RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 IL6STP40189 918 aaPredicted RBP27.15■■□□□ 1.94
HMGA2-203ENST00000393578 LMBR1LQ6UX01 489 aa27.15■■□□□ 1.94
HMGA2-203ENST00000393578 GIGYF2Q6Y7W6 1299 aaKnown RBP27.15■■□□□ 1.94
HMGA2-203ENST00000393578 USP26Q9BXU7 913 aa27.15■■□□□ 1.94
HMGA2-203ENST00000393578 USP21Q9UK80 565 aa27.15■■□□□ 1.94
HMGA2-203ENST00000393578 GLRX3O76003 335 aaKnown RBP27.14■■□□□ 1.94
HMGA2-203ENST00000393578 AACSQ86V21 672 aa27.13■■□□□ 1.93
HMGA2-203ENST00000393578 ECHDC1Q9NTX5 307 aa27.13■■□□□ 1.93
HMGA2-203ENST00000393578 KIF2CQ99661 725 aa27.13■■□□□ 1.93
HMGA2-203ENST00000393578 CHMLP26374 656 aa27.12■■□□□ 1.93
HMGA2-203ENST00000393578 HSP90AB3PQ58FF7 597 aa27.12■■□□□ 1.93
HMGA2-203ENST00000393578 SMARCC1Q92922 1105 aaPredicted RBP27.12■■□□□ 1.93
HMGA2-203ENST00000393578 ARXQ96QS3 562 aa27.12■■□□□ 1.93
HMGA2-203ENST00000393578 CICQ96RK0 1608 aaPredicted RBP27.12■■□□□ 1.93
HMGA2-203ENST00000393578 LOC102724428A0A0B4J2F2 783 aa27.11■■□□□ 1.93
HMGA2-203ENST00000393578 SIK1P57059 783 aa27.11■■□□□ 1.93
HMGA2-203ENST00000393578 ATP6V1AP38606 617 aa27.11■■□□□ 1.93
HMGA2-203ENST00000393578 RTL5Q5HYW3 569 aaPredicted RBP27.11■■□□□ 1.93
HMGA2-203ENST00000393578 EAF2Q96CJ1 260 aaPredicted RBP27.11■■□□□ 1.93
HMGA2-203ENST00000393578 ERVV-1B6SEH8 477 aa27.1■■□□□ 1.93
HMGA2-203ENST00000393578 ESYT1Q9BSJ8 1104 aa27.1■■□□□ 1.93
HMGA2-203ENST00000393578 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.1■■□□□ 1.93
HMGA2-203ENST00000393578 PALLDQ8WX93 1383 aa27.1■■□□□ 1.93
HMGA2-203ENST00000393578 PCCAP05165 728 aaPredicted RBP27.09■■□□□ 1.93
HMGA2-203ENST00000393578 HSPA1LP34931 641 aa27.09■■□□□ 1.93
HMGA2-203ENST00000393578 CNTROBQ8N137 903 aa27.09■■□□□ 1.93
HMGA2-203ENST00000393578 CCDC87Q9NVE4 849 aa27.09■■□□□ 1.93
HMGA2-203ENST00000393578 KCNQ2O43526 872 aa27.08■■□□□ 1.93
HMGA2-203ENST00000393578 HLFQ16534 295 aa27.08■■□□□ 1.93
HMGA2-203ENST00000393578 ZBTB38Q8NAP3 1195 aaPredicted RBP27.08■■□□□ 1.93
HMGA2-203ENST00000393578 SNX21Q969T3 373 aa27.08■■□□□ 1.93
HMGA2-203ENST00000393578 INTS5Q6P9B9 1019 aaKnown RBP27.08■■□□□ 1.92
HMGA2-203ENST00000393578 CHMP3Q9Y3E7 222 aa27.08■■□□□ 1.92
HMGA2-203ENST00000393578 AK9Q5TCS8 1911 aa27.07■■□□□ 1.92
HMGA2-203ENST00000393578 EIF5P55010 431 aaKnown RBP27.07■■□□□ 1.92
HMGA2-203ENST00000393578 DZIP3Q86Y13 1208 aaKnown RBP27.07■■□□□ 1.92
HMGA2-203ENST00000393578 THSD7AQ9UPZ6 1657 aa27.06■■□□□ 1.92
HMGA2-203ENST00000393578 CRKLP46109 303 aaKnown RBP27.06■■□□□ 1.92
HMGA2-203ENST00000393578 HSCBQ8IWL3 235 aa27.06■■□□□ 1.92
HMGA2-203ENST00000393578 PLA2G12BQ9BX93 195 aa27.06■■□□□ 1.92
HMGA2-203ENST00000393578 ANKRD36CQ5JPF3 1778 aa27.05■■□□□ 1.92
HMGA2-203ENST00000393578 RREB1Q92766 1687 aa27.05■■□□□ 1.92
HMGA2-203ENST00000393578 MAP4K4O95819 1239 aaPredicted RBP27.05■■□□□ 1.92
HMGA2-203ENST00000393578 ITPK1Q13572 414 aa27.05■■□□□ 1.92
HMGA2-203ENST00000393578 MEX3CQ5U5Q3 659 aaKnown RBP27.05■■□□□ 1.92
HMGA2-203ENST00000393578 NLRP10Q86W26 655 aa27.05■■□□□ 1.92
HMGA2-203ENST00000393578 CCDC8Q9H0W5 538 aaPredicted RBP27.05■■□□□ 1.92
HMGA2-203ENST00000393578 MYT1Q01538 1121 aa27.04■■□□□ 1.92
HMGA2-203ENST00000393578 ZNF831Q5JPB2 1677 aa27.04■■□□□ 1.92
HMGA2-203ENST00000393578 TFCP2Q12800 502 aa27.04■■□□□ 1.92
HMGA2-203ENST00000393578 FAM89AQ96GI7 184 aa27.03■■□□□ 1.92
HMGA2-203ENST00000393578 TBC1D2BQ9UPU7 963 aa27.03■■□□□ 1.92
HMGA2-203ENST00000393578 CDHR2Q9BYE9 1310 aa27.03■■□□□ 1.92
HMGA2-203ENST00000393578 NUP98P52948 1817 aa27.02■■□□□ 1.92
HMGA2-203ENST00000393578 TNNI3KQ59H18 835 aa27.02■■□□□ 1.92
HMGA2-203ENST00000393578 FPGT-TNNI3KV9GXZ4 949 aa27.02■■□□□ 1.92
HMGA2-203ENST00000393578 GPTP24298 496 aa27.02■■□□□ 1.92
HMGA2-203ENST00000393578 TLR7Q9NYK1 1049 aaKnown RBP27.02■■□□□ 1.92
HMGA2-203ENST00000393578 RABEP1Q15276 862 aa27.01■■□□□ 1.91
HMGA2-203ENST00000393578 EPB41L2O43491 1005 aaKnown RBP27■■□□□ 1.91
HMGA2-203ENST00000393578 ATG9AQ7Z3C6 839 aa27■■□□□ 1.91
HMGA2-203ENST00000393578 EVI5LQ96CN4 794 aa27■■□□□ 1.91
HMGA2-203ENST00000393578 IL15P40933 162 aaPredicted RBP27■■□□□ 1.91
HMGA2-203ENST00000393578 GJD4Q96KN9 370 aaPredicted RBP27■■□□□ 1.91
HMGA2-203ENST00000393578 CIAO1O76071 339 aa26.99■■□□□ 1.91
HMGA2-203ENST00000393578 CSF1RP07333 972 aa26.99■■□□□ 1.91
HMGA2-203ENST00000393578 ZNF34Q8IZ26 560 aa26.99■■□□□ 1.91
HMGA2-203ENST00000393578 CCDC57Q2TAC2 916 aa26.98■■□□□ 1.91
HMGA2-203ENST00000393578 AFF2P51816 1311 aa26.98■■□□□ 1.91
HMGA2-203ENST00000393578 EYA2O00167 538 aa26.98■■□□□ 1.91
HMGA2-203ENST00000393578 GPR108Q9NPR9 543 aa26.98■■□□□ 1.91
HMGA2-203ENST00000393578 ANO2Q9NQ90 1003 aa26.98■■□□□ 1.91
HMGA2-203ENST00000393578 DBNLQ9UJU6 430 aaKnown RBP26.98■■□□□ 1.91
HMGA2-203ENST00000393578 FBXO3Q9UK99 471 aa26.98■■□□□ 1.91
HMGA2-203ENST00000393578 COL5A3P25940 1745 aaPredicted RBP26.97■■□□□ 1.91
HMGA2-203ENST00000393578 MYH14Q7Z406 1995 aaKnown RBP26.97■■□□□ 1.91
HMGA2-203ENST00000393578 TRMT112Q9UI30 125 aaKnown RBP26.97■■□□□ 1.91
HMGA2-203ENST00000393578 SGSM2O43147 1006 aa26.96■■□□□ 1.91
HMGA2-203ENST00000393578 ANTXR1Q9H6X2 564 aa26.96■■□□□ 1.91
HMGA2-203ENST00000393578 ATP5JP18859 108 aa26.95■■□□□ 1.91
HMGA2-203ENST00000393578 MCCP23508 829 aa26.95■■□□□ 1.91
HMGA2-203ENST00000393578 UBN2Q6ZU65 1347 aa26.95■■□□□ 1.9
HMGA2-203ENST00000393578 NBR1Q14596 966 aa26.95■■□□□ 1.9
HMGA2-203ENST00000393578 ZNF594Q96JF6 807 aaPredicted RBP26.95■■□□□ 1.9
HMGA2-203ENST00000393578 SLKQ9H2G2 1235 aaPredicted RBP26.95■■□□□ 1.9
HMGA2-203ENST00000393578 CAMTA2O94983 1202 aa26.94■■□□□ 1.9
HMGA2-203ENST00000393578 SYNE4Q8N205 404 aa26.94■■□□□ 1.9
HMGA2-203ENST00000393578 RUFY2Q8WXA3 655 aa26.94■■□□□ 1.9
HMGA2-203ENST00000393578 DIAPH3Q9NSV4 1193 aa26.94■■□□□ 1.9
HMGA2-203ENST00000393578 ONECUT3O60422 494 aaPredicted RBP26.93■■□□□ 1.9
HMGA2-203ENST00000393578 IFIT5Q13325 482 aaKnown RBP26.93■■□□□ 1.9
HMGA2-203ENST00000393578 LRRC24Q50LG9 513 aa26.93■■□□□ 1.9
HMGA2-203ENST00000393578 IL25Q9H293 177 aa26.93■■□□□ 1.9
HMGA2-203ENST00000393578 BOLA2Q9H3K6 86 aa26.93■■□□□ 1.9
HMGA2-203ENST00000393578 ATRNO75882 1429 aa26.93■■□□□ 1.9
HMGA2-203ENST00000393578 HIP1O00291 1037 aa26.93■■□□□ 1.9
HMGA2-203ENST00000393578 IRS4O14654 1257 aaPredicted RBP26.93■■□□□ 1.9
HMGA2-203ENST00000393578 NHSQ6T4R5 1651 aa26.92■■□□□ 1.9
HMGA2-203ENST00000393578 ANAPC15P60006 121 aa26.92■■□□□ 1.9
HMGA2-203ENST00000393578 TTLL11Q8NHH1 800 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms