RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 GOLGA6L9A6NEM1 432 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 RAB11FIP3O75154 756 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 TBCAO75347 108 aaKnown RBP6.7□□□□□ -1.34
RFX3-204ENST00000382004 CCDC172P0C7W6 258 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 PLCB3Q01970 1234 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 FLIIQ13045 1269 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 FAM212AQ96EL1 285 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 CCDC77Q9BR77 488 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 TTC12Q9H892 705 aaPredicted RBP6.7□□□□□ -1.34
RFX3-204ENST00000382004 MIS18AQ9NYP9 233 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 N4BP3O15049 544 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 PTCD1O75127 700 aaKnown RBP6.7□□□□□ -1.34
RFX3-204ENST00000382004 HSP90AA4PQ58FG1 418 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 RAB11FIP4Q86YS3 637 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 KIF1BPQ96EK5 621 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 SEC62Q99442 399 aaKnown RBP6.7□□□□□ -1.34
RFX3-204ENST00000382004 AKNAQ7Z591 1439 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 ARID5AQ03989 594 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 PRAM1Q96QH2 718 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 KCNK9Q9NPC2 374 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 CCDC129Q6ZRS4 1044 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 RPGRQ92834 1020 aaKnown RBP6.7□□□□□ -1.34
RFX3-204ENST00000382004 MYD88Q99836 296 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 GRM1Q13255 1194 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 TTF1Q15361 905 aaPredicted RBP6.7□□□□□ -1.34
RFX3-204ENST00000382004 DNAJC21Q5F1R6 531 aaKnown RBP6.7□□□□□ -1.34
RFX3-204ENST00000382004 CCDC25Q86WR0 208 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 GEN1Q17RS7 908 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 TXNDC2Q86VQ3 553 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 EHBP1Q8NDI1 1231 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 CCT6BQ92526 530 aa6.7□□□□□ -1.34
RFX3-204ENST00000382004 CRCPO75575 148 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 ZFYP08048 801 aaPredicted RBP6.69□□□□□ -1.34
RFX3-204ENST00000382004 SLC5A1P13866 664 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 FAM160A1Q05DH4 1040 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 STMN4Q9H169 189 aaPredicted RBP6.69□□□□□ -1.34
RFX3-204ENST00000382004 STIM2Q9P246 746 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 ZEB2O60315 1214 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 GLRX3O76003 335 aaKnown RBP6.69□□□□□ -1.34
RFX3-204ENST00000382004 KIF5BP33176 963 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 PDE1CQ14123 709 aaPredicted RBP6.69□□□□□ -1.34
RFX3-204ENST00000382004 TRIM7Q9C029 511 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 CCDC8Q9H0W5 538 aaPredicted RBP6.69□□□□□ -1.34
RFX3-204ENST00000382004 ARFGAP3Q9NP61 516 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 PRDM11Q9NQV5 511 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 SH2B1Q9NRF2 756 aaPredicted RBP6.69□□□□□ -1.34
RFX3-204ENST00000382004 C11orf95C9JLR9 678 aaPredicted RBP6.69□□□□□ -1.34
RFX3-204ENST00000382004 KIF5AQ12840 1032 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 TMEM67Q5HYA8 995 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 GBP7Q8N8V2 638 aaPredicted RBP6.69□□□□□ -1.34
RFX3-204ENST00000382004 SPAG5Q96R06 1193 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 FAM169AQ9Y6X4 670 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 ATP2A1O14983 1001 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 ECM2O94769 699 aaPredicted RBP6.69□□□□□ -1.34
RFX3-204ENST00000382004 OPA1O60313 960 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 IVLP07476 585 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 HMGB1P09429 215 aaKnown RBP6.69□□□□□ -1.34
RFX3-204ENST00000382004 SSFA2P28290 1259 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 AFMP43652 599 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 HAUS7Q99871 368 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 RNF41Q9H4P4 317 aaPredicted RBP6.69□□□□□ -1.34
RFX3-204ENST00000382004 MX1P20591 662 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 RRS1Q15050 365 aaKnown RBP6.69□□□□□ -1.34
RFX3-204ENST00000382004 CPLX4Q7Z7G2 160 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 KAT14Q9H8E8 782 aa6.69□□□□□ -1.34
RFX3-204ENST00000382004 UBASH3AP57075 661 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 SLF2Q8IX21 1173 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 CDK19Q9BWU1 502 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 SIRT1Q96EB6 747 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 TTC14Q96N46 770 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 SLC26A6Q9BXS9 759 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 DDX19AQ9NUU7 478 aaKnown RBP6.68□□□□□ -1.34
RFX3-204ENST00000382004 TSPY2A6NKD2 308 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 C6orf229H3BNL8 230 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 CYLC1P35663 651 aaPredicted RBP6.68□□□□□ -1.34
RFX3-204ENST00000382004 PSMD6Q15008 389 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 ATP2B3Q16720 1220 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 TTC31Q49AM3 519 aaPredicted RBP6.68□□□□□ -1.34
RFX3-204ENST00000382004 KRT222Q8N1A0 295 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 CAPZA3Q96KX2 299 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 CCDC114Q96M63 670 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 MPHOSPH6Q99547 160 aaKnown RBP6.68□□□□□ -1.34
RFX3-204ENST00000382004 RBM27Q9P2N5 1060 aaKnown RBP6.68□□□□□ -1.34
RFX3-204ENST00000382004 IFIT5Q13325 482 aaKnown RBP6.68□□□□□ -1.34
RFX3-204ENST00000382004 UAP1Q16222 522 aaPredicted RBP6.68□□□□□ -1.34
RFX3-204ENST00000382004 TAF12Q16514 161 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 AKNAD1Q5T1N1 836 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 TMEM57Q8N5G2 664 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 USP16Q9Y5T5 823 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 TLDC2A0PJX2 215 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 GJB2P29033 226 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 FAM69CQ0P6D2 419 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 MICU3Q86XE3 530 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 CCDC65Q8IXS2 484 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 CTAGE15A4D2H0 777 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 CTAGE8P0CG41 777 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 IRX5P78411 483 aaPredicted RBP6.68□□□□□ -1.34
RFX3-204ENST00000382004 RRAGBQ5VZM2 374 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 CTAGE6Q86UF2 777 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 CTAGE4Q8IX94 777 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms