RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 STRN4Q9NRL3 753 aa16.55■□□□□ 0.24
CCDC142-202ENST00000393965 ECHDC1Q9NTX5 307 aa16.55■□□□□ 0.24
CCDC142-202ENST00000393965 ANKRD13DQ6ZTN6 518 aa16.55■□□□□ 0.24
CCDC142-202ENST00000393965 TTC5Q8N0Z6 440 aa16.55■□□□□ 0.24
CCDC142-202ENST00000393965 NBPF26B4DH59 902 aa16.55■□□□□ 0.24
CCDC142-202ENST00000393965 MCCP23508 829 aa16.55■□□□□ 0.24
CCDC142-202ENST00000393965 CABP4P57796 275 aa16.55■□□□□ 0.24
CCDC142-202ENST00000393965 NUCB2P80303 420 aa16.55■□□□□ 0.24
CCDC142-202ENST00000393965 NBPF14Q5TI25 921 aa16.55■□□□□ 0.24
CCDC142-202ENST00000393965 NBPF10Q6P3W6 841 aaKnown RBP16.55■□□□□ 0.24
CCDC142-202ENST00000393965 C17orf53Q8N3J3 647 aaPredicted RBP16.55■□□□□ 0.24
CCDC142-202ENST00000393965 NBPF15Q8N660 670 aa16.55■□□□□ 0.24
CCDC142-202ENST00000393965 PKNOX2Q96KN3 472 aa16.55■□□□□ 0.24
CCDC142-202ENST00000393965 ZMYND15Q9H091 742 aa16.55■□□□□ 0.24
CCDC142-202ENST00000393965 METTL22Q9BUU2 404 aaPredicted RBP16.54■□□□□ 0.24
CCDC142-202ENST00000393965 UTYO14607 1347 aa16.54■□□□□ 0.24
CCDC142-202ENST00000393965 DDX58O95786 925 aaKnown RBP16.54■□□□□ 0.24
CCDC142-202ENST00000393965 AK2P54819 239 aa16.54■□□□□ 0.24
CCDC142-202ENST00000393965 ARFGEF2Q9Y6D5 1785 aa16.54■□□□□ 0.24
CCDC142-202ENST00000393965 SLFNL1Q499Z3 407 aa16.54■□□□□ 0.24
CCDC142-202ENST00000393965 PRPF40BQ6NWY9 871 aaKnown RBP16.54■□□□□ 0.24
CCDC142-202ENST00000393965 TTLL7Q6ZT98 887 aa16.54■□□□□ 0.24
CCDC142-202ENST00000393965 DCAF5Q96JK2 942 aa16.54■□□□□ 0.24
CCDC142-202ENST00000393965 USP42Q9H9J4 1324 aaKnown RBP16.54■□□□□ 0.24
CCDC142-202ENST00000393965 GLRX3O76003 335 aaKnown RBP16.53■□□□□ 0.24
CCDC142-202ENST00000393965 CUL4AQ13619 759 aa16.53■□□□□ 0.24
CCDC142-202ENST00000393965 TCEANC2Q96MN5 208 aa16.53■□□□□ 0.24
CCDC142-202ENST00000393965 PRDM11Q9NQV5 511 aa16.53■□□□□ 0.24
CCDC142-202ENST00000393965 A1BGP04217 495 aa16.53■□□□□ 0.24
CCDC142-202ENST00000393965 SNRPA1P09661 255 aaKnown RBP16.53■□□□□ 0.24
CCDC142-202ENST00000393965 G3BP1Q13283 466 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC142-202ENST00000393965 LARP1Q6PKG0 1096 aaKnown RBP16.53■□□□□ 0.24
CCDC142-202ENST00000393965 TOM1L2Q6ZVM7 507 aa16.53■□□□□ 0.24
CCDC142-202ENST00000393965 RUFY3Q7L099 469 aa16.53■□□□□ 0.24
CCDC142-202ENST00000393965 PKD1L3Q7Z443 1732 aa16.53■□□□□ 0.24
CCDC142-202ENST00000393965 A0A0D9SFI3 127 aa16.52■□□□□ 0.24
CCDC142-202ENST00000393965 PRDM10Q9NQV6 1147 aa16.52■□□□□ 0.24
CCDC142-202ENST00000393965 DIAPH3Q9NSV4 1193 aa16.52■□□□□ 0.24
CCDC142-202ENST00000393965 NMIQ13287 307 aaPredicted RBP16.52■□□□□ 0.24
CCDC142-202ENST00000393965 CWC22Q9HCG8 908 aaKnown RBP16.52■□□□□ 0.24
CCDC142-202ENST00000393965 TTC41PQ6P2S7 1318 aa16.52■□□□□ 0.24
CCDC142-202ENST00000393965 CASTP20810 708 aaKnown RBP16.52■□□□□ 0.23
CCDC142-202ENST00000393965 ANAPC15P60006 121 aa16.52■□□□□ 0.23
CCDC142-202ENST00000393965 HSP90AB4PQ58FF6 505 aa16.52■□□□□ 0.23
CCDC142-202ENST00000393965 TTC14Q96N46 770 aa16.52■□□□□ 0.23
CCDC142-202ENST00000393965 KLHL40Q2TBA0 621 aa16.51■□□□□ 0.23
CCDC142-202ENST00000393965 SLAIN2Q9P270 581 aa16.51■□□□□ 0.23
CCDC142-202ENST00000393965 TFCP2Q12800 502 aa16.51■□□□□ 0.23
CCDC142-202ENST00000393965 FMNL2Q96PY5 1086 aa16.51■□□□□ 0.23
CCDC142-202ENST00000393965 TMEM63CQ9P1W3 806 aa16.51■□□□□ 0.23
CCDC142-202ENST00000393965 FIBPO43427 364 aa16.51■□□□□ 0.23
CCDC142-202ENST00000393965 PPFIA3O75145 1194 aa16.51■□□□□ 0.23
CCDC142-202ENST00000393965 RFX5P48382 616 aaPredicted RBP16.51■□□□□ 0.23
CCDC142-202ENST00000393965 ZNF589Q86UQ0 364 aaPredicted RBP16.51■□□□□ 0.23
CCDC142-202ENST00000393965 PTPN12Q05209 780 aaKnown RBP16.5■□□□□ 0.23
CCDC142-202ENST00000393965 NEXNQ0ZGT2 675 aa16.5■□□□□ 0.23
CCDC142-202ENST00000393965 A0A087WZG4 1122 aa16.5■□□□□ 0.23
CCDC142-202ENST00000393965 BRD1O95696 1058 aa16.5■□□□□ 0.23
CCDC142-202ENST00000393965 KAT6BQ8WYB5 2073 aa16.5■□□□□ 0.23
CCDC142-202ENST00000393965 RPAP1Q9BWH6 1393 aaPredicted RBP16.5■□□□□ 0.23
CCDC142-202ENST00000393965 FOSBP53539 338 aa16.5■□□□□ 0.23
CCDC142-202ENST00000393965 CCDC173Q0VFZ6 552 aa16.5■□□□□ 0.23
CCDC142-202ENST00000393965 ZSCAN30Q86W11 494 aa16.5■□□□□ 0.23
CCDC142-202ENST00000393965 ZBTB3Q9H5J0 574 aa16.5■□□□□ 0.23
CCDC142-202ENST00000393965 MRC1P22897 1456 aa16.49■□□□□ 0.23
CCDC142-202ENST00000393965 DBNLQ9UJU6 430 aaKnown RBP16.49■□□□□ 0.23
CCDC142-202ENST00000393965 GADD45BO75293 160 aaPredicted RBP16.49■□□□□ 0.23
CCDC142-202ENST00000393965 ST3GAL1Q11201 340 aa16.49■□□□□ 0.23
CCDC142-202ENST00000393965 JAKMIP1Q96N16 626 aaKnown RBP16.49■□□□□ 0.23
CCDC142-202ENST00000393965 COL15A1P39059 1388 aa16.49■□□□□ 0.23
CCDC142-202ENST00000393965 ZNF330Q9Y3S2 320 aaPredicted RBP16.48■□□□□ 0.23
CCDC142-202ENST00000393965 LMTK3Q96Q04 1460 aa16.48■□□□□ 0.23
CCDC142-202ENST00000393965 DCCP43146 1447 aa16.48■□□□□ 0.23
CCDC142-202ENST00000393965 SEC62Q99442 399 aaKnown RBP16.48■□□□□ 0.23
CCDC142-202ENST00000393965 CHMP4AQ9BY43 222 aa16.48■□□□□ 0.23
CCDC142-202ENST00000393965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.48■□□□□ 0.23
CCDC142-202ENST00000393965 CCDC129Q6ZRS4 1044 aa16.48■□□□□ 0.23
CCDC142-202ENST00000393965 IL17RAQ96F46 866 aa16.48■□□□□ 0.23
CCDC142-202ENST00000393965 ZNF594Q96JF6 807 aaPredicted RBP16.48■□□□□ 0.23
CCDC142-202ENST00000393965 KCNJ4P48050 445 aa16.47■□□□□ 0.23
CCDC142-202ENST00000393965 STRCQ7RTU9 1775 aa16.47■□□□□ 0.23
CCDC142-202ENST00000393965 CASP7P55210 303 aa16.47■□□□□ 0.23
CCDC142-202ENST00000393965 NECAB1Q8N987 351 aa16.47■□□□□ 0.23
CCDC142-202ENST00000393965 ZCRB1Q8TBF4 217 aaKnown RBP16.47■□□□□ 0.23
CCDC142-202ENST00000393965 DBNDD2Q9BQY9 259 aa16.47■□□□□ 0.23
CCDC142-202ENST00000393965 RBM8AQ9Y5S9 174 aaKnown RBP16.47■□□□□ 0.23
CCDC142-202ENST00000393965 A0A0G2JS52 829 aa16.47■□□□□ 0.23
CCDC142-202ENST00000393965 LMBR1LQ6UX01 489 aa16.47■□□□□ 0.23
CCDC142-202ENST00000393965 ERC1Q8IUD2 1116 aa16.47■□□□□ 0.23
CCDC142-202ENST00000393965 SPC24Q8NBT2 197 aa16.47■□□□□ 0.23
CCDC142-202ENST00000393965 EVI5LQ96CN4 794 aa16.47■□□□□ 0.23
CCDC142-202ENST00000393965 FSD1Q9BTV5 496 aa16.47■□□□□ 0.23
CCDC142-202ENST00000393965 WDR17Q8IZU2 1322 aa16.46■□□□□ 0.23
CCDC142-202ENST00000393965 SHANK3Q9BYB0 1731 aa16.46■□□□□ 0.23
CCDC142-202ENST00000393965 CCDC83Q8IWF9 413 aa16.46■□□□□ 0.23
CCDC142-202ENST00000393965 CCDC85AQ96PX6 553 aaPredicted RBP16.46■□□□□ 0.23
CCDC142-202ENST00000393965 FERMT3Q86UX7 667 aa16.46■□□□□ 0.23
CCDC142-202ENST00000393965 CCDC171Q6TFL3 1326 aa16.46■□□□□ 0.22
CCDC142-202ENST00000393965 COL5A2P05997 1499 aaPredicted RBP16.46■□□□□ 0.22
CCDC142-202ENST00000393965 CPDO75976 1380 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms