RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 CEP135Q66GS9 1140 aa19.26■□□□□ 0.67
TRA2A-202ENST00000392502 INTS3Q68E01 1043 aaKnown RBP19.26■□□□□ 0.67
TRA2A-202ENST00000392502 ANKLE2Q86XL3 938 aa19.26■□□□□ 0.67
TRA2A-202ENST00000392502 TMEM87AQ8NBN3 555 aa19.26■□□□□ 0.67
TRA2A-202ENST00000392502 TACO1Q9BSH4 297 aaKnown RBP19.26■□□□□ 0.67
TRA2A-202ENST00000392502 CCDC196A0A1B0GTZ2 297 aa19.25■□□□□ 0.67
TRA2A-202ENST00000392502 MCM2P49736 904 aa19.25■□□□□ 0.67
TRA2A-202ENST00000392502 RRP15Q9Y3B9 282 aaKnown RBP19.25■□□□□ 0.67
TRA2A-202ENST00000392502 LMTK3Q96Q04 1460 aa19.25■□□□□ 0.67
TRA2A-202ENST00000392502 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.25■□□□□ 0.67
TRA2A-202ENST00000392502 NFATC2IPQ8NCF5 419 aa19.25■□□□□ 0.67
TRA2A-202ENST00000392502 ATP6V1AP38606 617 aa19.24■□□□□ 0.67
TRA2A-202ENST00000392502 MAP2K1Q02750 393 aaPredicted RBP19.24■□□□□ 0.67
TRA2A-202ENST00000392502 G2E3Q7L622 706 aa19.24■□□□□ 0.67
TRA2A-202ENST00000392502 PPM1EQ8WY54 764 aa19.24■□□□□ 0.67
TRA2A-202ENST00000392502 LTV1Q96GA3 475 aaPredicted RBP19.24■□□□□ 0.67
TRA2A-202ENST00000392502 TSPYL4Q9UJ04 414 aa19.24■□□□□ 0.67
TRA2A-202ENST00000392502 MSH6P52701 1360 aa19.24■□□□□ 0.67
TRA2A-202ENST00000392502 ELP1O95163 1332 aa19.24■□□□□ 0.67
TRA2A-202ENST00000392502 SLU7O95391 586 aaKnown RBP19.24■□□□□ 0.67
TRA2A-202ENST00000392502 SLC4A2P04920 1241 aa19.24■□□□□ 0.67
TRA2A-202ENST00000392502 HOXC9P31274 260 aa19.24■□□□□ 0.67
TRA2A-202ENST00000392502 RTF1Q92541 710 aaKnown RBP19.24■□□□□ 0.67
TRA2A-202ENST00000392502 C16orf45Q96MC5 204 aaPredicted RBP19.24■□□□□ 0.67
TRA2A-202ENST00000392502 TMX1Q9H3N1 280 aa19.24■□□□□ 0.67
TRA2A-202ENST00000392502 ARGLU1Q9NWB6 273 aaPredicted RBP19.24■□□□□ 0.67
TRA2A-202ENST00000392502 FHOD1Q9Y613 1164 aa19.24■□□□□ 0.67
TRA2A-202ENST00000392502 KIF3CO14782 793 aa19.23■□□□□ 0.67
TRA2A-202ENST00000392502 ABTB2Q8N961 1025 aa19.23■□□□□ 0.67
TRA2A-202ENST00000392502 TULP1O00294 542 aaPredicted RBP19.23■□□□□ 0.67
TRA2A-202ENST00000392502 TRIM66O15016 1216 aa19.23■□□□□ 0.67
TRA2A-202ENST00000392502 MCTP2Q6DN12 878 aa19.23■□□□□ 0.67
TRA2A-202ENST00000392502 MPNDQ8N594 471 aa19.23■□□□□ 0.67
TRA2A-202ENST00000392502 SUFUQ9UMX1 484 aa19.23■□□□□ 0.67
TRA2A-202ENST00000392502 ATP10DQ9P241 1426 aa19.22■□□□□ 0.67
TRA2A-202ENST00000392502 GOLIM4O00461 696 aa19.22■□□□□ 0.67
TRA2A-202ENST00000392502 NEMFO60524 1076 aa19.22■□□□□ 0.67
TRA2A-202ENST00000392502 NWD1Q149M9 1564 aa19.21■□□□□ 0.67
TRA2A-202ENST00000392502 C14orf37Q86TY3 774 aa19.21■□□□□ 0.67
TRA2A-202ENST00000392502 MEIS3Q99687 375 aa19.21■□□□□ 0.67
TRA2A-202ENST00000392502 HCLS1P14317 486 aaPredicted RBP19.21■□□□□ 0.67
TRA2A-202ENST00000392502 TPD52L1Q16890 204 aaPredicted RBP19.21■□□□□ 0.67
TRA2A-202ENST00000392502 DRC1Q96MC2 740 aa19.21■□□□□ 0.67
TRA2A-202ENST00000392502 ZNF215Q9UL58 517 aaPredicted RBP19.21■□□□□ 0.67
TRA2A-202ENST00000392502 F6X3S4 739 aa19.2■□□□□ 0.66
TRA2A-202ENST00000392502 PPP1R12AO14974 1030 aaPredicted RBP19.2■□□□□ 0.66
TRA2A-202ENST00000392502 TUBB4AP04350 444 aa19.2■□□□□ 0.66
TRA2A-202ENST00000392502 PNMA6AP0CW24 399 aaPredicted RBP19.2■□□□□ 0.66
TRA2A-202ENST00000392502 GYS2P54840 703 aa19.2■□□□□ 0.66
TRA2A-202ENST00000392502 C16orf71Q8IYS4 520 aaPredicted RBP19.2■□□□□ 0.66
TRA2A-202ENST00000392502 USHBP1Q8N6Y0 703 aa19.2■□□□□ 0.66
TRA2A-202ENST00000392502 EXOC4Q96A65 974 aa19.2■□□□□ 0.66
TRA2A-202ENST00000392502 INTS4Q96HW7 963 aaKnown RBP19.2■□□□□ 0.66
TRA2A-202ENST00000392502 PLCD4Q9BRC7 762 aa19.2■□□□□ 0.66
TRA2A-202ENST00000392502 DCTPP1Q9H773 170 aa19.2■□□□□ 0.66
TRA2A-202ENST00000392502 ST7Q9NRC1 585 aa19.2■□□□□ 0.66
TRA2A-202ENST00000392502 BSDC1Q9NW68 430 aaPredicted RBP19.2■□□□□ 0.66
TRA2A-202ENST00000392502 NAA30Q147X3 362 aaPredicted RBP19.19■□□□□ 0.66
TRA2A-202ENST00000392502 CEP85Q6P2H3 762 aa19.19■□□□□ 0.66
TRA2A-202ENST00000392502 EP400NLQ6ZTU2 488 aa19.19■□□□□ 0.66
TRA2A-202ENST00000392502 ANKRD44Q8N8A2 993 aa19.19■□□□□ 0.66
TRA2A-202ENST00000392502 NEK11Q8NG66 645 aa19.19■□□□□ 0.66
TRA2A-202ENST00000392502 UBXN6Q9BZV1 441 aa19.19■□□□□ 0.66
TRA2A-202ENST00000392502 TOMM22Q9NS69 142 aa19.19■□□□□ 0.66
TRA2A-202ENST00000392502 CPP00450 1065 aa19.19■□□□□ 0.66
TRA2A-202ENST00000392502 PLA2G4AP47712 749 aa19.19■□□□□ 0.66
TRA2A-202ENST00000392502 HSPA2P54652 639 aa19.19■□□□□ 0.66
TRA2A-202ENST00000392502 RTL1A6NKG5 1358 aa19.18■□□□□ 0.66
TRA2A-202ENST00000392502 NPHP4O75161 1426 aaPredicted RBP19.18■□□□□ 0.66
TRA2A-202ENST00000392502 GSPT1P15170 499 aaKnown RBP19.18■□□□□ 0.66
TRA2A-202ENST00000392502 ANKRD20A12PQ8NF67 263 aa19.18■□□□□ 0.66
TRA2A-202ENST00000392502 OTUD7AQ8TE49 926 aaPredicted RBP19.18■□□□□ 0.66
TRA2A-202ENST00000392502 FUCA2Q9BTY2 467 aa19.18■□□□□ 0.66
TRA2A-202ENST00000392502 LRRC37A3O60309 1634 aa19.18■□□□□ 0.66
TRA2A-202ENST00000392502 ELF2Q15723 593 aa19.17■□□□□ 0.66
TRA2A-202ENST00000392502 FILIP1Q7Z7B0 1213 aa19.17■□□□□ 0.66
TRA2A-202ENST00000392502 ZGPATQ8N5A5 531 aaKnown RBP19.17■□□□□ 0.66
TRA2A-202ENST00000392502 KCND1Q9NSA2 647 aa19.17■□□□□ 0.66
TRA2A-202ENST00000392502 PHF8Q9UPP1 1060 aa19.17■□□□□ 0.66
TRA2A-202ENST00000392502 MAP2K2P36507 400 aa19.17■□□□□ 0.66
TRA2A-202ENST00000392502 SLC4A10Q6U841 1118 aa19.17■□□□□ 0.66
TRA2A-202ENST00000392502 MMS22LQ6ZRQ5 1243 aa19.17■□□□□ 0.66
TRA2A-202ENST00000392502 PLEKHM2Q8IWE5 1019 aa19.17■□□□□ 0.66
TRA2A-202ENST00000392502 NECTIN2Q92692 538 aa19.17■□□□□ 0.66
TRA2A-202ENST00000392502 PHRF1Q9P1Y6 1649 aaKnown RBP19.16■□□□□ 0.66
TRA2A-202ENST00000392502 APBB1O00213 710 aa19.16■□□□□ 0.66
TRA2A-202ENST00000392502 TPM1P09493 284 aa19.16■□□□□ 0.66
TRA2A-202ENST00000392502 SSR1P43307 286 aaKnown RBP19.16■□□□□ 0.66
TRA2A-202ENST00000392502 IL17REQ8NFR9 667 aa19.16■□□□□ 0.66
TRA2A-202ENST00000392502 USP26Q9BXU7 913 aa19.16■□□□□ 0.66
TRA2A-202ENST00000392502 SMARCA5O60264 1052 aaPredicted RBP19.16■□□□□ 0.66
TRA2A-202ENST00000392502 RPS6KA5O75582 802 aa19.16■□□□□ 0.66
TRA2A-202ENST00000392502 ZRANB2O95218 330 aaKnown RBP eCLIP19.16■□□□□ 0.665e-6■■■□□ 15.5
TRA2A-202ENST00000392502 PTGS1P23219 599 aa19.16■□□□□ 0.66
TRA2A-202ENST00000392502 PTPN14Q15678 1187 aa19.16■□□□□ 0.66
TRA2A-202ENST00000392502 TMCO3Q6UWJ1 677 aa19.16■□□□□ 0.66
TRA2A-202ENST00000392502 LCMT1Q9UIC8 334 aa19.16■□□□□ 0.66
TRA2A-202ENST00000392502 GNAT3A8MTJ3 354 aa19.15■□□□□ 0.66
TRA2A-202ENST00000392502 ACTN2P35609 894 aa19.15■□□□□ 0.66
TRA2A-202ENST00000392502 GTF3C6Q969F1 213 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms