP28.16■■■□□ 2.1
RARA-204ENST00000394089 PI4K2BQ8TCG2 481 aa28.16■■■□□ 2.1
RARA-204ENST00000394089 PDCL3Q9H2J4 239 aa28.15■■■□□ 2.1
RARA-204ENST00000394089 ANKRD36CQ5JPF3 1778 aa28.15■■■□□ 2.1
RARA-204ENST00000394089 ZBTB38Q8NAP3 1195 aaPredicted RBP28.14■■■□□ 2.1
RARA-204ENST00000394089 KLHDC4Q8TBB5 520 aa28.14■■■□□ 2.1
RARA-204ENST00000394089 SIL1Q9H173 461 aa28.14■■■□□ 2.09
RARA-204ENST00000394089 NHSQ6T4R5 1651 aa28.14■■■□□ 2.09
RARA-204ENST00000394089 COL5A3P25940 1745 aaPredicted RBP28.13■■■□□ 2.09
RARA-204ENST00000394089 NLRP10Q86W26 655 aa28.13■■■□□ 2.09
RARA-204ENST00000394089 PLA2G12BQ9BX93 195 aa28.13■■■□□ 2.09
RARA-204ENST00000394089 IFIT2P09913 472 aaKnown RBP28.13■■■□□ 2.09
RARA-204ENST00000394089 TBC1D2BQ9UPU7 963 aa28.12■■■□□ 2.09
RARA-204ENST00000394089 CDHR2Q9BYE9 1310 aa28.12■■■□□ 2.09
RARA-204ENST00000394089 PTMSP20962 102 aa28.11■■■□□ 2.09
RARA-204ENST00000394089 AACSQ86V21 672 aa28.11■■■□□ 2.09
RARA-204ENST00000394089 GPATCH3Q96I76 525 aa28.11■■■□□ 2.09
RARA-204ENST00000394089 GZF1Q9H116 711 aaPredicted RBP28.11■■■□□ 2.09
RARA-204ENST00000394089 NUP98P52948 1817 aa28.1■■■□□ 2.09
RARA-204ENST00000394089 TRIM6-TRIM34B2RNG4 842 aa28.1■■■□□ 2.09
RARA-204ENST00000394089 ERC2O15083 957 aa28.1■■■□□ 2.09
RARA-204ENST00000394089 GLRX3O76003 335 aaKnown RBP28.1■■■□□ 2.09
RARA-204ENST00000394089 TERF1P54274 439 aa28.1■■■□□ 2.09
RARA-204ENST00000394089 ECHDC1Q9NTX5 307 aa28.1■■■□□ 2.09
RARA-204ENST00000394089 CIZ1Q9ULV3 898 aaPredicted RBP28.1■■■□□ 2.09
RARA-204ENST00000394089 ZNF34Q8IZ26 560 aa28.09■■■□□ 2.09
RARA-204ENST00000394089 EAF2Q96CJ1 260 aaPredicted RBP28.09■■■□□ 2.09
RARA-204ENST00000394089 CHMP3Q9Y3E7 222 aa28.09■■■□□ 2.09
RARA-204ENST00000394089 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.09■■■□□ 2.09
RARA-204ENST00000394089 GPTP24298 496 aa28.08■■■□□ 2.09
RARA-204ENST00000394089 RILPL2Q969X0 211 aa28.08■■■□□ 2.09
RARA-204ENST00000394089 FAM89AQ96GI7 184 aa28.08■■■□□ 2.08
RARA-204ENST00000394089 MYH14Q7Z406 1995 aaKnown RBP28.07■■■□□ 2.08
RARA-204ENST00000394089 BTAF1O14981 1849 aa28.07■■■□□ 2.08
RARA-204ENST00000394089 SEPT12Q8IYM1 358 aa28.07■■■□□ 2.08
RARA-204ENST00000394089 SKOR2Q2VWA4 1001 aaPredicted RBP28.06■■■□□ 2.08
RARA-204ENST00000394089 PTF1AQ7RTS3 328 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms