RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 ANKRD20A12PQ8NF67 263 aa12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 KLHDC4Q8TBB5 520 aa12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 SPATA32Q96LK8 384 aa12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 IGSF1Q8N6C5 1336 aa12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 FAM98CQ17RN3 349 aaKnown RBP12.54□□□□□ -0.4
MTHFD2-201ENST00000394053 PNMA6EA0A0J9YXQ4 647 aa12.54□□□□□ -0.4
MTHFD2-201ENST00000394053 RANBP6O60518 1105 aaKnown RBP12.54□□□□□ -0.4
MTHFD2-201ENST00000394053 POLR3DP05423 398 aaPredicted RBP12.54□□□□□ -0.4
MTHFD2-201ENST00000394053 MKNK2Q9HBH9 465 aa12.54□□□□□ -0.4
MTHFD2-201ENST00000394053 CFAP45Q9UL16 551 aa12.54□□□□□ -0.4
MTHFD2-201ENST00000394053 TFCP2Q12800 502 aa12.54□□□□□ -0.4
MTHFD2-201ENST00000394053 TCEANC2Q96MN5 208 aa12.54□□□□□ -0.4
MTHFD2-201ENST00000394053 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
MTHFD2-201ENST00000394053 SSFA2P28290 1259 aa12.54□□□□□ -0.4
MTHFD2-201ENST00000394053 LETM1O95202 739 aaPredicted RBP12.53□□□□□ -0.4
MTHFD2-201ENST00000394053 TPM2P07951 284 aa12.53□□□□□ -0.4
MTHFD2-201ENST00000394053 UQCRFS1P1P0C7P4 283 aa12.53□□□□□ -0.4
MTHFD2-201ENST00000394053 CCT2P78371 535 aaKnown RBP12.53□□□□□ -0.4
MTHFD2-201ENST00000394053 NAT10Q9H0A0 1025 aaKnown RBP12.53□□□□□ -0.4
MTHFD2-201ENST00000394053 SPHKAPQ2M3C7 1700 aa12.53□□□□□ -0.4
MTHFD2-201ENST00000394053 PDIA4P13667 645 aaKnown RBP12.53□□□□□ -0.4
MTHFD2-201ENST00000394053 NEK1Q96PY6 1258 aa12.53□□□□□ -0.4
MTHFD2-201ENST00000394053 TIMM10P62072 90 aa12.53□□□□□ -0.4
MTHFD2-201ENST00000394053 TPTE2Q6XPS3 522 aa12.53□□□□□ -0.4
MTHFD2-201ENST00000394053 PCMTD1Q96MG8 357 aaPredicted RBP12.53□□□□□ -0.4
MTHFD2-201ENST00000394053 TRPM1Q7Z4N2 1603 aa12.53□□□□□ -0.4
MTHFD2-201ENST00000394053 TTC41PQ6P2S7 1318 aa12.53□□□□□ -0.4
MTHFD2-201ENST00000394053 KDM2BQ8NHM5 1336 aa12.53□□□□□ -0.4
MTHFD2-201ENST00000394053 IFIT3O14879 490 aaKnown RBP12.52□□□□□ -0.4
MTHFD2-201ENST00000394053 OLFM4Q6UX06 510 aa12.52□□□□□ -0.4
MTHFD2-201ENST00000394053 DNAJC5Q9H3Z4 198 aa12.52□□□□□ -0.4
MTHFD2-201ENST00000394053 TSPY26PQ9H489 355 aa12.52□□□□□ -0.4
MTHFD2-201ENST00000394053 RBM8AQ9Y5S9 174 aaKnown RBP12.52□□□□□ -0.4
MTHFD2-201ENST00000394053 ZNF335Q9H4Z2 1342 aaPredicted RBP12.52□□□□□ -0.41
MTHFD2-201ENST00000394053 GUCY1B3Q02153 619 aa12.52□□□□□ -0.41
MTHFD2-201ENST00000394053 IQCA1Q86XH1 822 aa12.52□□□□□ -0.41
MTHFD2-201ENST00000394053 PPFIA3O75145 1194 aa12.52□□□□□ -0.41
MTHFD2-201ENST00000394053 GCKRQ14397 625 aa12.52□□□□□ -0.41
MTHFD2-201ENST00000394053 SLC9C2Q5TAH2 1124 aa12.52□□□□□ -0.41
MTHFD2-201ENST00000394053 CCDC43Q96MW1 224 aaKnown RBP12.52□□□□□ -0.41
MTHFD2-201ENST00000394053 TNMDQ9H2S6 317 aa12.52□□□□□ -0.41
MTHFD2-201ENST00000394053 CCDC191Q8NCU4 936 aa12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 TNPO1Q92973 898 aaKnown RBP12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 TRIM5Q9C035 493 aa12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 USP44Q9H0E7 712 aa12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 BCORL1Q5H9F3 1711 aa12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 ZFYP08048 801 aaPredicted RBP12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 SOGA3Q5TF21 947 aa12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 E9PCH4 1651 aa12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 ERVV-2B6SEH9 535 aa12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 GNPATO15228 680 aa12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 MCMDC2Q4G0Z9 681 aa12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 ZNF622Q969S3 477 aaKnown RBP eCLIP12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 RNF41Q9H4P4 317 aaPredicted RBP12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 ZNF287Q9HBT7 754 aa12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 PAG1Q9NWQ8 432 aa12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 HMG20BQ9P0W2 317 aa12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 TMX3Q96JJ7 454 aa12.51□□□□□ -0.41
MTHFD2-201ENST00000394053 GOLGA8BA8MQT2 603 aa12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 HCLS1P14317 486 aaPredicted RBP12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 TXLNAP40222 546 aa12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 SUCLG2Q96I99 432 aa12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 ARID3AQ99856 593 aa12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 TMOD2Q9NZR1 351 aa12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 SLC12A7Q9Y666 1083 aa12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 CHMLP26374 656 aa12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 NMIQ13287 307 aaPredicted RBP12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 BRF1Q92994 677 aa12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 ABCC4O15439 1325 aa12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 CCDC196A0A1B0GTZ2 297 aa12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 ERBB3P21860 1342 aa12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 ZNF444Q8N0Y2 327 aaPredicted RBP12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 SH3TC1Q8TE82 1336 aa12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 WASF1Q92558 559 aa12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 C8orf76Q96K31 380 aa12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 LRRC2Q9BYS8 371 aa12.5□□□□□ -0.41
MTHFD2-201ENST00000394053 ALKQ9UM73 1620 aa12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 CCDC192P0DO97 292 aa12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 ST5P78524 1137 aa12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 EYA2O00167 538 aa12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 HMGN5P82970 282 aaKnown RBP12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 RAB11FIP4Q86YS3 637 aa12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 CTCFLQ8NI51 663 aaPredicted RBP12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 ZNF592Q92610 1267 aa12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 TFCP2L1Q9NZI6 479 aa12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 MPHOSPH10O00566 681 aaKnown RBP12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 LDHCP07864 332 aa12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 ANAPC15P60006 121 aa12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 CRACR2BQ8N4Y2 399 aaPredicted RBP12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 NECAB1Q8N987 351 aa12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 ZNF594Q96JF6 807 aaPredicted RBP12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 GDPD2Q9HCC8 539 aa12.49□□□□□ -0.41
MTHFD2-201ENST00000394053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.49□□□□□ -0.412e-7■■□□□ 12.4
MTHFD2-201ENST00000394053 CYP7A1P22680 504 aa12.48□□□□□ -0.41
MTHFD2-201ENST00000394053 NCOA7Q8NI08 942 aa12.48□□□□□ -0.41
MTHFD2-201ENST00000394053 CCNL1Q9UK58 526 aaPredicted RBP12.48□□□□□ -0.41
MTHFD2-201ENST00000394053 NOL7Q9UMY1 257 aaKnown RBP12.48□□□□□ -0.41
MTHFD2-201ENST00000394053 CEP152O94986 1710 aa12.48□□□□□ -0.41
MTHFD2-201ENST00000394053 GJB2P29033 226 aa12.48□□□□□ -0.41
MTHFD2-201ENST00000394053 MICU3Q86XE3 530 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms