RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 IQSEC3Q9UPP2 1182 aaPredicted RBP15.28■□□□□ 0.04
ERCC2-204ENST00000391945 MTMR7Q9Y216 660 aa15.28■□□□□ 0.04
ERCC2-204ENST00000391945 KDRP35968 1356 aa15.28■□□□□ 0.04
ERCC2-204ENST00000391945 CHAF1AQ13111 956 aaPredicted RBP15.28■□□□□ 0.04
ERCC2-204ENST00000391945 GNL3LQ9NVN8 582 aaKnown RBP15.28■□□□□ 0.04
ERCC2-204ENST00000391945 RAI14Q9P0K7 980 aa15.28■□□□□ 0.04
ERCC2-204ENST00000391945 SSFA2P28290 1259 aa15.28■□□□□ 0.04
ERCC2-204ENST00000391945 IL15P40933 162 aaPredicted RBP15.28■□□□□ 0.04
ERCC2-204ENST00000391945 FAM182BQ5T319 152 aa15.27■□□□□ 0.04
ERCC2-204ENST00000391945 CWC22Q9HCG8 908 aaKnown RBP15.27■□□□□ 0.04
ERCC2-204ENST00000391945 TNS3Q68CZ2 1445 aa15.27■□□□□ 0.04
ERCC2-204ENST00000391945 SLIT1O75093 1534 aa15.27■□□□□ 0.04
ERCC2-204ENST00000391945 HCLS1P14317 486 aaPredicted RBP15.27■□□□□ 0.03
ERCC2-204ENST00000391945 DBNDD2Q9BQY9 259 aa15.27■□□□□ 0.03
ERCC2-204ENST00000391945 USP26Q9BXU7 913 aa15.27■□□□□ 0.03
ERCC2-204ENST00000391945 CRB1P82279 1406 aa15.26■□□□□ 0.03
ERCC2-204ENST00000391945 TNPO1Q92973 898 aaKnown RBP15.26■□□□□ 0.03
ERCC2-204ENST00000391945 IFT172Q9UG01 1749 aa15.26■□□□□ 0.03
ERCC2-204ENST00000391945 KIF13AQ9H1H9 1805 aa15.26■□□□□ 0.03
ERCC2-204ENST00000391945 COL3A1P02461 1466 aaPredicted RBP15.26■□□□□ 0.03
ERCC2-204ENST00000391945 ATP2B3Q16720 1220 aa15.26■□□□□ 0.03
ERCC2-204ENST00000391945 SMARCC1Q92922 1105 aaPredicted RBP15.26■□□□□ 0.03
ERCC2-204ENST00000391945 AKAP17AQ02040 695 aaKnown RBP15.26■□□□□ 0.03
ERCC2-204ENST00000391945 CCDC191Q8NCU4 936 aa15.26■□□□□ 0.03
ERCC2-204ENST00000391945 RNF214Q8ND24 703 aa15.26■□□□□ 0.03
ERCC2-204ENST00000391945 ERICH2A1L162 156 aa15.25■□□□□ 0.03
ERCC2-204ENST00000391945 PPFIA3O75145 1194 aa15.25■□□□□ 0.03
ERCC2-204ENST00000391945 HAND2P61296 217 aa15.25■□□□□ 0.03
ERCC2-204ENST00000391945 KLHL34Q8N239 644 aa15.25■□□□□ 0.03
ERCC2-204ENST00000391945 DDX11Q96FC9 970 aa15.25■□□□□ 0.03
ERCC2-204ENST00000391945 NMIQ13287 307 aaPredicted RBP15.25■□□□□ 0.03
ERCC2-204ENST00000391945 FERMT3Q86UX7 667 aa15.25■□□□□ 0.03
ERCC2-204ENST00000391945 AIDAQ96BJ3 306 aa15.25■□□□□ 0.03
ERCC2-204ENST00000391945 EDC3Q96F86 508 aaKnown RBP15.25■□□□□ 0.03
ERCC2-204ENST00000391945 AK7Q96M32 723 aa15.25■□□□□ 0.03
ERCC2-204ENST00000391945 CIZ1Q9ULV3 898 aaPredicted RBP15.25■□□□□ 0.03
ERCC2-204ENST00000391945 MRE11P49959 708 aa15.25■□□□□ 0.03
ERCC2-204ENST00000391945 KCNQ4P56696 695 aa15.25■□□□□ 0.03
ERCC2-204ENST00000391945 CEBPZQ03701 1054 aaKnown RBP15.25■□□□□ 0.03
ERCC2-204ENST00000391945 BICD2Q8TD16 824 aa15.25■□□□□ 0.03
ERCC2-204ENST00000391945 TTC41PQ6P2S7 1318 aa15.25■□□□□ 0.03
ERCC2-204ENST00000391945 RAD21O60216 631 aa15.25■□□□□ 0.03
ERCC2-204ENST00000391945 LARP1BQ659C4 914 aaKnown RBP15.25■□□□□ 0.03
ERCC2-204ENST00000391945 RFC4P35249 363 aa15.24■□□□□ 0.03
ERCC2-204ENST00000391945 NBPF5PQ86XG9 351 aaPredicted RBP15.24■□□□□ 0.03
ERCC2-204ENST00000391945 CHMP4CQ96CF2 233 aa15.24■□□□□ 0.03
ERCC2-204ENST00000391945 ZSCAN25Q6NSZ9 544 aa15.24■□□□□ 0.03
ERCC2-204ENST00000391945 RBM8AQ9Y5S9 174 aaKnown RBP15.24■□□□□ 0.03
ERCC2-204ENST00000391945 KDM4FA0A1W2PPD8 638 aa15.24■□□□□ 0.03
ERCC2-204ENST00000391945 CCDC24Q8N4L8 307 aa15.24■□□□□ 0.03
ERCC2-204ENST00000391945 PIGBQ92521 554 aa15.24■□□□□ 0.03
ERCC2-204ENST00000391945 EAF2Q96CJ1 260 aaPredicted RBP15.24■□□□□ 0.03
ERCC2-204ENST00000391945 SLC5A1P13866 664 aa15.23■□□□□ 0.03
ERCC2-204ENST00000391945 TDO2P48775 406 aa15.23■□□□□ 0.03
ERCC2-204ENST00000391945 DRC7Q8IY82 874 aa15.23■□□□□ 0.03
ERCC2-204ENST00000391945 CDCA7Q9BWT1 371 aaPredicted RBP15.23■□□□□ 0.03
ERCC2-204ENST00000391945 USP21Q9UK80 565 aa15.23■□□□□ 0.03
ERCC2-204ENST00000391945 CPA1P15085 419 aa15.23■□□□□ 0.03
ERCC2-204ENST00000391945 TMX3Q96JJ7 454 aa15.23■□□□□ 0.03
ERCC2-204ENST00000391945 UBR1Q8IWV7 1749 aa15.23■□□□□ 0.03
ERCC2-204ENST00000391945 KRT32Q14532 448 aa15.23■□□□□ 0.03
ERCC2-204ENST00000391945 ANKRD1Q15327 319 aa15.23■□□□□ 0.03
ERCC2-204ENST00000391945 UTP14AQ9BVJ6 771 aaKnown RBP15.23■□□□□ 0.03
ERCC2-204ENST00000391945 TRIM29Q14134 588 aa15.22■□□□□ 0.03
ERCC2-204ENST00000391945 TNNI3KQ59H18 835 aa15.22■□□□□ 0.03
ERCC2-204ENST00000391945 AMOTL1Q8IY63 956 aa15.22■□□□□ 0.03
ERCC2-204ENST00000391945 LRRC2Q9BYS8 371 aa15.22■□□□□ 0.03
ERCC2-204ENST00000391945 ZBTB1Q9Y2K1 713 aa15.22■□□□□ 0.03
ERCC2-204ENST00000391945 FPGT-TNNI3KV9GXZ4 949 aa15.22■□□□□ 0.03
ERCC2-204ENST00000391945 EYA2O00167 538 aa15.22■□□□□ 0.03
ERCC2-204ENST00000391945 TULP1O00294 542 aaPredicted RBP15.22■□□□□ 0.03
ERCC2-204ENST00000391945 A0A1B0GUL7 405 aa15.22■□□□□ 0.03
ERCC2-204ENST00000391945 DTNBO60941 627 aa15.22■□□□□ 0.03
ERCC2-204ENST00000391945 TCIRG1Q13488 830 aa15.22■□□□□ 0.03
ERCC2-204ENST00000391945 UNC5CLQ8IV45 518 aa15.22■□□□□ 0.03
ERCC2-204ENST00000391945 ANKIB1Q9P2G1 1089 aa15.22■□□□□ 0.03
ERCC2-204ENST00000391945 CTNNA3Q9UI47 895 aa15.22■□□□□ 0.03
ERCC2-204ENST00000391945 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
ERCC2-204ENST00000391945 GNPATO15228 680 aa15.21■□□□□ 0.03
ERCC2-204ENST00000391945 IMMTQ16891 758 aaKnown RBP15.21■□□□□ 0.03
ERCC2-204ENST00000391945 CCDC152Q4G0S7 254 aa15.21■□□□□ 0.03
ERCC2-204ENST00000391945 FAM227BQ96M60 508 aa15.21■□□□□ 0.03
ERCC2-204ENST00000391945 SETDB2Q96T68 719 aa15.21■□□□□ 0.03
ERCC2-204ENST00000391945 LIMCH1Q9UPQ0 1083 aa15.21■□□□□ 0.03
ERCC2-204ENST00000391945 ITGA6P23229 1130 aa15.21■□□□□ 0.03
ERCC2-204ENST00000391945 RBM25P49756 843 aaKnown RBP15.21■□□□□ 0.03
ERCC2-204ENST00000391945 ITSN1Q15811 1721 aa15.21■□□□□ 0.03
ERCC2-204ENST00000391945 CDC5LQ99459 802 aaKnown RBP15.21■□□□□ 0.03
ERCC2-204ENST00000391945 NACAP1Q9BZK3 213 aa15.21■□□□□ 0.03
ERCC2-204ENST00000391945 WDR33Q9C0J8 1336 aaKnown RBP15.21■□□□□ 0.03
ERCC2-204ENST00000391945 C3P01024 1663 aa15.21■□□□□ 0.03
ERCC2-204ENST00000391945 IBTKQ9P2D0 1353 aaPredicted RBP15.21■□□□□ 0.03
ERCC2-204ENST00000391945 PDCP20941 246 aa15.21■□□□□ 0.03
ERCC2-204ENST00000391945 NASPP49321 788 aaPredicted RBP15.21■□□□□ 0.02
ERCC2-204ENST00000391945 CAVIN4Q5BKX8 364 aa15.21■□□□□ 0.02
ERCC2-204ENST00000391945 PAG1Q9NWQ8 432 aa15.21■□□□□ 0.02
ERCC2-204ENST00000391945 NECAB1Q8N987 351 aa15.2■□□□□ 0.02
ERCC2-204ENST00000391945 CCDC87Q9NVE4 849 aa15.2■□□□□ 0.02
ERCC2-204ENST00000391945 MINDY4BA8MYZ0 360 aa15.2■□□□□ 0.02
ERCC2-204ENST00000391945 ATP2B1P20020 1258 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms